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 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:tte03030]
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03410 Base excision repair [PATH:tte03410]
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03420 Nucleotide excision repair [PATH:tte03420]
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03430 Mismatch repair [PATH:tte03430]
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03440 Homologous recombination [PATH:tte03440]
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 TTE1191 RecJ; Single-stranded DNA-specific exonuclease
TTE2108 RecJ2; Single-stranded DNA-specific exonuclease
TTE2780 Ssb3; Single-stranded DNA-binding protein
TTE2053 Ssb2; Single-stranded DNA-binding protein
TTE0004 RecF; Recombinational DNA repair ATPase
TTE0976 RecO; Recombinational DNA repair protein
TTE0041 RecR; Recombinational DNA repair protein
TTE1374 RecA; RecA/RadA recombinase
TTE1179 RuvA; Holliday junction resolvasome DNA-binding subunit
TTE1180 RuvB; Holliday junction resolvasome helicase subunit
TTE1178 RuvC; Holliday junction resolvasome endonuclease subunit
TTE1492 RecG; RecG-like helicase
TTE0489 RecD; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member
TTE2109 RecD2; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member
TTE1818 DnaE; DNA polymerase III alpha subunit
TTE1398 PolC; DNA polymerase III alpha subunit, the Gram-positive type
TTE0002 DnaN; DNA polymerase III beta subunit
TTE0039 DnaX; DNA polymerase III, gamma/tau subunits
TTE0942 HolA; DNA polymerase III delta subunit
TTE0097 HolB; ATPase involved in DNA replication
TTE1508 PriA; Primosomal protein N (replication factor Y) - superfamily II helicase
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:tte03000]
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03021 Transcription machinery [BR:tte03021]
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03019 Messenger RNA biogenesis [BR:tte03019]
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03041 Spliceosome
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03011 Ribosome [BR:tte03011]
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03009 Ribosome biogenesis [BR:tte03009]
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03016 Transfer RNA biogenesis [BR:tte03016]
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03012 Translation factors [BR:tte03012]
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03110 Chaperones and folding catalysts [BR:tte03110]
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04131 Membrane trafficking [BR:tte04131]
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04121 Ubiquitin system
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03051 Proteasome
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03032 DNA replication proteins [BR:tte03032]
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03036 Chromosome and associated proteins [BR:tte03036]
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03400 DNA repair and recombination proteins [BR:tte03400]
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TTE2519 Ada; Methylated DNA-protein cysteine methyltransferase
TTE0574 AlkA; 3-Methyladenine DNA glycosylase
TTE1769 Nth; predicted EndoIII-related endonuclease
TTE2249 MutT3; NTP pyrophosphohydrolases including oxidative damage repair enzymes
TTE1781 ADP-ribose pyrophosphatase
TTE2793 MutT4; NTP pyrophosphohydrolases including oxidative damage repair enzymes
TTE1384 Dut; dUTPase
TTE0077 Uracil-DNA glycosylase
TTE0091 Tag; 3-Methyladenine DNA glycosylase
TTE2226 XthA; Exonuclease III
TTE1276 Nfo; Endonuclease IV
TTE1191 RecJ; Single-stranded DNA-specific exonuclease
TTE2108 RecJ2; Single-stranded DNA-specific exonuclease
TTE0605 Lig; NAD-dependent DNA ligase (contains BRCT domain type II)
TTE1970 UvrA; Excinuclease ATPase subunit
TTE1971 UvrB; Helicase subunit of the DNA excision repair complex
TTE1966 UvrC; Nuclease subunit of the excinuclease complex
TTE0604 UvrD; Superfamily I DNA and RNA helicases
TTE2301 RpoB; DNA-directed RNA polymerase beta subunit/140 kD subunit (split gene in Mjan, Mthe, Aful)
TTE2300 RpoC; DNA-directed RNA polymerase beta subunit/160 kD subunit (split gene in archaea and Syn)
TTE2263 RpoA; DNA-directed RNA polymerase alpha subunit/40 kD subunit
TTE1510 RpoZ; DNA-directed RNA polymerase subunit K/omega
TTE2565 Mfd; Transcription-repair coupling factor - superfamily II helicase
TTE1357 MutS2; MutS-like ATPases involved in mismatch repair, family 2
TTE1906 MutS3; MutS-like ATPases involved in mismatch repair, family 2
TTE1685 MutS-like ATPases involved in mismatch repair, family 1
TTE0725 MutS; MutS-like ATPases involved in mismatch repair, family 2
TTE1358 MutL; DNA mismatch repair enzyme (predicted ATPase)
TTE1294 XseA; Exonuclease VII large subunit
TTE1295 XseB; Exonuclease VII small subunit
TTE1818 DnaE; DNA polymerase III alpha subunit
TTE1398 PolC; DNA polymerase III alpha subunit, the Gram-positive type
TTE0002 DnaN; DNA polymerase III beta subunit
TTE0942 HolA; DNA polymerase III delta subunit
TTE0097 HolB; ATPase involved in DNA replication
TTE0039 DnaX; DNA polymerase III, gamma/tau subunits
TTE2780 Ssb3; Single-stranded DNA-binding protein
TTE2053 Ssb2; Single-stranded DNA-binding protein
TTE0489 RecD; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member
TTE2109 RecD2; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member
TTE1374 RecA; RecA/RadA recombinase
TTE1179 RuvA; Holliday junction resolvasome DNA-binding subunit
TTE1180 RuvB; Holliday junction resolvasome helicase subunit
TTE1178 RuvC; Holliday junction resolvasome endonuclease subunit
TTE1508 PriA; Primosomal protein N (replication factor Y) - superfamily II helicase
TTE0266 SbcC; ATPase involved in DNA repair
TTE0265 SbcD; DNA repair exonuclease
TTE2325 Sms; predicted ATP-dependent serine protease
TTE0004 RecF; Recombinational DNA repair ATPase
TTE1492 RecG; RecG-like helicase
TTE0976 RecO; Recombinational DNA repair protein
TTE0041 RecR; Recombinational DNA repair protein
TTE1302 RecN; ATPases involved in DNA repair
TTE0264 RecB; ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)
TTE0263 ATP-dependent nuclease
TTE2658 conserved hypothetical protein
TTE0011 GyrA; DNA gyrase (topoisomerase II) A subunit
TTE0010 GyrB; DNA gyrase (topoisomerase II) B subunit
TTE1449 TopA; Topoisomerase IA
TTE2453 HimA; Bacterial nucleoid DNA-binding protein
TTE0254 DinP; Nucleotidyltransferase/DNA polymerase involved in DNA repair
TTE1373 OraA; uncharacterized BCR
TTE2516 Pol4; DNA polymerase IV (family X)
TTE2336 NrdA; Ribonucleotide reductase alpha subunit
TTE1391 Exopolyphosphatase-related proteins
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
K15342 cas1; CRISP-associated protein Cas1
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03565 recX; regulatory protein
K02347 polX; DNA polymerase (family X)
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
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03029 Mitochondrial biogenesis [BR:tte03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Caldanaerobacter subterraneus subsp. tengcongensis