KEGG Orthology (KO) - Shewanella piezotolerans

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     KO
 Metabolism
 
   Overview
 
   Carbohydrate metabolism
 
   Energy metabolism
 
   Lipid metabolism
 
   Nucleotide metabolism
 
   Amino acid metabolism
 
   Metabolism of other amino acids
 
   Glycan biosynthesis and metabolism
 
   Metabolism of cofactors and vitamins
     00730 Thiamine metabolism [PATH:swp00730]
     00740 Riboflavin metabolism [PATH:swp00740]
     00750 Vitamin B6 metabolism [PATH:swp00750]
     00760 Nicotinate and nicotinamide metabolism [PATH:swp00760]
     00770 Pantothenate and CoA biosynthesis [PATH:swp00770]
     00780 Biotin metabolism [PATH:swp00780]
     00785 Lipoic acid metabolism [PATH:swp00785]
     00790 Folate biosynthesis [PATH:swp00790]
       swp_0145 GTP cyclohydrolase I 
       swp_2198 GTP cyclohydrolase I 
       swp_1292 Alkaline phosphatase 
       swp_3844 Alkaline phosphatase
       swp_1294 Alkaline phosphatase
       swp_4477 Cold-active alkaline phosphatase 
       swp_0867 Twin-arginine translocation pathway signal
       swp_1118 Dihydroneopterin aldolase family:Dihydroneopterin aldolase 
       swp_4389 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 
       swp_1119 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
       swp_1212 Dihydropteroate synthase 
       swp_4092 Dihydrofolate reductase 
       swp_0144 Oxidoreductase
       swp_3115 Folylpolyglutamate synthetase 
       swp_2376 Radical activating enzyme
       swp_2375 ExsB
       swp_3543 GTP cyclohydrolase I
       swp_4984 Radical SAM:Molybdenum cofactor synthesis C
       swp_5009 Radical SAM:Molybdenum cofactor synthesis C
       swp_5007 Molybdopterin cofactor biosynthesis protein MoaC
       swp_5005 Molybdenum cofactor biosynthesis protein E
       swp_5006 Molybdenum cofactor biosynthesis protein D
       swp_0798 Glutamine amidotransferase of anthranilate synthase 
       swp_2634 Para-aminobenzoate synthase
       swp_2835 4-amino-4-deoxychorismate lyase 
K01495 GCH1; GTP cyclohydrolase I [EC:3.5.4.16]
K01495 GCH1; GTP cyclohydrolase I [EC:3.5.4.16]
K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
K01633 folB; dihydroneopterin aldolase [EC:4.1.2.25]
K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
K00287 folA; dihydrofolate reductase [EC:1.5.1.3]
K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.- 1.5.1.3]
K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
K03639 MOCS1; cyclic pyranopterin phosphate synthase [EC:4.1.99.18]
K03639 MOCS1; cyclic pyranopterin phosphate synthase [EC:4.1.99.18]
K03637 moaC; cyclic pyranopterin phosphate synthase [EC:4.1.99.18]
K03635 MOCS2; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
K03636 moaD; molybdopterin synthase sulfur carrier subunit
K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
     00670 One carbon pool by folate [PATH:swp00670]
     00830 Retinol metabolism
     00860 Porphyrin and chlorophyll metabolism [PATH:swp00860]
     00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:swp00130]
 
