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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:zmo03030]
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03410 Base excision repair [PATH:zmo03410]
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03420 Nucleotide excision repair [PATH:zmo03420]
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03430 Mismatch repair [PATH:zmo03430]
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03440 Homologous recombination [PATH:zmo03440]
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 ZMO1231 single-stranded-DNA-specific exonuclease RecJ
ZMO1542 single-strand binding protein
ZMO1584 DNA replication and repair protein RecF
ZMO0673 DNA repair protein RecO
ZMO0812 recombination protein RecR
ZMO1166 recA protein
ZMO0227 DNA polymerase I
ZMO0155 Holliday junction DNA helicase RuvA
ZMO0158 Holliday junction DNA helicase RuvB
ZMO0154 crossover junction endodeoxyribonuclease RuvC
ZMO1644 DEAD/DEAH box helicase domain protein
ZMO1538 DNA polymerase III, alpha subunit
ZMO0980 DNA polymerase III, beta subunit
ZMO0861 DNA polymerase III, subunits gamma and tau
ZMO1433 DNA polymerase III, delta subunit
ZMO1091 DNA polymerase III, delta prime subunit
ZMO0039 DNA polymerase III, epsilon subunit
ZMO1308 DNA polymerase III chi subunit HolC
ZMO1921 primosomal protein N'
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:zmo03000]
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03021 Transcription machinery [BR:zmo03021]
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03019 Messenger RNA biogenesis [BR:zmo03019]
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03041 Spliceosome
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03011 Ribosome [BR:zmo03011]
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03009 Ribosome biogenesis [BR:zmo03009]
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03016 Transfer RNA biogenesis [BR:zmo03016]
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03012 Translation factors [BR:zmo03012]
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03110 Chaperones and folding catalysts [BR:zmo03110]
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04131 Membrane trafficking [BR:zmo04131]
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04121 Ubiquitin system
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03051 Proteasome
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03032 DNA replication proteins [BR:zmo03032]
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03036 Chromosome and associated proteins [BR:zmo03036]
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03400 DNA repair and recombination proteins [BR:zmo03400]
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ZMO1989 methylated-DNA/protein-cysteine methyltransferase
ZMO1450 Deoxyribodipyrimidine photo-lyase
ZMO1677 A/G-specific adenine glycosylase
ZMO0706 endonuclease III
ZMO0127 S1/P1 nuclease
ZMO1191 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
ZMO1648 Uracil-DNA glycosylase superfamily
ZMO1114 phage SPO1 DNA polymerase-related protein
ZMO1185 Uracil-DNA glycosylase superfamily
ZMO0377 HhH-GPD family protein
ZMO1187 formamidopyrimidine-DNA glycosylase
ZMO1401 exodeoxyribonuclease III Xth
ZMO1699 exodeoxyribonuclease III Xth
ZMO1231 single-stranded-DNA-specific exonuclease RecJ
ZMO0364 DNA ligase, NAD-dependent
ZMO0227 DNA polymerase I
ZMO1588 excinuclease ABC, A subunit
ZMO0362 excinuclease ABC, B subunit
ZMO0672 excinuclease ABC, C subunit
ZMO0574 UvrD/REP helicase
ZMO0731 DNA-directed RNA polymerase, beta subunit
ZMO0732 DNA-directed RNA polymerase, beta' subunit
ZMO0541 DNA-directed RNA polymerase, alpha subunit
ZMO1720 DNA-directed RNA polymerase, omega subunit
ZMO1646 transcription-repair coupling factor
ZMO1907 DNA mismatch repair protein MutS
ZMO0354 DNA mismatch repair protein MutL
ZMO0300 exodeoxyribonuclease VII, large subunit
ZMO0856 exodeoxyribonuclease VII, small subunit
ZMO1538 DNA polymerase III, alpha subunit
ZMO0980 DNA polymerase III, beta subunit
ZMO1308 DNA polymerase III chi subunit HolC
ZMO1433 DNA polymerase III, delta subunit
ZMO1091 DNA polymerase III, delta prime subunit
ZMO0039 DNA polymerase III, epsilon subunit
ZMO0861 DNA polymerase III, subunits gamma and tau
ZMO1542 single-strand binding protein
ZMO1166 recA protein
ZMO0155 Holliday junction DNA helicase RuvA
ZMO0158 Holliday junction DNA helicase RuvB
ZMO0154 crossover junction endodeoxyribonuclease RuvC
ZMO1921 primosomal protein N'
ZMO0589 DNA repair protein RadA
ZMO1584 DNA replication and repair protein RecF
ZMO1644 DEAD/DEAH box helicase domain protein
ZMO0673 DNA repair protein RecO
ZMO0812 recombination protein RecR
ZMO1956 DNA repair protein RecN
ZMO1098 double-strand break repair helicase AddA
ZMO1099 double-strand break repair protein AddB
ZMO0680 CRISPR-associated protein Cas1
ZMO0692 DNA gyrase, A subunit
ZMO1583 DNA gyrase, B subunit
ZMO1193 DNA topoisomerase I
ZMO0244 histone family protein DNA-binding protein
ZMO1126 transcriptional regulator, Fis family
ZMO1122 integration host factor, alpha subunit
ZMO1801 integration host factor, beta subunit
ZMO0199 SOS-response transcriptional repressor, LexA
ZMO0705 regulatory protein RecX
ZMO0892 helicase c2
ZMO1039 ribonucleoside-diphosphate reductase, alpha subunit
ZMO0443 Ribonucleoside-diphosphate reductase
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K05986 NUCS; nuclease S1 [EC:3.1.30.1]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
K15342 cas1; CRISP-associated protein Cas1
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03565 recX; regulatory protein
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:zmo03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Zymomonas mobilis subsp. mobilis ZM4