KEGG Orthology (KO) - Synechococcus sp. PCC 7502

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     KO
 09100 Metabolism
 
 09120 Genetic Information Processing
 
   09121 Transcription
 
   09122 Translation
 
   09123 Folding, sorting and degradation
 
   09124 Replication and repair
     03030 DNA replication [PATH:synp03030]
     03410 Base excision repair [PATH:synp03410]
     03420 Nucleotide excision repair [PATH:synp03420]
     03430 Mismatch repair [PATH:synp03430]
     03440 Homologous recombination [PATH:synp03440]
       Syn7502_02524 single-stranded-DNA-specific exonuclease RecJ
       Syn7502_01098 single-stranded-DNA-specific exonuclease RecJ
       Syn7502_03541 single stranded DNA-binding protein
       Syn7502_02760 DNA replication and repair protein RecF
       Syn7502_02371 DNA replication and repair protein RecO
       Syn7502_03424 DNA replication and repair protein RecR
       Syn7502_00558 protein RecA
       Syn7502_01338 Holliday junction DNA helicase subunit RuvA
       Syn7502_01254 Holliday junction DNA helicase subunit RuvB
       Syn7502_03551 holliday junction resolvasome, endonuclease subunit
       Syn7502_00503 ATP-dependent DNA helicase RecG
       Syn7502_03594 ATP-dependent exoDNAse (exonuclease V), alpha subunit/helicase superfamily I member
       Syn7502_00018 DNA polymerase III, alpha subunit
       Syn7502_01709 DNA-directed DNA polymerase III PolC
       Syn7502_01091 DNA polymerase III, beta subunit
       Syn7502_03377 DNA polymerase III, subunit gamma/tau
       Syn7502_02482 DNA polymerase III, delta subunit
       Syn7502_02621 hypothetical protein
       Syn7502_03412 replication restart DNA helicase PriA
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
     03450 Non-homologous end-joining
     03460 Fanconi anemia pathway
 
   09126 Chromosome
 
   09125 Information processing in viruses
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:synp03000]
     03021 Transcription machinery [BR:synp03021]
     03019 Messenger RNA biogenesis [BR:synp03019]
     03041 Spliceosome [BR:synp03041]
     03011 Ribosome [BR:synp03011]
     03009 Ribosome biogenesis [BR:synp03009]
     03016 Transfer RNA biogenesis [BR:synp03016]
     03012 Translation factors [BR:synp03012]
     03110 Chaperones and folding catalysts [BR:synp03110]
     04131 Membrane trafficking [BR:synp04131]
     04121 Ubiquitin system [BR:synp04121]
     03051 Proteasome [BR:synp03051]
     03032 DNA replication proteins [BR:synp03032]
     03036 Chromosome and associated proteins [BR:synp03036]
     03400 DNA repair and recombination proteins [BR:synp03400]
       Syn7502_00730 deoxyribodipyrimidine photolyase
       Syn7502_02422 DNA-3-methyladenine glycosylase
       Syn7502_01031 endonuclease III
       Syn7502_02299 ADP-ribose pyrophosphatase
       Syn7502_00740 mutator mutT protein
       Syn7502_01987 deoxyribodipyrimidine photolyase-related protein
       Syn7502_02713 uracil-DNA glycosylase, family 4
       Syn7502_00072 formamidopyrimidine-DNA glycosylase Fpg
       Syn7502_00044 exodeoxyribonuclease III
       Syn7502_02524 single-stranded-DNA-specific exonuclease RecJ
       Syn7502_01098 single-stranded-DNA-specific exonuclease RecJ
       Syn7502_00495 DNA ligase, NAD-dependent
       Syn7502_00270 excinuclease ABC, A subunit
       Syn7502_03350 Excinuclease ABC subunit B
       Syn7502_01252 Excinuclease ABC subunit C
       Syn7502_03517 DNA/RNA helicase, superfamily I
       Syn7502_03501 ATP-dependent DNA helicase PcrA
       Syn7502_02609 DNA-directed RNA polymerase, beta subunit
       Syn7502_02607 DNA-directed RNA polymerase, beta'''' subunit
       Syn7502_02608 DNA-directed RNA polymerase, gamma subunit
       Syn7502_01812 DNA-directed RNA polymerase, alpha subunit
       Syn7502_00411 DNA-directed RNA polymerase, subunit K/omega
       Syn7502_00978 transcription-repair coupling factor Mfd
       Syn7502_00859 DNA mismatch repair protein MutS
       Syn7502_00185 MutS2 family protein
       Syn7502_00398 DNA mismatch repair protein MutL
       Syn7502_02834 Exodeoxyribonuclease VII large subunit
       Syn7502_02835 exonuclease VII small subunit
       Syn7502_03609 exonuclease VII small subunit
       Syn7502_00018 DNA polymerase III, alpha subunit
       Syn7502_01709 DNA-directed DNA polymerase III PolC
       Syn7502_01091 DNA polymerase III, beta subunit
       Syn7502_02482 DNA polymerase III, delta subunit
       Syn7502_02621 hypothetical protein
       Syn7502_03377 DNA polymerase III, subunit gamma/tau
       Syn7502_03541 single stranded DNA-binding protein
       Syn7502_02118 site-specific DNA methylase
       Syn7502_03559 DNA adenine methylase Dam
       Syn7502_03594 ATP-dependent exoDNAse (exonuclease V), alpha subunit/helicase superfamily I member
       Syn7502_00558 protein RecA
       Syn7502_01338 Holliday junction DNA helicase subunit RuvA
       Syn7502_01254 Holliday junction DNA helicase subunit RuvB
       Syn7502_03551 holliday junction resolvasome, endonuclease subunit
       Syn7502_03412 replication restart DNA helicase PriA
       Syn7502_01644 ATPase involved in DNA repair
       Syn7502_03389 ATPase involved in DNA repair
       Syn7502_02495 Exodeoxyribonuclease I subunit D
       Syn7502_00893 DNA repair exonuclease
       Syn7502_01114 DNA repair protein RadA
       Syn7502_02760 DNA replication and repair protein RecF
       Syn7502_00503 ATP-dependent DNA helicase RecG
       Syn7502_02371 DNA replication and repair protein RecO
       Syn7502_03424 DNA replication and repair protein RecR
       Syn7502_02600 DNA repair protein RecN
       Syn7502_02839 CRISPR-associated endonuclease Cas1
       Syn7502_00826 DNA gyrase, A subunit
       Syn7502_01223 type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit
       Syn7502_02123 DNA gyrase, B subunit
       Syn7502_00129 DNA topoisomerase I, bacterial
       Syn7502_00353 bacterial nucleoid DNA-binding protein
       Syn7502_01688 bacterial nucleoid DNA-binding protein
       Syn7502_02804 ATP-dependent DNA helicase, RecQ family
       Syn7502_03231 SOS response transcriptional repressor, RecA-mediated autopeptidase
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K15342 cas1; CRISP-associated protein Cas1
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03530 hupB; DNA-binding protein HU-beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03503 umuD; DNA polymerase V [EC:3.4.21.-]
     03029 Mitochondrial biogenesis [BR:synp03029]
 
   09183 Protein families: signaling and cellular processes
 
   09185 Viral protein families
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: April 23, 2024