KEGG Orthology (KO) - Shewanella woodyi

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 09100 Metabolism

 





   09101 Carbohydrate metabolism





     00010 Glycolysis / Gluconeogenesis [PATH:swd00010]





     00020 Citrate cycle (TCA cycle) [PATH:swd00020]





     00030 Pentose phosphate pathway [PATH:swd00030]





     00040 Pentose and glucuronate interconversions [PATH:swd00040]





     00051 Fructose and mannose metabolism [PATH:swd00051]





     00052 Galactose metabolism [PATH:swd00052]





     00053 Ascorbate and aldarate metabolism [PATH:swd00053]





     00500 Starch and sucrose metabolism [PATH:swd00500]





     00520 Amino sugar and nucleotide sugar metabolism [PATH:swd00520]





     00620 Pyruvate metabolism [PATH:swd00620]





       Swoo_2725 acetate--CoA ligase
       Swoo_1137 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein
       Swoo_1138 thiamine pyrophosphate protein domain protein TPP-binding
       Swoo_0319 2-oxo-acid dehydrogenase E1 subunit, homodimeric type
       Swoo_0320 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase
       Swoo_0321 dihydrolipoamide dehydrogenase
       Swoo_2883 formate acetyltransferase
       Swoo_2241 iron-containing alcohol dehydrogenase
       Swoo_1391 acetaldehyde dehydrogenase (acetylating)
       Swoo_1359 iron-containing alcohol dehydrogenase
       Swoo_0375 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase
       Swoo_2255 PQQ-dependent dehydrogenase, methanol/ethanol family
       Swoo_2886 acetate kinase
       Swoo_2887 phosphate acetyltransferase
       Swoo_2541 pyruvate kinase
       Swoo_0545 acetyl-CoA carboxylase, biotin carboxyl carrier protein
       Swoo_0544 acetyl-CoA carboxylase, biotin carboxylase
       Swoo_1809 acylphosphatase
       Swoo_2254 Aldehyde Dehydrogenase
       Swoo_0923 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
       Swoo_3368 Glyoxalase/bleomycin resistance protein/dioxygenase
       Swoo_2563 lactoylglutathione lyase
       Swoo_3214 Glyoxalase/bleomycin resistance protein/dioxygenase
       Swoo_2611 hydroxyacylglutathione hydrolase
       Swoo_2954 beta-lactamase domain protein
       Swoo_2968 ThiJ/PfpI domain protein
       Swoo_0902 Malate dehydrogenase (oxaloacetate-decarboxylating)
       Swoo_4423 Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+))
       Swoo_3336 oxaloacetate decarboxylase alpha subunit
       Swoo_1740 Conserved carboxylase region
       Swoo_1741 sodium ion-translocating decarboxylase, beta subunit
       Swoo_3335 sodium ion-translocating decarboxylase, beta subunit
       Swoo_3337 sodium pump decarboxylase, gamma subunit
       Swoo_1002 malate dehydrogenase, NAD-dependent
       Swoo_2227 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit
       Swoo_4264 fumarate lyase
       Swoo_0509 succinate dehydrogenase or fumarate reductase, flavoprotein subunit
       Swoo_0510 succinate dehydrogenase and fumarate reductase iron-sulfur protein
       Swoo_0507 fumarate reductase respiratory complex transmembrane subunit
       Swoo_0508 fumarate reductase respiratory complex transmembrane subunit
       Swoo_3776 flavocytochrome c
       Swoo_0327 Phosphoenolpyruvate carboxylase
       Swoo_4740 Phosphoenolpyruvate carboxykinase (ATP)
       Swoo_2715 phosphoenolpyruvate synthase
       Swoo_2236 malate synthase G
       Swoo_1528 Malate synthase
       Swoo_3202 acetyl-CoA acetyltransferase
       Swoo_4550 2-isopropylmalate synthase



