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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:tea03030]
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 KUI_0316 dnaQ; DNA polymerase III, epsilon subunit
KUI_0317 DNA polymerase III, epsilon subunit
KUI_0729 dnaE2; DNA polymerase III, alpha subunit
KUI_0821 holB; DNA polymerase III, delta' subunit
KUI_0584 holA; putative DNA polymerase III, delta subunit
KUI_0510 holC; DNA polymerase III chi subunit
KUI_0002 DNA polymerase III beta subunit
KUI_1072 dnaB; replicative DNA helicase
KUI_0911 dnaG; DNA primase
KUI_1490 ssb7; single-stranded DNA-binding protein
KUI_1491 ssb2; single-stranded DNA-binding protein
KUI_1372 rnhA; ribonuclease H
KUI_0808 rnhB; ribonuclease HII
KUI_1089 polA; DNA polymerase I
KUI_0472 ligA; DNA ligase
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K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
K02316 dnaG; DNA primase [EC:2.7.7.101]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
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03410 Base excision repair [PATH:tea03410]
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03420 Nucleotide excision repair [PATH:tea03420]
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03430 Mismatch repair [PATH:tea03430]
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KUI_0589 mutS; DNA mismatch repair protein MutS
KUI_1253 mutL; DNA mismatch repair protein
KUI_1045 uvrD; DNA helicase II
KUI_0011 putative helicase
KUI_0768 exodeoxyribonuclease VII complex
KUI_1080 xseB; exodeoxyribonuclease 7 small subunit
KUI_0648 recJ; single-stranded-DNA-specific exonuclease
KUI_1490 ssb7; single-stranded DNA-binding protein
KUI_1491 ssb2; single-stranded DNA-binding protein
KUI_0729 dnaE2; DNA polymerase III, alpha subunit
KUI_0002 DNA polymerase III beta subunit
KUI_0584 holA; putative DNA polymerase III, delta subunit
KUI_0821 holB; DNA polymerase III, delta' subunit
KUI_0316 dnaQ; DNA polymerase III, epsilon subunit
KUI_0317 DNA polymerase III, epsilon subunit
KUI_0510 holC; DNA polymerase III chi subunit
KUI_0472 ligA; DNA ligase
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K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
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03440 Homologous recombination [PATH:tea03440]
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KUI_0648 recJ; single-stranded-DNA-specific exonuclease
KUI_1490 ssb7; single-stranded DNA-binding protein
KUI_1491 ssb2; single-stranded DNA-binding protein
KUI_0508 recO; DNA repair protein
KUI_1237 recR; recombination protein RecR
KUI_0853 recA; RecA protein (recombinase A)
KUI_1089 polA; DNA polymerase I
KUI_1276 ruvA; Holliday junction ATP-dependent DNA helicase RuvA
KUI_1279 ruvB; Holliday junction ATP-dependent DNA helicase RuvB
KUI_1275 ruvC; crossover junction endodeoxyribonuclease RuvC
KUI_1061 recG; ATP-dependent DNA helicase
KUI_0729 dnaE2; DNA polymerase III, alpha subunit
KUI_0002 DNA polymerase III beta subunit
KUI_0584 holA; putative DNA polymerase III, delta subunit
KUI_0821 holB; DNA polymerase III, delta' subunit
KUI_0316 dnaQ; DNA polymerase III, epsilon subunit
KUI_0317 DNA polymerase III, epsilon subunit
KUI_0510 holC; DNA polymerase III chi subunit
KUI_0219 Primosomal protein
KUI_1075 priB; putative primosomal replication protein
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:tea03000]
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03021 Transcription machinery [BR:tea03021]
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03019 Messenger RNA biogenesis [BR:tea03019]
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03041 Spliceosome
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03011 Ribosome [BR:tea03011]
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03009 Ribosome biogenesis [BR:tea03009]
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03016 Transfer RNA biogenesis [BR:tea03016]
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03012 Translation factors [BR:tea03012]
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03110 Chaperones and folding catalysts [BR:tea03110]
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04131 Membrane trafficking [BR:tea04131]
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04121 Ubiquitin system
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03051 Proteasome
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03032 DNA replication proteins [BR:tea03032]
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KUI_1372 rnhA; ribonuclease H
KUI_0952 modification methylase HhaI
KUI_0954 cytosine-specific methyltransferase
KUI_0753 hupB; DNA-binding protein Hu-beta
KUI_0663 integration host factor subunit alpha
KUI_0563 ihfB; integration host factor subunit beta
KUI_0001 dnaA; chromosomal replication initiator protein DnaA
KUI_1072 dnaB; replicative DNA helicase
KUI_0911 dnaG; DNA primase
KUI_1490 ssb7; single-stranded DNA-binding protein
KUI_1491 ssb2; single-stranded DNA-binding protein
