Chromosome and Associated Proteins - Sus scrofa (pig)

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     KO
 Eukaryotic type
   Sister chromatid cohesion proteins
   Meiosis-specific proteins
   Nucleosome assembly factors
   Histone modification proteins
     HATs (histone acetyltransferases)
     HAT complexes
     HDACs (histone deacetylases)
     HDAC complexes
     HMTs (histone methyltransferases)
       HKMTs (histone lysine methyltransferases)
         100155920 ASH1L; histone-lysine N-methyltransferase ASH1L isoform X1
         100738665 DOT1L; histone-lysine N-methyltransferase, H3 lysine-79 specific isoform X1
         100124382 EHMT2; histone-lysine N-methyltransferase EHMT2
         110258080 EHMT1; histone-lysine N-methyltransferase EHMT1 isoform X1
         100518394 EZH1; histone-lysine N-methyltransferase EZH1
         100625497 EZH2; histone-lysine N-methyltransferase EZH2
         100623006 KMT2A; histone-lysine N-methyltransferase 2A isoform X1
         110260656 KMT2D; LOW QUALITY PROTEIN: histone-lysine N-methyltransferase 2D
         100514805 KMT2C; histone-lysine N-methyltransferase 2C isoform X1
         100520742 KMT2B; LOW QUALITY PROTEIN: histone-lysine N-methyltransferase 2B
         100628131 KMT2E; histone-lysine N-methyltransferase 2E isoform X1
         100524976 NSD1; histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific isoform X1
         100515039 NSD2; histone-lysine N-methyltransferase NSD2 isoform X1
         100520868 NSD3; histone-lysine N-methyltransferase NSD3 isoform X3
         100518559 PRDM2; LOW QUALITY PROTEIN: PR domain zinc finger protein 2
         100518275 MECOM; MDS1 and EVI1 complex locus protein EVI1 isoform X1
         100524509 PRDM6; putative histone-lysine N-methyltransferase PRDM6 isoform X1
         100620538 PRDM7; probable histone-lysine N-methyltransferase PRDM7
         102165745 ZNF488; zinc finger protein 488
         100514243 PRDM8; PR domain zinc finger protein 8 isoform X1
         100522920 PRDM12; PR domain zinc finger protein 12
         100624476 PRDM16; LOW QUALITY PROTEIN: PR domain zinc finger protein 16
         100511747 SETD1A; LOW QUALITY PROTEIN: histone-lysine N-methyltransferase SETD1A
         100156137 SETD1B; LOW QUALITY PROTEIN: histone-lysine N-methyltransferase SETD1B
         100623101 SETD2; LOW QUALITY PROTEIN: histone-lysine N-methyltransferase SETD2
         100622154 SETD4; SET domain-containing protein 4
         100626287 SETD6; LOW QUALITY PROTEIN: N-lysine methyltransferase SETD6
         100626704 SETD7; histone-lysine N-methyltransferase SETD7 isoform X3
         100626555 KMT5A; N-lysine methyltransferase KMT5A isoform X1
         100157920 SETDB1; histone-lysine N-methyltransferase SETDB1 isoform X1
         100157885 SETDB2; histone-lysine N-methyltransferase SETDB2 isoform X2
         100514009 histone-lysine N-methyltransferase SETMAR
         100294702 SMYD1; histone-lysine N-methyltransferase SMYD1
         100294706 SMYD2; N-lysine methyltransferase SMYD2
         100294707 SMYD3; histone-lysine N-methyltransferase SMYD3
         664651 SUV39H2; histone-lysine N-methyltransferase SUV39H2
         767626 SUV39H1; histone-lysine N-methyltransferase SUV39H1 isoform X1
         100521358 KMT5B; histone-lysine N-methyltransferase KMT5B isoform X1
         110261054 KMT5C; histone-lysine N-methyltransferase KMT5C isoform X1
K06101 ASH1L; [histone H3]-lysine4 N-trimethyltransferase ASH1L [EC:2.1.1.354] 
K11427 DOT1L; [histone H3]-lysine79 N-trimethyltransferase [EC:2.1.1.360] 
K11420 EHMT; [histone H3]-lysine9 N-trimethyltransferase EHMT [EC:2.1.1.355] 
K11420 EHMT; [histone H3]-lysine9 N-trimethyltransferase EHMT [EC:2.1.1.355] 
K17451 EZH1; [histone H3]-lysine27 N-trimethyltransferase EZH1 [EC:2.1.1.356] 
K11430 EZH2; [histone H3]-lysine27 N-trimethyltransferase EZH2 [EC:2.1.1.356] 
K09186 MLL1; [histone H3]-lysine4 N-trimethyltransferase MLL1 [EC:2.1.1.354] 
K09187 MLL2; [histone H3]-lysine4 N-trimethyltransferase MLL2 [EC:2.1.1.354] 
K09188 MLL3; [histone H3]-lysine4 N-trimethyltransferase MLL3 [EC:2.1.1.354] 
K14959 MLL4; [histone H3]-lysine4 N-trimethyltransferase MLL4 [EC:2.1.1.354] 
K09189 MLL5; [histone H3]-lysine4 N-trimethyltransferase MLL5 [EC:2.1.1.354] 
K15588 NSD1; [histone H3]-lysine36 N-dimethyltransferase NSD1 [EC:2.1.1.357] 
