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09100 Metabolism
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09101 Carbohydrate metabolism
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09102 Energy metabolism
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00190 Oxidative phosphorylation [PATH:xax00190]
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00195 Photosynthesis
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00196 Photosynthesis - antenna proteins
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00710 Carbon fixation in photosynthetic organisms
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00720 Carbon fixation pathways in prokaryotes
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00680 Methane metabolism [PATH:xax00680]
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00910 Nitrogen metabolism [PATH:xax00910]
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00920 Sulfur metabolism [PATH:xax00920]
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XACM_1000 cysP; ABC transporter sulfate binding protein
XACM_1001 cysU; ABC transporter sulfate permease
XACM_1002 cysW; ABC transporter sulfate permease
XACM_1003 cysA; sulfate ABC transporter ATP-binding protein
XACM_0827 ABC transporter substrate-binding protein
XACM_0825 ABC transporter permease
XACM_0826 ABC transporter ATP-binding protein
XACM_0320 NADH-dependent FMN reductase
XACM_3217 cysN; bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein
XACM_3218 cysD; sulfate adenylyltransferase subunit 2
XACM_2986 cysQ; sulfite synthesis pathway protein
XACM_3221 cysH; phosphoadenosine phosphosulfate reductase
XACM_2879 sulfite reductase
XACM_3219 cysJ; NADPH-sulfite reductase flavoprotein subunit
XACM_3906 Sulfite reductase flavoprotein
XACM_3220 cysI; sulfite reductase subunit beta
XACM_1557 sseA; thiosulfate sulfurtransferase
XACM_3230 cysK; cysteine synthase
XACM_3522 cysteine synthase
XACM_2340 metX; homoserine O-acetyltransferase
XACM_2962 homoserine O-acetyltransferase
XACM_2961 metB; cystathionine gamma-synthase
XACM_2545 acyl-CoA dehydrogenase
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K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
K02046 cysU; sulfate/thiosulfate transport system permease protein
K02047 cysW; sulfate/thiosulfate transport system permease protein
K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
K15553 ssuA; sulfonate transport system substrate-binding protein
K15554 ssuC; sulfonate transport system permease protein
K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
K00299 ssuE; FMN reductase [EC:1.5.1.38]
K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
K01738 cysK; cysteine synthase [EC:2.5.1.47]
K01738 cysK; cysteine synthase [EC:2.5.1.47]
K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
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09103 Lipid metabolism
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09104 Nucleotide metabolism
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09105 Amino acid metabolism
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09106 Metabolism of other amino acids
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09107 Glycan biosynthesis and metabolism
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09108 Metabolism of cofactors and vitamins
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09109 Metabolism of terpenoids and polyketides
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09110 Biosynthesis of other secondary metabolites
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09111 Xenobiotics biodegradation and metabolism
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09112 Not included in regular maps
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09120 Genetic Information Processing
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:xax03000]
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03021 Transcription machinery [BR:xax03021]
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03019 Messenger RNA biogenesis [BR:xax03019]
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03041 Spliceosome
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03011 Ribosome [BR:xax03011]
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03009 Ribosome biogenesis [BR:xax03009]
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03016 Transfer RNA biogenesis [BR:xax03016]
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XACM_2391 ribonuclease
XACM_0717 cca; multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase
XACM_3836 hypothetical protein
XACM_2793 gltX; glutamyl-tRNA synthetase