   Metabolism of terpenoids and polyketides
 
   Biosynthesis of other secondary metabolites
 
   Xenobiotics biodegradation and metabolism
     00362 Benzoate degradation [PATH:swp00362]
     00627 Aminobenzoate degradation [PATH:swp00627]
       swp_1753 Acylphosphatase
       swp_1292 Alkaline phosphatase 
       swp_3844 Alkaline phosphatase
       swp_1294 Alkaline phosphatase
       swp_4477 Cold-active alkaline phosphatase 
       swp_0867 Twin-arginine translocation pathway signal
K01512 acyP; acylphosphatase [EC:3.6.1.7]
K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
     00364 Fluorobenzoate degradation [PATH:swp00364]
     00625 Chloroalkane and chloroalkene degradation [PATH:swp00625]
     00361 Chlorocyclohexane and chlorobenzene degradation [PATH:swp00361]
     00623 Toluene degradation [PATH:swp00623]
     00622 Xylene degradation
     00633 Nitrotoluene degradation [PATH:swp00633]
     00642 Ethylbenzene degradation
     00643 Styrene degradation [PATH:swp00643]
     00791 Atrazine degradation
     00930 Caprolactam degradation [PATH:swp00930]
     00351 1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation
     00363 Bisphenol degradation
     00621 Dioxin degradation
     00626 Naphthalene degradation [PATH:swp00626]
     00624 Polycyclic aromatic hydrocarbon degradation
     00365 Furfural degradation
     00984 Steroid degradation
     00980 Metabolism of xenobiotics by cytochrome P450
     00982 Drug metabolism - cytochrome P450
     00983 Drug metabolism - other enzymes
 
