KEGG   Methylomonas methanica

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KEGG Modules

Pathway module
    Energy metabolism
       Carbon fixation
       Nitrogen metabolism
        M00175 Nitrogen fixation, nitrogen => ammonia [PATH: mmt00910]
        M00531 Assimilatory nitrate reduction, nitrate => ammonia [PATH: mmt00910]
       Methane metabolism
        M00174 Methane oxidation, methylotroph, methane => CO2 [PATH: mmt00680]
       Sulfur metabolism
    Carbohydrate and lipid metabolism
       Central carbohydrate metabolism
        M00002 Glycolysis, core module involving three-carbon compounds [PATH: mmt00010]
        M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: mmt00010 mmt00020 mmt00620]
        M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: mmt00020]
        M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: mmt00020]
        M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: mmt00020]
        M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: mmt00030]
        M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: mmt00030]
        M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: mmt00030]
        M00580 Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH: mmt00030]
        M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: mmt00030 mmt00230]
        M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: mmt00030]
       Other carbohydrate metabolism
       Fatty acid metabolism
       Lipid metabolism
        M00093 Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH: mmt00564]
       Lipopolysaccharide metabolism
       Sugar metabolism
        M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH: mmt00520]
        M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH: mmt00500]
       Glycan metabolism
       Glycosaminoglycan metabolism
       Terpenoid backbone biosynthesis
       Sterol biosynthesis
       Other terpenoid biosynthesis
    Nucleotide and amino acid metabolism
       Purine metabolism
        M00048 Inosine monophosphate biosynthesis, PRPP + glutamine => IMP [PATH: mmt00230]
        M00049 Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH: mmt00230]
        M00050 Guanine ribonucleotide biosynthesis IMP => GDP,GTP [PATH: mmt00230]
       Pyrimidine metabolism
        M00052 Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH: mmt00240]
       Serine and threonine metabolism
        M00020 Serine biosynthesis, glycerate-3P => serine [PATH: mmt00260]
       Cysteine and methionine metabolism
       Branched-chain amino acid metabolism
        M00019 Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH: mmt00290]
        M00535 Isoleucine biosynthesis, pyruvate => 2-oxobutanoate [PATH: mmt00290]
        M00570 Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH: mmt00290]
        M00432 Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH: mmt00290]
       Lysine metabolism
        M00016 Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH: mmt00300]
       Arginine and proline metabolism
        M00015 Proline biosynthesis, glutamate => proline [PATH: mmt00330]
        M00028 Ornithine biosynthesis, glutamate => ornithine [PATH: mmt00330]
       Histidine metabolism
       Aromatic amino acid metabolism
        M00022 Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH: mmt00400]
        M00023 Tryptophan biosynthesis, chorismate => tryptophan [PATH: mmt00400]
       Other amino acid metabolism
       Cofactor and vitamin biosynthesis
        M00115 NAD biosynthesis, aspartate => NAD [PATH: mmt00760]
        M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: mmt00770]
        M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: mmt00770]
        M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: mmt00780]
        M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: mmt00790 mmt00670]
        M00121 Heme biosynthesis, glutamate => protoheme/siroheme [PATH: mmt00860]
        M00117 Ubiquinone biosynthesis, prokaryotes, chorismate => ubiquinone [PATH: mmt00130]
        M00118 Glutathione biosynthesis, glutamate => glutathione [PATH: mmt00480]
       Polyamine biosynthesis
       Phenylpropanoid and flavonoid biosynthesis
       Alkaloid and other secondary metabolite biosynthesis
    Secondary metabolism
       Aromatics degradataion
Structural complex
    Energy metabolism Carbohydrate and lipid metabolism
       Carbohydrate metabolism
       Glycan metabolism
    Genetic information processing
       DNA polymerase
       Replication system
       Repair system
       RNA polymerase
        M00183 RNA polymerase, bacteria [BR:ko03021 ko03400][PATH: mmt03020]
       Spliceosome
       RNA processing
       Ribosome
       Proteasome
       Ubiquitin system
       Protein processing
    Environmental information processing
       Mineral and organic ion transport system
        M00189 Molybdate transport system [BR:ko02000][PATH: mmt02010]
        M00438 Nitrate/nitrite transport system [BR:ko02000][PATH: mmt02010]
        M00188 NitT/TauT family transport system [BR:ko02000]
       Saccharide and polyol transport system
        M00207 Putative multiple sugar transport system [BR:ko02000]
        M00210 Putative ABC transport system [BR:ko02000]
        M00211 Putative ABC transport system [BR:ko02000]
       Phosphate and amino acid transport system
       Peptide and nickel transport system
        M00239 Peptides/nickel transport system [BR:ko02000][PATH: mmt02010]
       Metallic cation, iron-siderophore and vitamin B12 transport system
       ABC-2 type and other transport systems
        M00320 Lipopolysaccharide export system [BR:ko02000][PATH: mmt02010]
        M00255 Lipoprotein-releasing system [BR:ko02000][PATH: mmt02010]
        M00259 Heme transport system [BR:ko02000][PATH: mmt02010]
        M00256 Cell division transport system [BR:ko02000][PATH: mmt02010]
        M00248 Putative antibiotic transport system [BR:ko02000][PATH: mmt02010]
        M00258 Putative ABC transport system [BR:ko02000]
        M00254 ABC-2 type transport system [BR:ko02000]
       Phosphotransferase system (PTS)
       Bacterial secretion system
Functional set
    Metabolism
       Aminoacyl tRNA
       Nucleotide sugar
    Environmental information processing
       Two-component regulatory system
        M00434 PhoR-PhoB (phosphate starvation response) two-component regulatory system [BR:ko02022][PATH: mmt02020]
        M00449 CreC-CreB (phosphate regulation) two-component regulatory system [BR:ko02022][PATH: mmt02020]
        M00450 BaeS-BaeR (envelope stress response) two-component regulatory system [BR:ko02022][PATH: mmt02020]
        M00497 GlnL-GlnG (nitrogen regulation) two-component regulatory system [BR:ko02022][PATH: mmt02020]
        M00501 PilS-PilR (type 4 fimbriae synthesis) two-component regulatory system [BR:ko02022][PATH: mmt02020]
        M00515 FlrB-FlrC (polar flagellar synthesis) two-component regulatory system [BR:ko02022][PATH: mmt02020]
        M00523 RegB-RegA (redox response) two-component regulatory system [BR:ko02022][PATH: mmt02020]
Signature module
    Genotypic signature
       Pathogenicity

KEGG2 PATHWAY BRITE GENES GENOME LIGAND DISEASE DRUG