XACM_3462 proS; prolyl-tRNA synthetase
XACM_1230 ileS; isoleucyl-tRNA synthetase
XACM_2722 leuS; leucyl-tRNA synthetase
XACM_1370 metG; methionyl-tRNA synthetase
XACM_0875 glnS; glutaminyl-tRNA synthetase
XACM_3810 argS; arginyl-tRNA synthetase
XACM_1897 lysS; lysyl-tRNA synthetase
XACM_3074 aspS; aspartyl-tRNA synthetase
XACM_1764 alaS; alanyl-tRNA synthetase
XACM_1590 asnC; asparaginyl-tRNA synthetase
XACM_2576 thrS; threonyl-tRNA synthetase
XACM_1623 serS; seryl-tRNA synthetase
XACM_2363 cysS; cysteinyl-tRNA synthetase
XACM_3453 valS; valyl-tRNA synthetase
XACM_1852 hisS; histidyl-tRNA synthetase
XACM_2572 pheS; phenylalanyl-tRNA synthetase subunit alpha
XACM_2571 pheT; phenylalanyl-tRNA synthetase subunit beta
XACM_3791 tyrS; tyrosyl-tRNA synthetase
XACM_3874 trpS; tryptophanyl-tRNA synthetase
XACM_3690 D-tyrosyl-tRNA(Tyr) deacylase
XACM_1079 histidine triad-like protein
XACM_3197 trmB; tRNA (guanine-N(7)-)-methyltransferase
XACM_2661 truA; tRNA pseudouridine synthase A
XACM_2624 truB; tRNA pseudouridine synthase B
XACM_1744 truD; tRNA pseudouridine synthase D
XACM_3708 yrdC; translation factor (SUA5)
XACM_1755 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase
XACM_4258 trmE; tRNA modification GTPase TrmE
XACM_0365 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
XACM_2986 cysQ; sulfite synthesis pathway protein
XACM_4261 rnpA; ribonuclease P
XACM_1540 rnt; ribonuclease T
XACM_3285 rph; ribonuclease PH
XACM_2419 rnD; ribonuclease D
XACM_1350 2'-5' RNA ligase LigT
XACM_4185 RNA:NAD 2'-phosphotransferase
XACM_0736 yjjK; ABC transporter ATP-binding protein
XACM_4083 glyQ; glycyl-tRNA synthetase subunit alpha
XACM_4082 glyS; glycyl-tRNA synthetase subunit beta
XACM_2405 glutamyl-tRNA synthetase
XACM_0910 hypothetical protein
XACM_2144 Cytosine/adenosine deaminase
XACM_3895 dusA; tRNA-dihydrouridine synthase A
XACM_0812 nifR3 family TIM-barrel protein
XACM_2440 miaB; (dimethylallyl)adenosine tRNA methylthiotransferase
XACM_1271 trmD; tRNA (guanine-N(1)-)-methyltransferase
XACM_3210 tRNA/rRNA methyltransferase
XACM_2388 tRNA/rRNA methyltransferase
XACM_0216 tRNA/rRNA methyltransferase
XACM_0230 truC; pseudouridylate synthase
XACM_4200 pseudouridylate synthase
XACM_2024 mnmA; tRNA-specific 2-thiouridylase MnmA
XACM_4098 C32 tRNA thiolase
XACM_1591 iron-sulfur cluster assembly accessory protein
XACM_2181 aminomethyltransferase
XACM_2494 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase
XACM_3056 ATPase (PP-loop superfamily)
XACM_3511 ptps; 6-pyruvoyl tetrahydrobiopterin synthase
XACM_3058 Organic radical activating enzyme
XACM_3740 queF; 7-cyano-7-deazaguanine reductase
XACM_2414 iron-sulfur cluster-binding protein
XACM_0318 hypothetical protein
XACM_2493 tgt; queuine tRNA-ribosyltransferase
XACM_2701 mesJ; cell cycle protein
XACM_3026 metal-dependent protease, molecular chaperone
XACM_3765 gcp; DNA-binding/iron metalloprotein/AP endonuclease
XACM_2412 ATPase or kinase
XACM_1457 molybdopterin biosynthesis protein
XACM_1536 vacB; RNase R
XACM_2622 pnp; polynucleotide phosphorylase/polyadenylase
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K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
K03683 rnt; ribonuclease T [EC:3.1.13.-]
K00989 rph; ribonuclease PH [EC:2.7.7.56]
K03684 rnd; ribonuclease D [EC:3.1.13.5]
K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-]
K06020 ettA; energy-dependent translational throttle protein EttA
K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
K13628 iscA; iron-sulfur cluster assembly protein
K06980 ygfZ; tRNA-modifying protein YgfZ
K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
K12573 rnr; ribonuclease R [EC:3.1.13.1]
K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
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03012 Translation factors [BR:xax03012]
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03110 Chaperones and folding catalysts [BR:xax03110]
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04131 Membrane trafficking [BR:xax04131]
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04121 Ubiquitin system
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03051 Proteasome [BR:xax03051]
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03032 DNA replication proteins [BR:xax03032]
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03036 Chromosome and associated proteins [BR:xax03036]
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03400 DNA repair and recombination proteins [BR:xax03400]
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03029 Mitochondrial biogenesis [BR:xax03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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