KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: senv00010 senv01200 senv01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: senv00010 senv01200 senv01230 senv01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: senv00010 senv00020 senv01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: senv00010 senv00020 senv00620 senv00785 senv01200 senv01210 senv01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: senv00020 senv01200 senv01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: senv00020 senv01200 senv01210 senv01230 senv01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: senv00020 senv01200 senv01210 senv01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: senv00030 senv01200 senv01100 senv01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: senv00030 senv01200 senv01100 senv01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: senv00030 senv01200 senv01230 senv01100 senv01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: senv00030 senv00230 senv01200 senv01230 senv01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: senv00030 senv01200 senv01100 senv01120]
Other carbohydrate metabolism
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:senv00040 senv00030 senv01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:senv00052 senv01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:senv00052 senv01100]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:senv00053 senv01100 senv01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:senv00500 senv01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:senv00500 senv01100]
M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:senv00500 senv01100 senv01110]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:senv00520 senv01250 senv01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:senv00520 senv00052 senv01250 senv01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:senv00520 senv01250 senv01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:senv00520 senv01100]
M00012 Glyoxylate cycle [PATH:senv00630 senv01200 senv01100 senv01110]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: senv00730 senv01240 senv01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: senv00730 senv01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: senv00740 senv01240 senv01100 senv01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: senv00750 senv01240 senv01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: senv00760 senv01240 senv01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: senv00770 senv01240 senv01100 senv01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: senv00770 senv01240 senv01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: senv00780 senv01240 senv01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: senv00780 senv01240 senv01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: senv00785 senv01240 senv01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: senv00790 senv00670 senv01240 senv01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: senv00790 senv01240 senv01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: senv00860 senv01240 senv01100 senv01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: senv00860 senv01240 senv01100 senv01110]
M00924 Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH: senv00860 senv01240 senv01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: senv00860 senv01240 senv01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: senv00130 senv01240 senv01100 senv01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: senv00130 senv01240 senv01100 senv01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00744 Cationic antimicrobial peptide (CAMP) resistance, protease PgtE
M00696 Multidrug resistance, efflux pump AcrEF-TolC
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00616 Sulfate-sulfur assimilation
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