KEGG Pangenomes

	KEGG Pangenomes
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Eukaryotes

Category			Species
Plants	Monocots	Grass family	Oryza sativa	2
Fungi	Basidiomycetes		Cryptococcus neoformans	2
Protists	Alveolates	Apicomplexans	Plasmodium falciparum	3

Prokaryotes

Category			Species
Bacteria	Gammaproteobacteria	Escherichia	Escherichia coli	59
		Salmonella	Salmonella enterica	29
		Yersinia	Yersinia pestis	12
			Yersinia pseudotuberculosis	4
			Yersinia enterocolitica	3
		Shigella	Shigella flexneri	4
			Shigella sonnei	2
			Shigella boydii	2
		Pectobacterium	Pectobacterium carotovorum	2
		Erwinia	Erwinia pyrifoliae	2
		Erwinia	Erwinia amylovora	2
		Buchnera	Buchnera aphidicola	13
		Wigglesworthia	Wigglesworthia glossinidia	2
		Enterobacter	Enterobacter cloacae	6
		Enterobacter	Enterobacter aerogenes	2
		Cronobacter	Cronobacter sakazakii	3
		Klebsiella	Klebsiella pneumoniae	6
		Klebsiella	Klebsiella oxytoca	2
		Serratia	Serratia marcescens	2
		Edwardsiella	Edwardsiella tarda	3
		Dickeya	Dickeya dadantii	3
		Pantoea	Pantoea ananatis	4
		Rahnella	Rahnella aquatilis	2
		Moranella	Moranella endobia	2
		Other Enterobacteria	Secondary endosymbiont	2
		Haemophilus	Haemophilus influenzae	9
		Histophilus	Haemophilus somnus	2
		Pasteurella	Pasteurella multocida	4
		Mannheimia	Mannheimia haemolytica	3
		Actinobacillus	Actinobacillus pleuropneumoniae	3
		Aggregatibacter	Aggregatibacter actinomycetemcomitans	3
		Xylella	Xylella fastidiosa	5
		Xanthomonas	Xanthomonas campestris	5
			Xanthomonas axonopodis	3
			Xanthomonas oryzae	4
		Stenotrophomonas	Stenotrophomonas maltophilia	4
		Vibrio	Vibrio cholerae	8
			Vibrio vulnificus	3
			Vibrio parahaemolyticus	2
		Aliivibrio	Vibrio fischeri	2
		Pseudomonas	Pseudomonas aeruginosa	8
			Pseudomonas putida	10
			Pseudomonas syringae	3
			Pseudomonas fluorescens	4
			Pseudomonas mendocina	2
			Pseudomonas stutzeri	6
		Azotobacter	Azotobacter vinelandii	3
		Acinetobacter	Acinetobacter baumannii	12
		Shewanella	Shewanella baltica	7
		Shewanella	Shewanella putrefaciens	2
		Alteromonas	Alteromonas macleodii	6
		Coxiella	Coxiella burnetii	5
		Legionella	Legionella pneumophila	9
		Francisella	Francisella tularensis	12
		Francisella	Francisella cf.	2
		Portiera	Portiera aleyrodidarum	5
		Acidithiobacillus	Acidithiobacillus ferrooxidans	2
		Carsonella	Carsonella ruddii	6
	Betaproteobacteria	Neisseria	Neisseria meningitidis	14
		Neisseria	Neisseria gonorrhoeae	3
		Ralstonia	Ralstonia solanacearum	4
		Ralstonia	Ralstonia pickettii	2
		Cupriavidus	Ralstonia eutropha	2
		Burkholderia	Burkholderia mallei	4
Burkholderia pseudomallei			7
Burkholderia thailandensis			2
Burkholderia cenocepacia			4
Burkholderia ambifaria			2
Burkholderia multivorans			2
Bordetella		Bordetella pertussis	3
		Bordetella parapertussis	2
		Bordetella bronchiseptica	3
Taylorella		Taylorella equigenitalis	3
Taylorella		Taylorella asinigenitalis	2
Acidovorax		Acidovorax avenae	2
Variovorax		Variovorax paradoxus	2
Alicycliphilus		Alicycliphilus denitrificans	2
Tremblaya		Tremblaya princeps	2
Kinetoplastibacterium		Kinetoplastibacterium crithidii	2
Kinetoplastibacterium		Kinetoplastibacterium blastocrithidii	2
Epsilonproteobacteria	Helicobacter	Helicobacter pylori	49
