1. Oxidoreductases
2. Transferases
3. Hydrolases
3.1 Acting on ester bonds
3.2 Glycosylases
3.3 Acting on ether bonds
3.4 Acting on peptide bonds (peptidases)
3.4.11 Aminopeptidases
3.4.13 Dipeptidases
3.4.14 Dipeptidyl-peptidases and tripeptidyl-peptidases
3.4.15 Peptidyl-dipeptidases
3.4.16 Serine-type carboxypeptidases
3.4.17 Metallocarboxypeptidases
3.4.18 Cysteine-type carboxypeptidases
3.4.19 Omega peptidases
3.4.19.1 acylaminoacyl-peptidase
3.4.19.2 peptidyl-glycinamidase
3.4.19.3 pyroglutamyl-peptidase I
3.4.19.5 beta-aspartyl-peptidase
3.4.19.6 pyroglutamyl-peptidase II
3.4.19.7 N-formylmethionyl-peptidase
3.4.19.9 folate gamma-glutamyl hydrolase
3.4.19.11 gamma-D-glutamyl-meso-diaminopimelate peptidase
3.4.19.12 ubiquitinyl hydrolase 1
TTHERM_00823800 ubiquitin carboxyl-terminal hydrolase TTHERM_00245080 ubiquitin carboxyl-terminal hydrolase TTHERM_00535810 ubiquitin carboxyl-terminal hydrolase TTHERM_00492440 peptidase C65 otubain protein TTHERM_00077370 ubiquitin carboxyl-terminal hydrolase TTHERM_00338180 ubiquitin carboxyl-terminal hydrolase TTHERM_00408760 ubiquitin carboxyl-terminal hydrolase TTHERM_01108760 ubiquitin carboxy-terminal hydrolase TTHERM_00313670 ubiquitin carboxy-terminal hydrolase TTHERM_00324420 ubiquitin carboxy-terminal hydrolase TTHERM_00757780 ubiquitin carboxy-terminal hydrolase TTHERM_00445960 ubiquitin carboxy-terminal hydrolase TTHERM_00378550 ubiquitin carboxy-terminal hydrolase TTHERM_00590040 ubiquitin carboxy-terminal hydrolase TTHERM_00471920 ubiquitin carboxyl-terminal hydrolase TTHERM_00847000 ubiquitin carboxyl-terminal hydrolase TTHERM_00048860 ubiquitin carboxyl-terminal hydrolase TTHERM_00442520 ubiquitin carboxy-terminal hydrolase TTHERM_01261800 ubiquitin carboxy-terminal hydrolase TTHERM_00684530 ubiquitin carboxy-terminal hydrolase TTHERM_00825640 ubiquitin carboxy-terminal hydrolase TTHERM_00348750 ubiquitin carboxy-terminal hydrolase TTHERM_00842620 ubiquitin carboxy-terminal hydrolase TTHERM_001205389 ubiquitin carboxy-terminal hydrolase TTHERM_00193880 ubiquitin carboxy-terminal hydrolase TTHERM_00161340 ubiquitin carboxy-terminal hydrolase TTHERM_01094790 ubiquitin carboxy-terminal hydrolase TTHERM_00290870 ubiquitin carboxy-terminal hydrolase TTHERM_00499410 ubiquitin carboxy-terminal hydrolase TTHERM_00817280 OTU-like cysteine protease TTHERM_00419820 OTU-like cysteine protease TTHERM_00825070 josephin protein TTHERM_00058740 hypothetical protein TTHERM_00780610 hypothetical protein TTHERM_00449590 PPPDE peptidase domain protein, putative TTHERM_00049170 PPPDE peptidase domain protein, putative
