DNA Repair and Recombination Proteins - Salmonella enterica subsp. enterica serovar Typhimurium LT2

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     KO
 Eukaryotic type
 
 Prokaryotic type
   SSBR (single strand breaks repair)
   DSBR (double strand breaks repair)
     HR (homologous recombination)
       RecBC pathway proteins
         STM2994 recB; exodeoxyribonuclease V subunit beta
         STM2996 recC; exodeoxyribonuclease V subunit gamma
         STM2993 recD; exodeoxyribonuclease V subunit alpha
         STM2829 recA; recombinase RecA
         STM1895 ruvA; Holliday junction DNA helicase RuvA
         STM1894 ruvB; Holliday junction DNA helicase RuvB
         STM1898 ruvC; crossover junction endodeoxyribonuclease RuvC
         STM4095 priA; factor Y
         STM4392 priB; primosomal replication protein N
         STM0481 priC; primosomal replication protein N
         STM4544 dnaT; primosomal protein DnaI
         STM2067 sbcB; exodeoxyribonuclease I
         STM0395 sbcC; exonuclease subunit SbcC
         STM0396 sbcD; exonuclease subunit SbcD
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] 
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] 
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] 
K03553 recA; recombination protein RecA 
K03550 ruvA; holliday junction DNA helicase RuvA 
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] 
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] 
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] 
K02686 priB; primosomal replication protein N 
K04067 priC; primosomal replication protein N'' 
K02317 dnaT; DNA replication protein DnaT 
K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] 
K03546 sbcC; DNA repair protein SbcC/Rad50 
K03547 sbcD; DNA repair protein SbcD/Mre11 
       RecFOR pathway proteins
         STM2829 recA; recombinase RecA
         STM4579 radA; DNA repair protein RadA
         STM3836 recF; DNA replication/repair protein RecF
         STM3744 recG; ATP-dependent DNA helicase RecG
         STM3042 recJ; single-stranded-DNA-specific exonuclease RecJ
         STM2579 recO; DNA repair protein RecO
         STM0486 recR; recombination protein RecR
         STM2684 recN; DNA repair protein RecN
         STM0392 rdgC; recombination-associated protein RdgC
         STM1895 ruvA; Holliday junction DNA helicase RuvA
         STM1894 ruvB; Holliday junction DNA helicase RuvB
         STM1898 ruvC; crossover junction endodeoxyribonuclease RuvC
K03553 recA; recombination protein RecA 
K04485 radA; DNA repair protein RadA/Sms 
K03629 recF; DNA replication and repair protein RecF 
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] 
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] 
K03584 recO; DNA repair protein RecO (recombination protein O) 
K06187 recR; recombination protein RecR 
K03631 recN; DNA repair protein RecN (Recombination protein N) 
K03554 rdgC; recombination associated protein RdgC 
K03550 ruvA; holliday junction DNA helicase RuvA 
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] 
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] 
       AddAB pathway proteins
       Other HR factor
       Archaeal homologous recombinant proteins
     NHEJ (non-homologous end-joining)
   TLS (translesion DNA synthesis) factors
   Other factors with a suspected DNA repair function

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Last updated: March 29, 2024