K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87]
K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
K00925 ackA; acetate kinase [EC:2.7.2.1]
K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
K00873 PK; pyruvate kinase [EC:2.7.1.40]
K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
K01512 acyP; acylphosphatase [EC:3.6.1.7]
K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
K05523 hchA; D-lactate dehydratase / protein deglycase [EC:4.2.1.130 3.5.1.124]
K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
K25996 frdC; succinate dehydrogenase subunit C
K25996 frdC; succinate dehydrogenase subunit C
K26318 fccA; fumarate reductase (cytochrome) [EC:1.3.2.4]
K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
K01638 aceB; malate synthase [EC:2.3.3.9]
K01638 aceB; malate synthase [EC:2.3.3.9]
K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]





     00630 Glyoxylate and dicarboxylate metabolism [PATH:swd00630]





     00640 Propanoate metabolism [PATH:swd00640]





     00650 Butanoate metabolism [PATH:swd00650]





       Swoo_3202 acetyl-CoA acetyltransferase
       Swoo_0214 3-hydroxyacyl-CoA dehydrogenase NAD-binding
       Swoo_0021 fatty oxidation complex, alpha subunit FadB
       Swoo_3026 fatty acid oxidation complex, alpha subunit FadJ
       Swoo_3107 Trans-2-enoyl-CoA reductase (NAD(+))
       Swoo_2241 iron-containing alcohol dehydrogenase
       Swoo_1391 acetaldehyde dehydrogenase (acetylating)
       Swoo_1741 sodium ion-translocating decarboxylase, beta subunit
       Swoo_3335 sodium ion-translocating decarboxylase, beta subunit
       Swoo_0109 Asp/Glu/hydantoin racemase
       Swoo_1835 succinate dehydrogenase, flavoprotein subunit
       Swoo_1836 succinate dehydrogenase and fumarate reductase iron-sulfur protein
       Swoo_1833 succinate dehydrogenase, cytochrome b556 subunit
       Swoo_1834 succinate dehydrogenase, hydrophobic membrane anchor protein
       Swoo_0509 succinate dehydrogenase or fumarate reductase, flavoprotein subunit
       Swoo_0510 succinate dehydrogenase and fumarate reductase iron-sulfur protein
       Swoo_0507 fumarate reductase respiratory complex transmembrane subunit
       Swoo_0508 fumarate reductase respiratory complex transmembrane subunit
       Swoo_3776 flavocytochrome c
       Swoo_4739 glutamate decarboxylase
       Swoo_3862 4-aminobutyrate aminotransferase
       Swoo_3863 succinic semialdehyde dehydrogenase
       Swoo_2883 formate acetyltransferase
       Swoo_1137 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein
       Swoo_1138 thiamine pyrophosphate protein domain protein TPP-binding
       Swoo_3227 pyruvate carboxyltransferase
       Swoo_3228 3-oxoacid CoA-transferase, A subunit
       Swoo_3229 3-oxoacid CoA-transferase, B subunit
       Swoo_1955 acetolactate synthase, large subunit, biosynthetic type
       Swoo_0442 acetolactate synthase, large subunit, biosynthetic type
       Swoo_1954 acetolactate synthase, small subunit
       Swoo_0443 amino acid-binding ACT domain protein



K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87]
K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
K01799 nicE; maleate isomerase [EC:5.2.1.1]
K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
K00241 sdhC; succinate dehydrogenase cytochrome b subunit
K00242 sdhD; succinate dehydrogenase membrane anchor subunit
K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
K25996 frdC; succinate dehydrogenase subunit C
K25996 frdC; succinate dehydrogenase subunit C
K26318 fccA; fumarate reductase (cytochrome) [EC:1.3.2.4]
K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]





     00660 C5-Branched dibasic acid metabolism [PATH:swd00660]





     00562 Inositol phosphate metabolism [PATH:swd00562]





 







   09102 Energy metabolism





 







   09103 Lipid metabolism





 







   09104 Nucleotide metabolism





 







