| T01001 | hsa | Homo sapiens (human) |
| T01005 | ptr | Pan troglodytes (chimpanzee) |
| T02283 | pps | Pan paniscus (bonobo) |
| T02442 | ggo | Gorilla gorilla gorilla (western lowland gorilla) |
| T01416 | pon | Pongo abelii (Sumatran orangutan) |
| T03265 | nle | Nomascus leucogenys (northern white-cheeked gibbon) |
| T01028 | mcc | Macaca mulatta (rhesus monkey) |
| T02918 | mcf | Macaca fascicularis (crab-eating macaque) |
| T04361 | csab | Chlorocebus sabaeus (green monkey) |
| T03989 | rro | Rhinopithecus roxellana (golden snub-nosed monkey) |
| T04641 | rbb | Rhinopithecus bieti (black snub-nosed monkey) |
| T03264 | cjc | Callithrix jacchus (white-tufted-ear marmoset) |
| T04350 | sbq | Saimiri boliviensis boliviensis (Bolivian squirrel monkey) |
| T01002 | mmu | Mus musculus (mouse) |
| T01003 | rno | Rattus norvegicus (rat) |
| T02813 | cge | Cricetulus griseus (Chinese hamster) |
| T03372 | ngi | Nannospalax galili (Upper Galilee mountains blind mole rat) |
| T02812 | hgl | Heterocephalus glaber (naked mole rat) |
| T04791 | ccan | Castor canadensis (American beaver) |
| T03373 | ocu | Oryctolagus cuniculus (rabbit) |
| T02978 | tup | Tupaia chinensis (Chinese tree shrew) |
| T01007 | cfa | Canis familiaris (dog) |
| T01329 | aml | Ailuropoda melanoleuca (giant panda) |
| T03271 | umr | Ursus maritimus (polar bear) |
| T02385 | fca | Felis catus (domestic cat) |
| T02988 | ptg | Panthera tigris altaica (Amur tiger) |
| T04657 | aju | Acinonyx jubatus (cheetah) |
| T01008 | bta | Bos taurus (cow) |
| T02919 | bom | Bos mutus (wild yak) |
| T04792 | biu | Bos indicus (zebu cattle) |
| T02909 | phd | Pantholops hodgsonii (chiru) |
| T02910 | chx | Capra hircus (goat) |
| T03117 | oas | Ovis aries (sheep) |
| T01009 | ssc | Sus scrofa (pig) |
| T02979 | cfr | Camelus ferus (Wild Bactrian camel) |
| T04642 | cdk | Camelus dromedarius (Arabian camel) |
| T03086 | bacu | Balaenoptera acutorostrata scammoni (minke whale) |
| T03090 | lve | Lipotes vexillifer (Yangtze River dolphin) |
| T01058 | ecb | Equus caballus (horse) |
| T04644 | epz | Equus przewalskii (Przewalski's horse) |
| T04645 | eai | Equus asinus (ass) |
| T02920 | myb | Myotis brandtii (Brandt's bat) |
| T02992 | myd | Myotis davidii |
| T04661 | hai | Hipposideros armiger (great roundleaf bat) |
| T04863 | rss | Rhinolophus sinicus (Chinese rufous horseshoe bat) |
| T02993 | pale | Pteropus alecto (black flying fox) |
| T04351 | lav | Loxodonta africana (African savanna elephant) |
| T01031 | mdo | Monodelphis domestica (opossum) |
| T02286 | shr | Sarcophilus harrisii (Tasmanian devil) |
| T01045 | oaa | Ornithorhynchus anatinus (platypus) |
| T01006 | gga | Gallus gallus (chicken) |
| T01523 | mgp | Meleagris gallopavo (turkey) |
| T04297 | cjo | Coturnix japonica (Japanese quail) |
| T02816 | apla | Anas platyrhynchos (mallard) |
| T04896 | acyg | Anser cygnoides domesticus (swan goose) |
| T01082 | tgu | Taeniopygia guttata (zebra finch) |
| T03755 | gfr | Geospiza fortis (medium ground-finch) |
| T02815 | fab | Ficedula albicollis (collared flycatcher) |
| T02921 | phi | Pseudopodoces humilis (Tibetan ground-tit) |
| T03546 | ccw | Corvus cornix (hooded crow) |
| T02856 | fpg | Falco peregrinus (peregrine falcon) |
| T02911 | fch | Falco cherrug (Saker falcon) |
| T02912 | clv | Columba livia (rock pigeon) |
| T04298 | aam | Apteryx australis mantelli (brown kiwi) |
| T02922 | asn | Alligator sinensis (Chinese alligator) |
| T03087 | amj | Alligator mississippiensis (American alligator) |
| T02980 | pss | Pelodiscus sinensis (Chinese soft-shelled turtle) |
| T02989 | cmy | Chelonia mydas (green sea turtle) |
| T04662 | cpic | Chrysemys picta (western painted turtle) |
| T01608 | acs | Anolis carolinensis (green anole) |
| T03091 | pbi | Python bivittatus (Burmese python) |
| T04299 | gja | Gekko japonicus |
| T01010 | xla | Xenopus laevis (African clawed frog) |
| T01011 | xtr | Xenopus tropicalis (western clawed frog) |
| T04897 | npr | Nanorana parkeri |
| T01004 | dre | Danio rerio (zebrafish) |
