KEGG Modules

Energy metabolism

 Carbon fixation

 Nitrogen metabolism

 Methane metabolism

 Sulfur metabolism
M00176 Sulfur reduction, sulfate => H2S [PATH: bup00920]

Carbohydrate and lipid metabolism

 Central carbohydrate metabolism
M00002 Glycolysis, core module involving three-carbon compounds [PATH: bup00010]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: bup00010 bup00020 bup00620]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: bup00030]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: bup00030]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: bup00030]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: bup00030 bup00230]


 Other carbohydrate metabolism

 Fatty acid metabolism
M00083 Fatty acid biosynthesis, elongation [PATH: bup00061]


 Lipid metabolism

 Lipopolysaccharide metabolism

 Sugar metabolism

 Glycan metabolism

 Glycosaminoglycan metabolism

 Terpenoid backbone biosynthesis

 Sterol biosynthesis

 Other terpenoid biosynthesis
Nucleotide and amino acid metabolism

 Purine metabolism
M00049 Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH: bup00230]


 Pyrimidine metabolism
M00051 Uridine monophosphate biosynthesis, glutamine (+ PRPP) => UMP [PATH: bup00240]


 Serine and threonine metabolism
M00018 Threonine biosynthesis, apartate => homoserine => threonine [PATH: bup00260]


 Cysteine and methionine metabolism

 Branched-chain amino acid metabolism

 Lysine metabolism
M00016 Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH: bup00300]


 Arginine and proline metabolism
M00028 Ornithine biosynthesis, glutamate => ornithine [PATH: bup00330]


 Histidine metabolism

 Aromatic amino acid metabolism
M00022 Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH: bup00400]


 Other amino acid metabolism

 Cofactor and vitamin biosynthesis
M00118 Glutathione biosynthesis, glutamate => glutathione [PATH: bup00480]


 Polyamine biosynthesis

 Phenylpropanoid and flavonoid biosynthesis

 Alkaloid and other secondary metabolite biosynthesis
Secondary metabolism

 Aromatics degradataion

Energy metabolism

 Photosynthesis

 ATP synthesis
M00144 NADH:quinone oxidoreductase, prokaryotes [PATH: bup00190]
M00417 Cytochrome o ubiquinol oxidase [PATH: bup00190]
M00157 F-type ATPase, bacteria [PATH: bup00190]

Carbohydrate and lipid metabolism

 Carbohydrate metabolism

 Glycan metabolism
Genetic information processing

 DNA polymerase

 Replication system

 Repair system

 RNA polymerase

 Spliceosome

 RNA processing

 Ribosome
M00178 Ribosome, bacteria [BR:ko03011][PATH: bup03010]


 Proteasome

 Ubiquitin system

 Protein processing
Environmental information processing

 Mineral and organic ion transport system

 Saccharide and polyol transport system

 Phosphate and amino acid transport system

 Peptide and nickel transport system

 Metallic cation, iron-siderophore and vitamin B12 transport system

 ABC-2 type and other transport systems
M00255 Lipoprotein-releasing system [BR:ko02000][PATH: bup02010]


 Phosphotransferase system (PTS)
M00265 PTS system, glucose-specific II component [BR:ko02000][PATH: bup00010 bup02060]
M00274 PTS system, mannitol-specific II component [BR:ko02000][PATH: bup00051 bup02060]


 Bacterial secretion system

Metabolism

 Aminoacyl tRNA

 Nucleotide sugar
Environmental information processing

 Two-component regulatory system

Genotypic signature

 Metabolic capacity

 Pathogenicity