   09105 Amino acid metabolism





 







   09106 Metabolism of other amino acids





 







   09107 Glycan biosynthesis and metabolism





 







   09108 Metabolism of cofactors and vitamins





 







   09109 Metabolism of terpenoids and polyketides





 







   09110 Biosynthesis of other secondary metabolites





 







   09111 Xenobiotics biodegradation and metabolism





     00362 Benzoate degradation [PATH:swd00362]





       Swoo_3027 acetyl-CoA C-acyltransferase FadI
       Swoo_0020 acetyl-CoA C-acyltransferase FadA
       Swoo_0222 beta-ketoadipyl CoA thiolase
       Swoo_1392 4-oxalocrotonate decarboxylase
       Swoo_1390 4-hydroxy-2-oxovalerate aldolase
       Swoo_1391 acetaldehyde dehydrogenase (acetylating)
       Swoo_1410 2-hydroxymuconic semialdehyde dehydrogenase
       Swoo_1406 4-oxalocrotonate decarboxylase
       Swoo_4049 Carboxymuconolactone decarboxylase
       Swoo_3026 fatty acid oxidation complex, alpha subunit FadJ
       Swoo_0021 fatty oxidation complex, alpha subunit FadB
       Swoo_0214 3-hydroxyacyl-CoA dehydrogenase NAD-binding
       Swoo_1741 sodium ion-translocating decarboxylase, beta subunit
       Swoo_3335 sodium ion-translocating decarboxylase, beta subunit
       Swoo_1033 acyl-CoA dehydrogenase domain protein
       Swoo_3202 acetyl-CoA acetyltransferase



K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174]
K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132]
K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43]
K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87]
K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77]
K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]





     00627 Aminobenzoate degradation [PATH:swd00627]





     00364 Fluorobenzoate degradation [PATH:swd00364]





     00625 Chloroalkane and chloroalkene degradation [PATH:swd00625]





     00361 Chlorocyclohexane and chlorobenzene degradation [PATH:swd00361]





     00623 Toluene degradation [PATH:swd00623]





     00622 Xylene degradation [PATH:swd00622]





       Swoo_1410 2-hydroxymuconic semialdehyde dehydrogenase
       Swoo_1406 4-oxalocrotonate decarboxylase
       Swoo_1392 4-oxalocrotonate decarboxylase
       Swoo_1390 4-hydroxy-2-oxovalerate aldolase
       Swoo_1391 acetaldehyde dehydrogenase (acetylating)



K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77]
K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132]
K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43]
K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87]





     00633 Nitrotoluene degradation [PATH:swd00633]





     00642 Ethylbenzene degradation





     00643 Styrene degradation [PATH:swd00643]





     00791 Atrazine degradation





     00930 Caprolactam degradation [PATH:swd00930]





     00363 Bisphenol degradation





     00621 Dioxin degradation [PATH:swd00621]





       Swoo_1406 4-oxalocrotonate decarboxylase
       Swoo_1392 4-oxalocrotonate decarboxylase
       Swoo_1390 4-hydroxy-2-oxovalerate aldolase
       Swoo_1391 acetaldehyde dehydrogenase (acetylating)



K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77]
K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132]
K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43]
K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87]





     00626 Naphthalene degradation [PATH:swd00626]





     00624 Polycyclic aromatic hydrocarbon degradation





     00365 Furfural degradation





     00984 Steroid degradation





     00980 Metabolism of xenobiotics by cytochrome P450





     00982 Drug metabolism - cytochrome P450





     00983 Drug metabolism - other enzymes





 







   09112 Not included in regular maps





 







 09120 Genetic Information Processing





 







 09130 Environmental Information Processing





 







 09140 Cellular Processes





 







 09150 Organismal Systems





 







 09160 Human Diseases





 







 09180 Brite Hierarchies





 







 09190 Not Included in Pathway or Brite













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Last updated: April 23, 2024