   Enzyme families
 
 Genetic Information Processing
 
 Environmental Information Processing
 
   Membrane transport
 
   Signal transduction
     02020 Two-component system [PATH:swp02020]
       swp_1265 Phosphate regulon sensor protein PhoR
       swp_1264 Response regulator receiver:Transcriptional regulatory protein
       swp_1292 Alkaline phosphatase 
       swp_3844 Alkaline phosphatase
       swp_1294 Alkaline phosphatase
       swp_4477 Cold-active alkaline phosphatase 
       swp_0867 Twin-arginine translocation pathway signal
       swp_1267 Phosphate-binding protein
       swp_5140 Phosphate ABC transporter
       swp_2248 ATP-binding region
       swp_3573 ATP-binding region
       swp_2249 Response regulator receiver:Transcriptional regulatory protein
       swp_3572 DNA-binding response regulator
       swp_4864 ATP-binding region
       swp_4862 Response regulator receiver:Transcriptional regulatory protein
       swp_0242 ATP-binding region
       swp_0243 Response regulator receiver:Transcriptional regulatory protein
       swp_4811 Secretion protein HlyD
       swp_4812 Heavy metal efflux pump CzcA
       swp_1510 Flagellin
       swp_5118 Flagellin
       swp_1538 Sigma-70 region 3:Sigma-70 region 2:Sigma-70 region 4
       swp_5124 Sigma-70 region 3:Sigma-70 region 2:Sigma-70 region 4
       swp_3616 MotA/TolQ/ExbB proton channel
       swp_5125 MotA/TolQ/ExbB proton channel
       swp_1072 Response regulator receiver:ATP-binding region
       swp_1068 Response regulator receiver:Transcriptional regulatory protein
       swp_3990 NapC/NirT cytochrome c
       swp_3991 Twin-arginine translocation pathway signal 
       swp_3992 Cytoplasmic chaperone TorD
       swp_4347 Aerobic respiration control protein ArcA
       swp_4835 Cytochrome oxidase assembly
       swp_0015 Chromosomal replication initiator protein DnaA
       swp_4402 Anaerobic c4-dicarboxylate membrane transporter
       swp_3875 Malate dehydrogenase (oxaloacetate decarboxylating) (NADP+) 
       swp_0106 ABC transporter
       swp_0105 Transport protein
       swp_3960 ATP-binding region
       swp_3961 Regulatory protein
       swp_0430 Fumarate reductase flavoprotein subunit 
       swp_4352 Flavocytochrome c precursor 
       swp_0431 Succinate dehydrogenase/fumarate reductase iron-sulfur protein 
       swp_0428 Fumarate reductase cytochrome B subunit 
       swp_0429 Fumarate reductase respiratory complex
       swp_3476 Lipoprotein
       swp_1351 Response regulator receiver:ATP-binding region
       swp_2799 Regulatory protein
       swp_2798 Regulatory protein
       swp_1368 Carbon storage regulator
       swp_2482 Beta-lactamase
       swp_0311 Sensor histidine kinase
       swp_0310 Regulatory protein
       swp_3525 Protein-P-II uridylyltransferase 
       swp_0977 Protein-P-II uridylyltransferase
       swp_3715 Nitrogen regulatory protein P-II
       swp_0250 ATP-binding region
       swp_0249 Helix-turn-helix
       swp_0424 Glutamine synthetase 
       swp_0268 Glutamine synthetase 
       swp_4159 Glutamate--ammonia ligase 
       swp_3387 Thiolase 
       swp_0677 RNA polymerase sigma-54 factor
       swp_4760 Tfp pilus assembly protein
       swp_2641 Cytochrome B561
       swp_1497 Protein-glutamate O-methyltransferase 
       swp_4090 Histidine kinase
       swp_3016 Histidine kinase
       swp_3912 Methyl-accepting chemotaxis protein
       swp_5011 Histidine kinase
       swp_1480 Histidine kinase
       swp_2692 Histidine kinase
       swp_0808 Methyl-accepting chemotaxis protein
       swp_1896 Histidine kinase
       swp_1257 Methyl-accepting chemotaxis protein
       swp_0230 IMP dehydrogenase/GMP reductase:Histidine kinase
       swp_2137 Methyl-accepting chemotaxis protein
       swp_3706 Histidine kinase
       swp_3858 Methyl-accepting chemotaxis protein
       swp_2932 Methyl-accepting chemotaxis protein
       swp_1545 CheW-like protein
       swp_1548 CheW-like protein
       swp_1541 CheW-like protein:ATP-binding region
       swp_0536 Response regulator receiver
       swp_1539 Response regulator receiver 
       swp_1542 Protein-glutamate methylesterase 
       swp_1668 Chemotaxis protein CheV
       swp_1496 Response regulator receiver:CheW-like protein
       swp_2855 Chemotaxis protein CheV
       swp_1237 ATP-binding region
       swp_1236 Regulatory protein
       swp_1516 Flagellar regulatory protein A
       swp_1517 ATP-binding region
       swp_1518 Helix-turn-helix
       swp_0755 Cyclic nucleotide-binding:Bacterial regulatory protein
       swp_4595 ATP-binding region
       swp_4594 Helix-turn-helix
       swp_0793 Ubiquinol-cytochrome c reductase
       swp_0794 Cytochrome b/b6
       swp_0795 Ubiquinol-cytochrome c reductase
       swp_2572 Cytochrome c oxidase cbb3-type
       swp_2573 Cytochrome c oxidase
       swp_2574 Cbb3-type cytochrome oxidase component
       swp_2575 Cytochrome c oxidase cbb3-type
       swp_1469 Cytochrome bd ubiquinol oxidase
       swp_1470 Cytochrome d ubiquinol oxidase
       swp_0763 Type I secretion outer membrane protein
K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
K02040 pstS; phosphate transport system substrate-binding protein
K02040 pstS; phosphate transport system substrate-binding protein
K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
K07660 phoP; two-component system, OmpR family, response regulator PhoP
K07660 phoP; two-component system, OmpR family, response regulator PhoP
K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
