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KO |
09100 Metabolism
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09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:synp03030]
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03410 Base excision repair [PATH:synp03410]
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03420 Nucleotide excision repair [PATH:synp03420]
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03430 Mismatch repair [PATH:synp03430]
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03440 Homologous recombination [PATH:synp03440]
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Syn7502_02524 single-stranded-DNA-specific exonuclease RecJ
Syn7502_01098 single-stranded-DNA-specific exonuclease RecJ
Syn7502_03541 single stranded DNA-binding protein
Syn7502_02760 DNA replication and repair protein RecF
Syn7502_02371 DNA replication and repair protein RecO
Syn7502_03424 DNA replication and repair protein RecR
Syn7502_00558 protein RecA
Syn7502_01338 Holliday junction DNA helicase subunit RuvA
Syn7502_01254 Holliday junction DNA helicase subunit RuvB
Syn7502_03551 holliday junction resolvasome, endonuclease subunit
Syn7502_00503 ATP-dependent DNA helicase RecG
Syn7502_03594 ATP-dependent exoDNAse (exonuclease V), alpha subunit/helicase superfamily I member
Syn7502_00018 DNA polymerase III, alpha subunit
Syn7502_01709 DNA-directed DNA polymerase III PolC
Syn7502_01091 DNA polymerase III, beta subunit
Syn7502_03377 DNA polymerase III, subunit gamma/tau
Syn7502_02482 DNA polymerase III, delta subunit
Syn7502_02621 hypothetical protein
Syn7502_03412 replication restart DNA helicase PriA
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:synp03000]
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03021 Transcription machinery [BR:synp03021]
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03019 Messenger RNA biogenesis [BR:synp03019]
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03041 Spliceosome [BR:synp03041]
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03011 Ribosome [BR:synp03011]
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03009 Ribosome biogenesis [BR:synp03009]
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03016 Transfer RNA biogenesis [BR:synp03016]
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03012 Translation factors [BR:synp03012]
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03110 Chaperones and folding catalysts [BR:synp03110]
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04131 Membrane trafficking [BR:synp04131]
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04121 Ubiquitin system [BR:synp04121]
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03051 Proteasome [BR:synp03051]
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03032 DNA replication proteins [BR:synp03032]
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03036 Chromosome and associated proteins [BR:synp03036]
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03400 DNA repair and recombination proteins [BR:synp03400]
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Syn7502_00730 deoxyribodipyrimidine photolyase
Syn7502_02422 DNA-3-methyladenine glycosylase
Syn7502_01031 endonuclease III
Syn7502_02299 ADP-ribose pyrophosphatase
Syn7502_00740 mutator mutT protein
Syn7502_01987 deoxyribodipyrimidine photolyase-related protein
Syn7502_02713 uracil-DNA glycosylase, family 4
Syn7502_00072 formamidopyrimidine-DNA glycosylase Fpg
Syn7502_00044 exodeoxyribonuclease III
Syn7502_02524 single-stranded-DNA-specific exonuclease RecJ
Syn7502_01098 single-stranded-DNA-specific exonuclease RecJ
Syn7502_00495 DNA ligase, NAD-dependent
Syn7502_00270 excinuclease ABC, A subunit
Syn7502_03350 Excinuclease ABC subunit B
Syn7502_01252 Excinuclease ABC subunit C
Syn7502_03517 DNA/RNA helicase, superfamily I
Syn7502_03501 ATP-dependent DNA helicase PcrA
Syn7502_02609 DNA-directed RNA polymerase, beta subunit
Syn7502_02607 DNA-directed RNA polymerase, beta'''' subunit
Syn7502_02608 DNA-directed RNA polymerase, gamma subunit
Syn7502_01812 DNA-directed RNA polymerase, alpha subunit
Syn7502_00411 DNA-directed RNA polymerase, subunit K/omega
Syn7502_00978 transcription-repair coupling factor Mfd
Syn7502_00859 DNA mismatch repair protein MutS
Syn7502_00185 MutS2 family protein
Syn7502_00398 DNA mismatch repair protein MutL
Syn7502_02834 Exodeoxyribonuclease VII large subunit
Syn7502_02835 exonuclease VII small subunit
Syn7502_03609 exonuclease VII small subunit
Syn7502_00018 DNA polymerase III, alpha subunit
Syn7502_01709 DNA-directed DNA polymerase III PolC
Syn7502_01091 DNA polymerase III, beta subunit
Syn7502_02482 DNA polymerase III, delta subunit
Syn7502_02621 hypothetical protein
Syn7502_03377 DNA polymerase III, subunit gamma/tau
Syn7502_03541 single stranded DNA-binding protein
Syn7502_02118 site-specific DNA methylase
Syn7502_03559 DNA adenine methylase Dam
Syn7502_03594 ATP-dependent exoDNAse (exonuclease V), alpha subunit/helicase superfamily I member
Syn7502_00558 protein RecA
Syn7502_01338 Holliday junction DNA helicase subunit RuvA
Syn7502_01254 Holliday junction DNA helicase subunit RuvB
Syn7502_03551 holliday junction resolvasome, endonuclease subunit
Syn7502_03412 replication restart DNA helicase PriA
Syn7502_01644 ATPase involved in DNA repair
Syn7502_03389 ATPase involved in DNA repair
Syn7502_02495 Exodeoxyribonuclease I subunit D
Syn7502_00893 DNA repair exonuclease
Syn7502_01114 DNA repair protein RadA
Syn7502_02760 DNA replication and repair protein RecF
Syn7502_00503 ATP-dependent DNA helicase RecG
Syn7502_02371 DNA replication and repair protein RecO
Syn7502_03424 DNA replication and repair protein RecR
Syn7502_02600 DNA repair protein RecN
Syn7502_02839 CRISPR-associated endonuclease Cas1
Syn7502_00826 DNA gyrase, A subunit
Syn7502_01223 type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit
Syn7502_02123 DNA gyrase, B subunit
Syn7502_00129 DNA topoisomerase I, bacterial
Syn7502_00353 bacterial nucleoid DNA-binding protein
Syn7502_01688 bacterial nucleoid DNA-binding protein
Syn7502_02804 ATP-dependent DNA helicase, RecQ family
Syn7502_03231 SOS response transcriptional repressor, RecA-mediated autopeptidase
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K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K15342 cas1; CRISP-associated protein Cas1
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03530 hupB; DNA-binding protein HU-beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03503 umuD; DNA polymerase V [EC:3.4.21.-]
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03029 Mitochondrial biogenesis [BR:synp03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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