KUI_0729 dnaE2; DNA polymerase III, alpha subunit
KUI_0002 DNA polymerase III beta subunit
KUI_0510 holC; DNA polymerase III chi subunit
KUI_0584 holA; putative DNA polymerase III, delta subunit
KUI_0821 holB; DNA polymerase III, delta' subunit
KUI_0316 dnaQ; DNA polymerase III, epsilon subunit
KUI_0317 DNA polymerase III, epsilon subunit
KUI_0808 rnhB; ribonuclease HII
KUI_1089 polA; DNA polymerase I
KUI_0472 ligA; DNA ligase
KUI_1256 DnaA regulatory inactivator Hda
KUI_0557 gyrA; DNA gyrase subunit A
KUI_0003 gyrB; DNA gyrase subunit B
KUI_0626 parC; topoisomerase IV subunit A
KUI_0625 parE; topoisomerase IV subunit B
KUI_0014 topB; DNA topoisomerase
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K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
K03530 hupB; DNA-binding protein HU-beta
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K02313 dnaA; chromosomal replication initiator protein
K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
K02316 dnaG; DNA primase [EC:2.7.7.101]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K10763 hda; DnaA-homolog protein
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
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03036 Chromosome and associated proteins [BR:tea03036]
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03400 DNA repair and recombination proteins [BR:tea03400]
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KUI_0907 ung; uracil-DNA glycosylase
KUI_0482 putative endonuclease
KUI_0206 putative NUDIX hydrolase
KUI_1053 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase
KUI_0468 putative uracil-DNA glycosylase
KUI_1091 mutM; formamidopyrimidine-DNA glycosylase
KUI_1435 putative endonuclease
KUI_0845 xthA; exodeoxyribonuclease III
KUI_0648 recJ; single-stranded-DNA-specific exonuclease
KUI_0472 ligA; DNA ligase
KUI_1089 polA; DNA polymerase I
KUI_1331 uvrA; excinuclease ABC, A subunit
KUI_1493 uvrA; excinuclease ABC, A subunit
KUI_0856 uvrB; UvrABC system protein B
KUI_0890 uvrC; excinuclease ABC, subunit C
KUI_1045 uvrD; DNA helicase II
KUI_0011 putative helicase
KUI_1589 rpoB; DNA-directed RNA polymerase subunit beta
KUI_1588 rpoC; DNA-directed RNA polymerase subunit beta
KUI_1512 rpoA; DNA-directed RNA polymerase subunit alpha
KUI_0711 rpoZ; DNA-directed RNA polymerase subunit omega
KUI_0461 mfd; transcription-repair coupling factor
KUI_0589 mutS; DNA mismatch repair protein MutS
KUI_1253 mutL; DNA mismatch repair protein
KUI_0768 exodeoxyribonuclease VII complex
KUI_1080 xseB; exodeoxyribonuclease 7 small subunit
KUI_0729 dnaE2; DNA polymerase III, alpha subunit
KUI_0002 DNA polymerase III beta subunit
KUI_0510 holC; DNA polymerase III chi subunit
KUI_0584 holA; putative DNA polymerase III, delta subunit
KUI_0821 holB; DNA polymerase III, delta' subunit
KUI_0316 dnaQ; DNA polymerase III, epsilon subunit
KUI_0317 DNA polymerase III, epsilon subunit
KUI_1490 ssb7; single-stranded DNA-binding protein
KUI_1491 ssb2; single-stranded DNA-binding protein
KUI_0853 recA; RecA protein (recombinase A)
KUI_1276 ruvA; Holliday junction ATP-dependent DNA helicase RuvA
KUI_1279 ruvB; Holliday junction ATP-dependent DNA helicase RuvB
KUI_1275 ruvC; crossover junction endodeoxyribonuclease RuvC
KUI_0219 Primosomal protein
KUI_1075 priB; putative primosomal replication protein
KUI_0720 radA; DNA repair protein RadA
KUI_1061 recG; ATP-dependent DNA helicase
KUI_0508 recO; DNA repair protein
KUI_1237 recR; recombination protein RecR
KUI_1211 recN; ATPase involved in DNA repair
KUI_0854 rdgC; recombination associated protein
KUI_0225 CRISPR protein, Cas1
KUI_0535 hypothetical protein
KUI_0557 gyrA; DNA gyrase subunit A
KUI_0003 gyrB; DNA gyrase subunit B
KUI_0753 hupB; DNA-binding protein Hu-beta
KUI_1273 fis; putative transcriptional regulator, Fis family
KUI_0663 integration host factor subunit alpha
KUI_0563 ihfB; integration host factor subunit beta
KUI_1043 UmuC family protein
KUI_1044 putative component of DNA polymerase V
KUI_0858 lexA; LexA repressor
KUI_0852 recX; regulatory protein RecX
KUI_0669 helD; putative helicase IV
KUI_0882 nrdA; ribonucleoside-diphosphate reductase
KUI_0881 nrdB; ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like protein
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K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
K04485 radA; DNA repair protein RadA/Sms
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03554 rdgC; recombination associated protein RdgC
K15342 cas1; CRISP-associated protein Cas1
K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03530 hupB; DNA-binding protein HU-beta
K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K03502 umuC; DNA polymerase V
K03503 umuD; DNA polymerase V [EC:3.4.21.-]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03565 recX; regulatory protein
K03658 helD; DNA helicase IV [EC:5.6.2.4]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:tea03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Taylorella equigenitalis ATCC 35865