		Helicobacter cetorum	2
		Helicobacter cinaedi	2
	Campylobacter	Campylobacter jejuni	11
	Arcobacter	Arcobacter butzleri	2
Deltaproteobacteria	Geobacter	Geobacter sulfurreducens	2
	Desulfovibrio	Desulfovibrio vulgaris	4
	Desulfovibrio	Desulfovibrio desulfuricans	3
	Lawsonia	Lawsonia intracellularis	2
	Bdellovibrio	Bdellovibrio bacteriovorus	2
	Anaeromyxobacter	Anaeromyxobacter dehalogenans	2
Alphaproteobacteria	Rickettsia	Rickettsia prowazekii	10
		Rickettsia typhi	3
		Rickettsia canadensis	2
		Rickettsia bellii	2
		Rickettsia rickettsii	8
		Rickettsia massiliae	2
		Rickettsia slovaca	2
	Orientia	Orientia tsutsugamushi	2
	Wolbachia	Wolbachia endosymbiont	2
	Anaplasma	Anaplasma marginale	2
	Ehrlichia	Ehrlichia ruminantium	3
	Sinorhizobium	Sinorhizobium meliloti	7
	Sinorhizobium	Sinorhizobium fredii	3
	Rhizobium	Rhizobium etli	2
	Rhizobium	Rhizobium leguminosarum	3
	Liberibacter	Liberibacter asiaticus	2
	Brucella	Brucella melitensis	6
		Brucella abortus	3
		Brucella suis	4
		Brucella canis	2
	Bradyrhizobium	Bradyrhizobium japonicum	2
	Rhodopseudomonas	Rhodopseudomonas palustris	7
	Oligotropha	Oligotropha carboxidovorans	3
	Bartonella	Bartonella quintana	2
	Methylobacterium	Methylobacterium extorquens	4
	Hyphomicrobium	Hyphomicrobium denitrificans	2
	Caulobacter	Caulobacter crescentus	2
	Rhodobacter	Rhodobacter sphaeroides	4
	Phaeobacter	Phaeobacter gallaeciensis	2
	Zymomonas	Zymomonas mobilis	5
	Gluconobacter	Gluconobacter oxydans	2
	Gluconacetobacter	Gluconacetobacter diazotrophicus	2
	Acetobacter	Acetobacter pasteurianus	8
	Rhodospirillum	Rhodospirillum rubrum	2
	Unclassified Alphaproteobacteria	Micavibrio aeruginosavorus	2
	Unclassified Alphaproteobacteria	Alpha proteobacterium	2
Firmicutes	Bacillus	Bacillus subtilis	12
		Bacillus licheniformis	2
		Bacillus amyloliquefaciens	11
		Bacillus anthracis	6
		Bacillus cereus	13
		Bacillus thuringiensis	11
		Bacillus megaterium	3
		Bacillus coagulans	2
	Staphylococcus	Staphylococcus aureus	33
		Staphylococcus epidermidis	2
		Staphylococcus lugdunensis	2
		Staphylococcus pseudintermedius	2
	Listeria	Listeria monocytogenes	27
	Paenibacillus	Paenibacillus polymyxa	3
	Paenibacillus	Paenibacillus mucilaginosus	3
	Alicyclobacillus	Alicyclobacillus acidocaldarius	2
	Lactococcus	Lactococcus lactis	9
	Lactococcus	Lactococcus garvieae	2
	Streptococcus	Streptococcus pyogenes	18
		Streptococcus pneumoniae	24
		Streptococcus agalactiae	6
		Streptococcus mutans	4
		Streptococcus thermophilus	6
		Streptococcus suis	15
		Streptococcus equi	4
		Streptococcus dysgalactiae	4
		Streptococcus gallolyticus	3
		Streptococcus parasanguinis	2
		Streptococcus salivarius	3
	Lactobacillus	Lactobacillus plantarum	4
		Lactobacillus johnsonii	3
		Lactobacillus acidophilus	3
		Lactobacillus salivarius	2
		Lactobacillus delbrueckii	4
		Lactobacillus brevis	2
		Lactobacillus casei	6
		Lactobacillus reuteri	3
		Lactobacillus helveticus	3
		Lactobacillus fermentum	2
		Lactobacillus rhamnosus	4
		Lactobacillus amylovorus	2
		Lactobacillus buchneri	2
	Enterococcus	Enterococcus faecalis	5
	Enterococcus	Enterococcus faecium	3
	Melissococcus	Melissococcus plutonius	2
	Leuconostoc	Leuconostoc mesenteroides	2
	Clostridium	Clostridium acetobutylicum	3
		Clostridium perfringens	3
