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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:ssg03030]
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03410 Base excision repair [PATH:ssg03410]
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03420 Nucleotide excision repair [PATH:ssg03420]
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03430 Mismatch repair [PATH:ssg03430]
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03440 Homologous recombination [PATH:ssg03440]
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 Selsp_0761 single-stranded-DNA-specific exonuclease RecJ
Selsp_2087 single-strand binding protein
Selsp_1347 single-strand binding protein
Selsp_0004 DNA replication and repair protein RecF
Selsp_1563 DNA repair protein RecO
Selsp_0019 recombination protein RecR
Selsp_0622 recA protein
Selsp_1087 Holliday junction DNA helicase RuvA
Selsp_1088 Holliday junction DNA helicase RuvB
Selsp_1086 crossover junction endodeoxyribonuclease RuvC
Selsp_0406 putative transcriptional regulator
Selsp_0730 putative transcriptional regulator
Selsp_0820 ATP-dependent DNA helicase RecG
Selsp_1579 transcriptional regulator, MarR family
Selsp_0355 helicase, RecD/TraA family
Selsp_1252 DNA polymerase III, alpha subunit
Selsp_1098 DNA polymerase III, alpha subunit
Selsp_2099 DNA polymerase III alpha subunit
Selsp_0003 DNA polymerase III, beta subunit
Selsp_0017 DNA polymerase III, subunits gamma and tau
Selsp_1180 DNA polymerase III, delta subunit
Selsp_1795 AAA ATPase central domain protein
Selsp_0842 Exonuclease RNase T and DNA polymerase III
Selsp_1440 primosomal protein N'
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:ssg03000]
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03021 Transcription machinery [BR:ssg03021]
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03019 Messenger RNA biogenesis [BR:ssg03019]
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03041 Spliceosome
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03011 Ribosome [BR:ssg03011]
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03009 Ribosome biogenesis [BR:ssg03009]
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03016 Transfer RNA biogenesis [BR:ssg03016]
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03012 Translation factors [BR:ssg03012]
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03110 Chaperones and folding catalysts [BR:ssg03110]
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04131 Membrane trafficking [BR:ssg04131]
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04121 Ubiquitin system
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03051 Proteasome [BR:ssg03051]
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03032 DNA replication proteins [BR:ssg03032]
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03036 Chromosome and associated proteins [BR:ssg03036]
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03400 DNA repair and recombination proteins [BR:ssg03400]
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Selsp_0666 methylated-DNA/protein-cysteinemethyltransferase
Selsp_0639 methylated-DNA/protein-cysteinemethyltransferase
Selsp_0084 Uracil-DNA glycosylase
Selsp_1217 A/G-specific adenine glycosylase
Selsp_0993 endonuclease III
Selsp_0459 NUDIX hydrolase
Selsp_1271 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
Selsp_1755 HhH-GPD family protein
Selsp_1096 formamidopyrimidine-DNA glycosylase
Selsp_0700 exodeoxyribonuclease III
Selsp_1171 apurinic endonuclease Apn1
Selsp_0761 single-stranded-DNA-specific exonuclease RecJ
Selsp_1140 DNA ligase, NAD-dependent
Selsp_1792 excinuclease ABC, A subunit
Selsp_0871 excinuclease ABC, B subunit
Selsp_0619 UvrABC system protein C
Selsp_1139 ATP-dependent DNA helicase PcrA
Selsp_0998 DNA-directed RNA polymerase, beta subunit
Selsp_0999 DNA-directed RNA polymerase subunit beta'
Selsp_1463 DNA-directed RNA polymerase, alpha subunit
Selsp_1427 DNA-directed RNA polymerase delta subunit
Selsp_1621 DNA-directed RNA polymerase, omega subunit
Selsp_0878 transcription-repair coupling factor
Selsp_1100 DNA mismatch repair protein MutS
Selsp_1082 MutS2 family protein
Selsp_1101 DNA mismatch repair protein MutL
Selsp_1069 Exodeoxyribonuclease 7 large subunit
Selsp_1070 Exodeoxyribonuclease 7 small subunit
Selsp_1252 DNA polymerase III, alpha subunit
Selsp_1098 DNA polymerase III, alpha subunit
Selsp_2099 DNA polymerase III alpha subunit
Selsp_0003 DNA polymerase III, beta subunit
Selsp_1180 DNA polymerase III, delta subunit
Selsp_1795 AAA ATPase central domain protein
Selsp_0842 Exonuclease RNase T and DNA polymerase III
Selsp_0017 DNA polymerase III, subunits gamma and tau
Selsp_2087 single-strand binding protein
Selsp_1347 single-strand binding protein
Selsp_0127 DNA adenine methylase
Selsp_0625 DNA adenine methylase
Selsp_0355 helicase, RecD/TraA family
Selsp_0622 recA protein
Selsp_1087 Holliday junction DNA helicase RuvA
Selsp_1088 Holliday junction DNA helicase RuvB
Selsp_1086 crossover junction endodeoxyribonuclease RuvC
Selsp_1440 primosomal protein N'
Selsp_0686 SMC domain protein
Selsp_0685 nuclease SbcCD, D subunit
Selsp_0381 DNA repair protein RadA
Selsp_0004 DNA replication and repair protein RecF
Selsp_0406 putative transcriptional regulator
Selsp_0730 putative transcriptional regulator
Selsp_0820 ATP-dependent DNA helicase RecG
Selsp_1579 transcriptional regulator, MarR family
Selsp_1563 DNA repair protein RecO
Selsp_0019 recombination protein RecR
Selsp_1076 DNA repair protein RecN
Selsp_1195 recombination helicase AddA
Selsp_1196 ATP-dependent nuclease subunit B
Selsp_1976 CRISPR-associated protein Cas1
Selsp_1983 DNA gyrase, A subunit
Selsp_0007 DNA gyrase, B subunit
Selsp_1742 DNA topoisomerase I
Selsp_0880 histone family protein DNA-binding protein
Selsp_1352 RecT protein
Selsp_1555 ATP-dependent DNA helicase RecQ
Selsp_2183 DNA-directed DNA polymerase
Selsp_0956 SOS-response transcriptional repressor, LexA
Selsp_0623 regulatory protein RecX
Selsp_0350 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
Selsp_1150 phosphoesterase RecJ domain protein
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03048 rpoE; DNA-directed RNA polymerase subunit delta
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
K15342 cas1; CRISP-associated protein Cas1
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K07455 recT; recombination protein RecT
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03565 recX; regulatory protein
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
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03029 Mitochondrial biogenesis [BR:ssg03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Selenomonas sputigena