K07662 cpxR; two-component system, OmpR family, response regulator CpxR
K07798 cusB; membrane fusion protein, Cu(I)/Ag(I) efflux system
K07787 cusA; Cu(I)/Ag(I) efflux system membrane protein CusA/SilA
K02406 fliC; flagellin
K02406 fliC; flagellin
K02405 fliA; RNA polymerase sigma factor for flagellar operon FliA
K02405 fliA; RNA polymerase sigma factor for flagellar operon FliA
K02556 motA; chemotaxis protein MotA
K02556 motA; chemotaxis protein MotA
K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3]
K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR
K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
K03533 torD; TorA specific chaperone
K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
K02259 COX15; cytochrome c oxidase assembly protein subunit 15
K02313 dnaA; chromosomal replication initiator protein
K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
K09697 natA; sodium transport system ATP-binding protein
K09696 natB; sodium transport system permease protein
K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
K00244 frdA; fumarate reductase flavoprotein subunit [EC:1.3.5.4]
K00244 frdA; fumarate reductase flavoprotein subunit [EC:1.3.5.4]
K00245 frdB; fumarate reductase iron-sulfur subunit [EC:1.3.5.4]
K00246 frdC; fumarate reductase subunit C
K00246 frdC; fumarate reductase subunit C
K06080 rcsF; RcsF protein
K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
K03563 csrA; carbon storage regulator
K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
K07693 desR; two-component system, NarL family, response regulator DesR
K00990 glnD
K00990 glnD
K04751 glnB; nitrogen regulatory protein P-II 1
K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
K01915 glnA; glutamine synthetase [EC:6.3.1.2]
K01915 glnA; glutamine synthetase [EC:6.3.1.2]
K01915 glnA; glutamine synthetase [EC:6.3.1.2]
K00626 E2.3.1.9; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
K03092 SIG54; RNA polymerase sigma-54 factor
K02650 pilA; type IV pilus assembly protein PilA
K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit
K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
K03406 mcp; methyl-accepting chemotaxis protein
K03406 mcp; methyl-accepting chemotaxis protein
K03406 mcp; methyl-accepting chemotaxis protein
K03406 mcp; methyl-accepting chemotaxis protein
K03406 mcp; methyl-accepting chemotaxis protein
K03406 mcp; methyl-accepting chemotaxis protein
K03406 mcp; methyl-accepting chemotaxis protein
K03406 mcp; methyl-accepting chemotaxis protein
K03406 mcp; methyl-accepting chemotaxis protein
K03406 mcp; methyl-accepting chemotaxis protein
K03406 mcp; methyl-accepting chemotaxis protein
K03406 mcp; methyl-accepting chemotaxis protein
K03406 mcp; methyl-accepting chemotaxis protein
K03406 mcp; methyl-accepting chemotaxis protein
K03408 cheW; purine-binding chemotaxis protein CheW
K03408 cheW; purine-binding chemotaxis protein CheW
K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
K03413 cheY; two-component system, chemotaxis family, response regulator CheY
K03413 cheY; two-component system, chemotaxis family, response regulator CheY
K03412 cheB; two-component system, chemotaxis family, response regulator CheB [EC:3.1.1.61]
K03415 cheV; two-component system, chemotaxis family, response regulator CheV
K03415 cheV; two-component system, chemotaxis family, response regulator CheV
K03415 cheV; two-component system, chemotaxis family, response regulator CheV
K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
K13041 ttrR; two-component system, LuxR family, response regulator TtrR
K10941 flrA; sigma-54 specific transcriptional regulator, flagellar regulatory protein A
K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
K10943 flrC; two-component system, response regulator FlrC
K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
K15012 regA; two-component system, response regulator RegA
K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:1.10.2.2]
K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1]
K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
K00425 cydA; cytochrome d ubiquinol oxidase subunit I [EC:1.10.3.-]
K00426 cydB; cytochrome d ubiquinol oxidase subunit II [EC:1.10.3.-]
K12340 tolC; outer membrane protein
     02022 Two-component system [BR:swp02022]
     04014 Ras signaling pathway
     04015 Rap1 signaling pathway
     04010 MAPK signaling pathway
     04013 MAPK signaling pathway - fly
     04011 MAPK signaling pathway - yeast
     04012 ErbB signaling pathway
     04310 Wnt signaling pathway
     04330 Notch signaling pathway
     04340 Hedgehog signaling pathway
     04350 TGF-beta signaling pathway
     04390 Hippo signaling pathway
     04391 Hippo signaling pathway -fly
     04370 VEGF signaling pathway
     04630 Jak-STAT signaling pathway
     04064 NF-kappa B signaling pathway
     04668 TNF signaling pathway
     04066 HIF-1 signaling pathway
     04068 FoxO signaling pathway
     04020 Calcium signaling pathway
     04070 Phosphatidylinositol signaling system
     04072 Phospholipase D signaling pathway
     04071 Sphingolipid signaling pathway
     04024 cAMP signaling pathway
     04022 cGMP - PKG signaling pathway
     04151 PI3K-Akt signaling pathway
     04152 AMPK signaling pathway
     04150 mTOR signaling pathway
     04075 Plant hormone signal transduction
 
   Signaling molecules and interaction
 
 Cellular Processes
 
 Organismal Systems
 
 Human Diseases

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Last updated: February 10, 2016