K05609 UCHL3; ubiquitin carboxyl-terminal hydrolase L3 [EC:3.4.19.12] K05609 UCHL3; ubiquitin carboxyl-terminal hydrolase L3 [EC:3.4.19.12] K05610 UCHL5; ubiquitin carboxyl-terminal hydrolase L5 [EC:3.4.19.12] K09602 OTUB1; ubiquitin thioesterase protein OTUB1 [EC:3.4.19.12] K11835 USP4_11; ubiquitin carboxyl-terminal hydrolase 4/11 [EC:3.4.19.12] K11835 USP4_11; ubiquitin carboxyl-terminal hydrolase 4/11 [EC:3.4.19.12] K11836 USP5_13; ubiquitin carboxyl-terminal hydrolase 5/13 [EC:3.4.19.12] K11838 USP7; ubiquitin carboxyl-terminal hydrolase 7 [EC:3.4.19.12] K11838 USP7; ubiquitin carboxyl-terminal hydrolase 7 [EC:3.4.19.12] K11839 USP8; ubiquitin carboxyl-terminal hydrolase 8 [EC:3.4.19.12] K11839 USP8; ubiquitin carboxyl-terminal hydrolase 8 [EC:3.4.19.12] K11839 USP8; ubiquitin carboxyl-terminal hydrolase 8 [EC:3.4.19.12] K11840 USP9_24; ubiquitin carboxyl-terminal hydrolase 9/24 [EC:3.4.19.12] K11842 USP12_46; ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] K11843 USP14; ubiquitin carboxyl-terminal hydrolase 14 [EC:3.4.19.12] K11844 USP16_45; ubiquitin carboxyl-terminal hydrolase 16/45 [EC:3.4.19.12] K11848 USP20_33; ubiquitin carboxyl-terminal hydrolase 20/33 [EC:3.4.19.12] K11849 USP25; ubiquitin carboxyl-terminal hydrolase 25 [EC:3.4.19.12] K11849 USP25; ubiquitin carboxyl-terminal hydrolase 25 [EC:3.4.19.12] K11849 USP25; ubiquitin carboxyl-terminal hydrolase 25 [EC:3.4.19.12] K11849 USP25; ubiquitin carboxyl-terminal hydrolase 25 [EC:3.4.19.12] K11853 USP34; ubiquitin carboxyl-terminal hydrolase 34 [EC:3.4.19.12] K11855 USP36_42; ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12] K11855 USP36_42; ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12] K11857 USP47; ubiquitin carboxyl-terminal hydrolase 47 [EC:3.4.19.12] K11857 USP47; ubiquitin carboxyl-terminal hydrolase 47 [EC:3.4.19.12] K11869 USP40; ubiquitin carboxyl-terminal hydrolase 40 [EC:3.4.19.12] K11869 USP40; ubiquitin carboxyl-terminal hydrolase 40 [EC:3.4.19.12] K11874 UBP16; ubiquitin carboxyl-terminal hydrolase 16 [EC:3.4.19.12] K12655 OTUD5; OTU domain-containing protein 5 [EC:3.4.19.12] K12655 OTUD5; OTU domain-containing protein 5 [EC:3.4.19.12] K15235 JOSD; josephin [EC:3.4.19.12] K22647 MINDY3_4; ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:3.4.19.12] K22647 MINDY3_4; ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:3.4.19.12] K22763 DESI2; deubiquitinase DESI2 [EC:3.4.19.12] K22763 DESI2; deubiquitinase DESI2 [EC:3.4.19.12]
3.4.19.13 glutathione gamma-glutamate hydrolase
3.4.19.14 leukotriene-C4 hydrolase
3.4.19.15 desampylase
3.4.19.16 glucosinolate gamma-glutamyl hydrolase
3.4.21 Serine endopeptidases
3.4.22 Cysteine endopeptidases
3.4.23 Aspartic endopeptidases
3.4.24 Metalloendopeptidases
3.4.25 Threonine endopeptidases
3.4.26 Glutamic endopeptidases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.6 Acting on acid anhydrides
3.7 Acting on carbon-carbon bonds
3.8 Acting on halide bonds
3.9 Acting on phosphorus-nitrogen bonds
3.10 Acting on sulfur-nitrogen bonds
3.11 Acting on carbon-phosphorus bonds
3.12 Acting on sulfur-sulfur bonds
3.13 Acting on carbon-sulfur bonds
4. Lyases
5. Isomerases
6. Ligases
7. Translocases