Messenger RNA Biogenesis - Zea mays (maize)

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     KO
 Eukaryotic type
   mRNA processing factors
   mRNA surveillance and transport factors
     Transport factors
       EJC complex
       TREX complex
       TREX-2 complex
       Nuclear pore complex
       Ran-mediated transport factors
       eIF4F and regulatory proteins
         541708 eukaryotic translation initiation factor isoform 4E-2
         542608 eukaryotic translation initiation factor 4E-1
         100193783 Eukaryotic translation initiation factor NCBP
         100283214 eukaryotic translation initiation factor 4E-1
         100284181 uncharacterized protein LOC100284181
         542348 translational initiation factor eIF-4A
         100284697 uncharacterized protein LOC100284697
         103627096 ATP-dependent RNA helicase DBP5
         541649 translation initiation factor
         100382039 uncharacterized protein LOC100382039
         103646262 eukaryotic translation initiation factor
         103647746 eukaryotic translation initiation factor 4G isoform X1
         103641899 eukaryotic translation initiation factor 4G isoform X1
         103633283 eukaryotic translation initiation factor 4G
         100502300 uncharacterized protein LOC100502300
         100191727 putative DEAD-box ATP-dependent RNA helicase family protein
         100501699 uncharacterized protein LOC100501699
         100279527 putative DEAD-box ATP-dependent RNA helicase family protein
         100381785 uncharacterized protein LOC100381785
         100280040 uncharacterized protein LOC100280040
         103636339 protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1 isoform X1
         100285420 uncharacterized protein LOC100285420
         100282980 uncharacterized protein LOC100282980
         100502035 uncharacterized protein LOC100502035
         100381531 uncharacterized protein LOC100381531
         103639307 polyadenylate-binding protein 7
         103641822 polyadenylate-binding protein 2
         100383542 uncharacterized protein LOC100383542
         100383871 uncharacterized protein LOC100383871
         100281351 ligatin
         100192042 uncharacterized protein LOC100192042
         100280975 uncharacterized protein LOC100280975
K03259 EIF4E; translation initiation factor 4E 
K03259 EIF4E; translation initiation factor 4E 
K03259 EIF4E; translation initiation factor 4E 
K03259 EIF4E; translation initiation factor 4E 
K03259 EIF4E; translation initiation factor 4E 
K03257 EIF4A; translation initiation factor 4A 
K03257 EIF4A; translation initiation factor 4A 
K03257 EIF4A; translation initiation factor 4A 
K03257 EIF4A; translation initiation factor 4A 
K03260 EIF4G; translation initiation factor 4G 
K03260 EIF4G; translation initiation factor 4G 
K03260 EIF4G; translation initiation factor 4G 
K03260 EIF4G; translation initiation factor 4G 
K03260 EIF4G; translation initiation factor 4G 
K05749 CYFIP; cytoplasmic FMR1 interacting protein 
K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:3.6.4.13] 
K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:3.6.4.13] 
K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:3.6.4.13] 
K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:3.6.4.13] 
K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein 
K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein 
K13126 PABPC; polyadenylate-binding protein 
K13126 PABPC; polyadenylate-binding protein 
K13126 PABPC; polyadenylate-binding protein 
K13126 PABPC; polyadenylate-binding protein 
K13126 PABPC; polyadenylate-binding protein 
K13126 PABPC; polyadenylate-binding protein 
K13126 PABPC; polyadenylate-binding protein 
K12599 SKI2; antiviral helicase SKI2 [EC:3.6.4.13] 
K07575 MCTS; malignant T-cell-amplified sequence 
K24272 DENR; density-regulated protein 
K24272 DENR; density-regulated protein 
       APOBEC1-ACF complex
       Other transport factors
     Surveillance factors
     Factors involved in mRNA localization
     mRNA cycle factors
       Common to processing body (P body) and stress granule
         100304327 uncharacterized protein LOC100304327
         100279776 uncharacterized protein LOC100279776
         100381552 putative argonaute family protein
         100382704 uncharacterized protein LOC100382704
         100217027 uncharacterized protein LOC100217027
         100383316 argonaute104
         100193970 uncharacterized protein LOC100193970
         103626484 protein argonaute 1D isoform X4
         103641968 protein argonaute 1B isoform X1
         103647664 protein argonaute 18
         103642054 protein argonaute 2
         103629289 protein argonaute 1B
         103629795 protein argonaute PNH1 isoform X1
         100384259 protein argonaute 12 isoform X3
         103625809 protein argonaute MEL1 isoform X2
         103636643 protein argonaute 7
         109943529 protein argonaute 12
         103633113 protein argonaute 18
         100384364 uncharacterized protein LOC100384364
         100383767 uncharacterized protein LOC100383767
         541708 eukaryotic translation initiation factor isoform 4E-2
         542608 eukaryotic translation initiation factor 4E-1
         100193783 Eukaryotic translation initiation factor NCBP
         100283214 eukaryotic translation initiation factor 4E-1
         100284181 uncharacterized protein LOC100284181