		Clostridium thermocellum	2
		Clostridium botulinum	13
		Clostridium kluyveri	2
		Clostridium stercorarium	2
		Clostridium difficile	4
	Desulfitobacterium	Desulfitobacterium hafniense	2
	Eubacterium	Eubacterium rectale	3
	Eubacterium	Eubacterium siraeum	2
	Roseburia	Roseburia intestinalis	2
	Faecalibacterium	Faecalibacterium prausnitzii	2
	Sulfobacillus	Sulfobacillus acidophilus	2
	Unclassified Clostridiales	Butyrate-producing bacterium	3
	Thermoanaerobacterium	Thermoanaerobacterium thermosaccharolyticum	2
Tenericutes	Mycoplasma	Mycoplasma genitalium	5
		Mycoplasma pneumoniae	4
		Mycoplasma gallisepticum	11
		Mycoplasma mycoides	3
		Mycoplasma hyopneumoniae	4
		Mycoplasma agalactiae	2
		Mycoplasma hyorhinis	4
		Mycoplasma fermentans	3
		Mycoplasma bovis	3
		Mycoplasma leachii	2
		Mycoplasma haemofelis	2
		Mycoplasma suis	2
		Mycoplasma putrefaciens	2
	Ureaplasma	Ureaplasma parvum	2
Actinobacteria	Mycobacterium	Mycobacterium tuberculosis	20
		Mycobacterium bovis	5
		Mycobacterium canettii	5
		Mycobacterium leprae	2
		Mycobacterium avium	3
		Mycobacterium intracellulare	3
		Mycobacterium smegmatis	3
		Mycobacterium gilvum	2
	Corynebacterium	Corynebacterium glutamicum	4
		Corynebacterium diphtheriae	13
		Corynebacterium urealyticum	2
		Corynebacterium pseudotuberculosis	15
		Corynebacterium ulcerans	3
	Streptomyces	Streptomyces cattleya	2
	Streptomyces	Streptomyces hygroscopicus	2
	Tropheryma	Tropheryma whipplei	2
	Clavibacter	Clavibacter michiganensis	3
	Propionibacterium	Propionibacterium acnes	10
	Amycolatopsis	Amycolatopsis mediterranei	3
	Bifidobacterium	Bifidobacterium longum	10
		Bifidobacterium animalis	10
		Bifidobacterium bifidum	3
		Bifidobacterium breve	2
	Gardnerella	Gardnerella vaginalis	3
Chlamydiae	Chlamydia	Chlamydia trachomatis	57
		Chlamydia pneumoniae	5
		Chlamydia psittaci	17
Spirochaetes	Borrelia	Borrelia burgdorferi	4
		Borrelia garinii	3
		Borrelia afzelii	3
	Treponema	Treponema pallidum	9
	Spirochaeta	Spirochaeta thermophila	2
	Leptospira	Leptospira interrogans	3
		Leptospira borgpetersenii	2
		Leptospira biflexa	2
	Brachyspira	Brachyspira pilosicoli	4
Bacteroidetes	Bacteroides	Bacteroides fragilis	3
	Porphyromonas	Porphyromonas gingivalis	3
	Salinibacter	Salinibacter ruber	2
	Rhodothermus	Rhodothermus marinus	2
	Riemerella	Riemerella anatipestifer	5
	Sulcia	Sulcia muelleri	4
Fibrobacteres	Fibrobacter	Fibrobacter succinogenes	2
Cyanobacteria	Synechococcus	Synechococcus elongatus	2
Cyanobacteria	Prochlorococcus	Prochlorococcus marinus	12
Green sulfur bacteria	Chlorobium	Chlorobium phaeobacteroides	2
Green nonsulfur bacteria	Dehalococcoides	Dehalococcoides mccartyi	2
Deinococcus-Thermus	Thermus	Thermus thermophilus	4
Deinococcus-Thermus	Meiothermus	Meiothermus ruber	2
Hyperthermophilic bacteria	Hydrogenobacter	Hydrogenobacter thermophilus	2
Hyperthermophilic bacteria	Thermotoga	Thermotoga maritima	2
Archaea	Euryarchaeota	Methanococcus	Methanococcus maripaludis	5
		Methanosarcina	Methanosarcina mazei	2
		Haloquadratum	Haloquadratum walsbyi	2
		Pyrococcus	Pyrococcus furiosus	2
	Crenarchaeota	Sulfolobus	Sulfolobus solfataricus	2
			Sulfolobus acidocaldarius	3
			Sulfolobus islandicus	10

Last updated: May 20, 2013

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