K11424 WHSC1; [histone H3]-lysine36 N-dimethyltransferase NSD2 [EC:2.1.1.357] 
K11425 WHSC1L1; [histone H3]-lysine4 N-dimethyltransferase / [histone H3]-lysine27 N-dimethyltransferase [EC:2.1.1.370 2.1.1.371] 
K11432 PRDM2; [histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:2.1.1.355] 
K04462 MECOM; [histone H3]-lysine9 N-methyltransferase (ecotropic virus integration site 1 protein) [EC:2.1.1.367] 
K20795 PRDM6; [histone H4]-lysine20 N-methyltransferase PRDM6 [EC:2.1.1.361] 
K20796 PRDM7_9; [histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:2.1.1.354] 
K20797 PRDM8; PR domain zinc finger protein 8 [EC:2.1.1.-] 
K20797 PRDM8; PR domain zinc finger protein 8 [EC:2.1.1.-] 
K24255 PRDM12; PR domain zinc finger protein 12 [EC:2.1.1.-] 
K22410 PRDM16; [histone H3]-lysine9 N-methyltransferase [EC:2.1.1.367] 
K11422 SETD1; [histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:2.1.1.354] 
K11422 SETD1; [histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:2.1.1.354] 
K11423 SETD2; [histone H3]-lysine36 N-trimethyltransferase [EC:2.1.1.359] 
K27277 SETD4; SET domain-containing protein 4 [EC:2.1.1.- 2.1.1.364] 
K05302 SETD6; N-lysine methyltransferase SETD6 [EC:2.1.1.-] 
K11431 SETD7; [histone H3]-lysine4 N-methyltransferase [EC:2.1.1.364] 
K11428 SETD8; [histone H4]-lysine20 N-methyltransferase SETD8 [EC:2.1.1.361] 
K11421 SETDB1; [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:2.1.1.366] 
K18494 SETDB2; [histone H3]-lysine9 N-trimethyltransferase SETDB2 [EC:2.1.1.355] 
K11433 SETMAR; [histone H3]-lysine36 N-dimethyltransferase SETMAR [EC:2.1.1.357] 
K11426 SMYD; [histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:2.1.1.354 2.1.1.357] 
K11426 SMYD; [histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:2.1.1.354 2.1.1.357] 
K11426 SMYD; [histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:2.1.1.354 2.1.1.357] 
K11419 SUV39H; [histone H3]-lysine9 N-trimethyltransferase SUV39H [EC:2.1.1.355] 
K11419 SUV39H; [histone H3]-lysine9 N-trimethyltransferase SUV39H [EC:2.1.1.355] 
K11429 SUV420H; [histone H4]-N-methyl-L-lysine20 N-methyltransferase [EC:2.1.1.362] 
K11429 SUV420H; [histone H4]-N-methyl-L-lysine20 N-methyltransferase [EC:2.1.1.362] 
       PRMTs (protein arginine metyltransferases)
     HMT complexes
       COMPASS/SET1 complex
       COMPASS/SET1 complex (yeast)
       MLL-HCF complex
       MLL3/MLL4 complex
         100514805 KMT2C; histone-lysine N-methyltransferase 2C isoform X1
         100520742 KMT2B; LOW QUALITY PROTEIN: histone-lysine N-methyltransferase 2B
         100627423 ASH2L; set1/Ash2 histone methyltransferase complex subunit ASH2
         100514043 DPY30; protein dpy-30 homolog
         100513301 RBBP5; retinoblastoma-binding protein 5 isoform X1
         100156729 WDR5; WD repeat-containing protein 5
         100627452 WDR5B; WD repeat-containing protein 5B
         100156283 NCOA6; nuclear receptor coactivator 6 isoform X1
         100621300 PAXIP1; PAX-interacting protein 1 isoform X1
         100622905 PAGR1; PAXIP1-associated glutamate-rich protein 1
         100154376 KDM6A; lysine-specific demethylase 6A isoform X1
         110255320 lysine-specific demethylase 6A-like isoform X1
K09188 MLL3; [histone H3]-lysine4 N-trimethyltransferase MLL3 [EC:2.1.1.354] 
K14959 MLL4; [histone H3]-lysine4 N-trimethyltransferase MLL4 [EC:2.1.1.354] 
K14964 ASH2; Set1/Ash2 histone methyltransferase complex subunit ASH2 
K14965 DPY30; protein dpy-30 
K14961 RBBP5; COMPASS component SWD1 
K14963 WDR5; COMPASS component SWD3 
K14963 WDR5; COMPASS component SWD3 
K14971 NCOA6; nuclear receptor coactivator 6 
K14972 PAXIP1; PAX-interacting protein 1 
K14973 PA1; PAXIP1-associated protein 1 
K11447 UTX; lysine-specific demethylase 6A [EC:1.14.11.68] 
K11447 UTX; lysine-specific demethylase 6A [EC:1.14.11.68] 
       Dot1-containing complex
     Histone demethylases
     Polycomb repressive complex (PRC) and associated proteins
     Sir proteins
     Other histone modification proteins
   Chromosome condensation proteins
   Centromeric chromatin formation proteins
   Heterochromatin formation proteins
   Gene silencing
   Centrosome formation proteins
   Sister chromatid separation proteins
   Chromatin remodeling factors
 
 Prokaryotic type

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Last updated: March 14, 2024