         100383288 regulator of nonsense transcripts 1 homolog isoform X1
         100304236 uncharacterized protein LOC100304236
         100191727 putative DEAD-box ATP-dependent RNA helicase family protein
         100501699 uncharacterized protein LOC100501699
         100279527 putative DEAD-box ATP-dependent RNA helicase family protein
         100381785 uncharacterized protein LOC100381785
         100272835 putative DEAD-box ATP-dependent RNA helicase family protein
         100282580 ATP-dependent RNA helicase dhh1
         100194030 uncharacterized protein LOC100194030
         103630653 vegetative cell wall protein gp1
         100191766 uncharacterized protein LOC100191766
         100192851 uncharacterized protein LOC100192851
         100272404 protein decapping 5
         100382450 putative RNA helicase family protein
         103631746 probable RNA helicase SDE3
         100381988 uncharacterized protein LOC100381988
         100273670 transportin-1 isoform X1
         103643975 serine/threonine-protein kinase SMG1
         100278146 protein SMG7
         100384817 uncharacterized protein LOC100384817
         100282019 nucleic acid binding f
         100193339 uncharacterized protein LOC100193339
         103639292 heterogeneous nuclear ribonucleoprotein 1-like
         100382538 uncharacterized protein LOC100382538
         100191295 uncharacterized protein LOC100191295
         100191146 uncharacterized protein LOC100191146
         100284207 glycine-rich RNA-binding protein 7
         100191462 uncharacterized protein LOC100191462
         100281694 uncharacterized protein LOC100281694
         100284566 heterogeneous nuclear ribonucleoprotein A3-like protein 2
         100382178 UBP1-associated protein 2C
         100283567 uncharacterized protein LOC100283567
         100273471 uncharacterized protein LOC100273471
         100279268 uncharacterized protein LOC100279268
         100217268 uncharacterized protein LOC100217268
         103645111 LOW QUALITY PROTEIN: glycine-rich RNA-binding protein 3, mitochondrial
         100502412 uncharacterized protein LOC100502412
         100273740 uncharacterized protein LOC100273740
         103631737 la-related protein 1C isoform X1
         100279569 uncharacterized protein LOC100279569
         100193028 uncharacterized protein LOC100193028
         100384071 uncharacterized protein LOC100384071
         103633620 la-related protein 1B
K11593 ELF2C; eukaryotic translation initiation factor 2C 
K11593 ELF2C; eukaryotic translation initiation factor 2C 
K11593 ELF2C; eukaryotic translation initiation factor 2C 
K11593 ELF2C; eukaryotic translation initiation factor 2C 
K11593 ELF2C; eukaryotic translation initiation factor 2C 
K11593 ELF2C; eukaryotic translation initiation factor 2C 
K11593 ELF2C; eukaryotic translation initiation factor 2C 
K11593 ELF2C; eukaryotic translation initiation factor 2C 
K11593 ELF2C; eukaryotic translation initiation factor 2C 
K11593 ELF2C; eukaryotic translation initiation factor 2C 
K11593 ELF2C; eukaryotic translation initiation factor 2C 
K11593 ELF2C; eukaryotic translation initiation factor 2C 
K11593 ELF2C; eukaryotic translation initiation factor 2C 
K11593 ELF2C; eukaryotic translation initiation factor 2C 
K11593 ELF2C; eukaryotic translation initiation factor 2C 
K11593 ELF2C; eukaryotic translation initiation factor 2C 
K11593 ELF2C; eukaryotic translation initiation factor 2C 
K11593 ELF2C; eukaryotic translation initiation factor 2C 
K11593 ELF2C; eukaryotic translation initiation factor 2C 
K11593 ELF2C; eukaryotic translation initiation factor 2C 
K03259 EIF4E; translation initiation factor 4E 
K03259 EIF4E; translation initiation factor 4E 
K03259 EIF4E; translation initiation factor 4E 
K03259 EIF4E; translation initiation factor 4E 
K03259 EIF4E; translation initiation factor 4E 
K14326 UPF1; regulator of nonsense transcripts 1 [EC:3.6.4.13 5.6.2.3] 
K14326 UPF1; regulator of nonsense transcripts 1 [EC:3.6.4.13 5.6.2.3] 
K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:3.6.4.13] 
K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:3.6.4.13] 
K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:3.6.4.13] 
K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:3.6.4.13] 
K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:3.6.4.13] 
K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:3.6.4.13] 
K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:3.6.4.13] 
K18749 LSM14; protein LSM14 
K18749 LSM14; protein LSM14 
K18749 LSM14; protein LSM14 
K18749 LSM14; protein LSM14 
K18422 MOV10; helicase MOV-10 [EC:3.6.4.13] 
K18422 MOV10; helicase MOV-10 [EC:3.6.4.13] 
K18752 TNPO1; transportin-1 
K18752 TNPO1; transportin-1 
K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] 
K14409 SMG7; protein SMG7 
K14409 SMG7; protein SMG7 
K18753 ZFP36L; butyrate response factor 
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
K18757 LARP1; la-related protein 1 
K18757 LARP1; la-related protein 1 
K18757 LARP1; la-related protein 1 
K18757 LARP1; la-related protein 1 
K18757 LARP1; la-related protein 1 
K18757 LARP1; la-related protein 1 
K18757 LARP1; la-related protein 1 
       P-body specific factors
       Stress granule specific factors
   mRNA degradation factors
 
 Prokaryotic type

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Last updated: December 12, 2023