| T04916 | srx | Sinocyclocheilus rhinocerous |
| T04917 | sanh | Sinocyclocheilus anshuiensis |
| T04918 | sgh | Sinocyclocheilus grahami |
| T04658 | ipu | Ictalurus punctatus (channel catfish) |
| T02386 | tru | Takifugu rubripes (torafugu) |
| T04346 | tng | Tetraodon nigroviridis (spotted green pufferfish) |
| T04659 | lco | Larimichthys crocea (large yellow croaker) |
| T04920 | ncc | Notothenia coriiceps (black rockcod) |
| T02814 | mze | Maylandia zebra (zebra mbuna) |
| T02443 | ola | Oryzias latipes (Japanese medaka) |
| T02923 | xma | Xiphophorus maculatus (southern platyfish) |
| T04866 | csem | Cynoglossus semilaevis (tongue sole) |
| T04895 | lcf | Lates calcarifer (barramundi perch) |
| T04363 | sasa | Salmo salar (Atlantic salmon) |
| T04894 | els | Esox lucius (northern pike) |
| T04919 | sfm | Scleropages formosus (Asian bonytongue) |
| T02913 | lcm | Latimeria chalumnae (coelacanth) |
| T03088 | cmk | Callorhinchus milii (elephant shark) |
| T01074 | bfo | Branchiostoma floridae (Florida lancelet) |
| T01056 | cin | Ciona intestinalis (sea squirt) |
| T01019 | spu | Strongylocentrotus purpuratus (purple sea urchin) |
| T04123 | sko | Saccoglossus kowalevskii (acorn worm) |
| T00030 | dme | Drosophila melanogaster (fruit fly) |
| T01032 | dpo | Drosophila pseudoobscura pseudoobscura |
| T01059 | dan | Drosophila ananassae |
| T01060 | der | Drosophila erecta |
| T01063 | dpe | Drosophila persimilis |
| T01064 | dse | Drosophila sechellia |
| T01065 | dsi | Drosophila simulans |
| T01067 | dwi | Drosophila willistoni |
| T01068 | dya | Drosophila yakuba |
| T01061 | dgr | Drosophila grimshawi |
| T01062 | dmo | Drosophila mojavensis |
| T01066 | dvi | Drosophila virilis |
| T03448 | mde | Musca domestica (house fly) |
| T01036 | aga | Anopheles gambiae (mosquito) |
| T01053 | aag | Aedes aegypti (yellow fever mosquito) |
| T01079 | cqu | Culex quinquefasciatus (southern house mosquito) |
| T01057 | ame | Apis mellifera (honey bee) |
| T04362 | bim | Bombus impatiens (common eastern bumble bee) |
| T04364 | bter | Bombus terrestris (buff-tailed bumblebee) |
| T03916 | soc | Solenopsis invicta (red fire ant) |
| T03917 | aec | Acromyrmex echinatior (Panamanian leafcutter ant) |
| T04923 | acep | Atta cephalotes (leaf cutting ant) |
| T04903 | pbar | Pogonomyrmex barbatus (red harvester ant) |
| T03918 | hst | Harpegnathos saltator (Jerdon's jumping ant) |
| T03919 | cfo | Camponotus floridanus (Florida carpenter ant) |
| T04898 | lhu | Linepithema humile (Argentine ant) |
| T01081 | nvi | Nasonia vitripennis (jewel wasp) |
| T01046 | tca | Tribolium castaneum (red flour beetle) |
| T04899 | dpa | Dendroctonus ponderosae (mountain pine beetle) |
| T04922 | nvl | Nicrophorus vespilloides |
| T02817 | bmor | Bombyx mori (domestic silkworm) |
| T04344 | dpl | Danaus plexippus (monarch butterfly) |
| T03915 | pxy | Plutella xylostella (diamondback moth) |
| T01076 | api | Acyrthosiphon pisum (pea aphid) |
| T04900 | dnx | Diuraphis noxia (Russian wheat aphid) |
| T01223 | phu | Pediculus humanus corporis (human body louse) |
| T04347 | dpx | Daphnia pulex (common water flea) |
| T01131 | isc | Ixodes scapularis (black-legged tick) |
| T04901 | tut | Tetranychus urticae (two-spotted spider mite) |
| T00019 | cel | Caenorhabditis elegans (nematode) |
| T01054 | cbr | Caenorhabditis briggsae |
| T04867 | nai | Necator americanus |
| T01050 | bmy | Brugia malayi (filaria) |
| T02664 | loa | Loa loa (eye worm) |
| T01609 | tsp | Trichinella spiralis |
| T03272 | hro | Helobdella robusta |
| T03273 | lgi | Lottia gigantea (owl limpet) |
| T03920 | crg | Crassostrea gigas (Pacific oyster) |
| T04127 | obi | Octopus bimaculoides |
| T04921 | lak | Lingula anatina |
| T01095 | smm | Schistosoma mansoni |
| T04902 | ovi | Opisthorchis viverrini |
| T01037 | nve | Nematostella vectensis (sea anemone) |
| T04352 | adf | Acropora digitifera (stony coral) |
| T01080 | hmg | Hydra vulgaris |
| T01069 | tad | Trichoplax adhaerens |
| T02284 | aqu | Amphimedon queenslandica (sponge) |
Organism group: Animals