DNA Repair and Recombination Proteins - Takifugu rubripes (torafugu)

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     KO
 Eukaryotic type
   SSBR (single strand breaks repair)
     Direct repair
     BER (base exicision repair)
       DNA glycosylases
         101077742 ung; uracil-DNA glycosylase
         101077906 ccno; cyclin-O
         101067104 G/T mismatch-specific thymine DNA glycosylase-like isoform X1
         101067326 G/T mismatch-specific thymine DNA glycosylase-like isoform X1
         101062311 mpg; DNA-3-methyladenine glycosylase isoform X1
         101073400 smug1; single-strand selective monofunctional uracil DNA glycosylase
         101076441 mutyh; adenine DNA glycosylase isoform X1
         101064232 mbd4; methyl-CpG-binding domain protein 4 isoform X1
         101072813 ogg1; N-glycosylase/DNA lyase
         101070130 neil1; endonuclease 8-like 1 isoform X2
         101065987 neil3; endonuclease 8-like 3
         101078258 nthl1; endonuclease III-like protein 1 isoform X2
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] 
K10861 UDG2; uracil-DNA glycosylase 2 [EC:3.2.2.-] 
K20813 TDG; thymine-DNA glycosylase [EC:3.2.2.29] 
K20813 TDG; thymine-DNA glycosylase [EC:3.2.2.29] 
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] 
K10800 SMUG1; single-strand selective monofunctional uracil DNA glycosylase [EC:3.2.2.-] 
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] 
K10801 MBD4; methyl-CpG-binding domain protein 4 [EC:3.2.2.-] 
K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] 
K10567 NEIL1; endonuclease VIII-like 1 [EC:3.2.2.- 4.2.99.18] 
K10569 NEIL3; endonuclease VIII-like 3 [EC:3.2.2.- 4.2.99.18] 
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] 
       AP endonucleases
       Long Patch-BER factors
       Short Patch-BER factors
       Other BER factors
     NER (nucleotide excision repair)
     MMR (mismatch excision repair)
   DSBR (double strand breaks repair)
   TLS (translesion DNA synthesis) factors
   Check point factors
   Other factors with a suspected DNA repair function
 
 Prokaryotic type
   SSBR (single strand breaks repair)
     Direct repair
     BER (base exicision repair)
       DNA glycosylases
         101077742 ung; uracil-DNA glycosylase
         101073400 smug1; single-strand selective monofunctional uracil DNA glycosylase
         101062311 mpg; DNA-3-methyladenine glycosylase isoform X1
         101076441 mutyh; adenine DNA glycosylase isoform X1
         101078258 nthl1; endonuclease III-like protein 1 isoform X2
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] 
K10800 SMUG1; single-strand selective monofunctional uracil DNA glycosylase [EC:3.2.2.-] 
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] 
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] 
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] 
       AP endonucleases
       RecJ
       DNA ligase
       DNA polymerase I
     NER (nucleotide excision repair)
     MMR (mismatch excision repair)
   DSBR (double strand breaks repair)
   TLS (translesion DNA synthesis) factors
   Other factors with a suspected DNA repair function

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Last updated: February 5, 2024