Search&Color Pathway is an advanced version of the KEGG pathway mapping tool, where given objects (genes, proteins, compounds, glycans, reactions, drugs, etc.) are searched against KEGG pathway maps and found objects are marked in any background and foreground colors (bgcolor and fgcolor).
The objects in different types of pathway maps are specified by the following KEGG identifiers and aliases.
| Prefix |
Type |
KEGG identifier |
Alias |
| map |
Reference pathway - metabolic |
K/R/EC numbers, C/G/D numbers |
KO alias |
| map |
Reference pathway - non-metabolic |
K number, C/G/D numbers |
KO alias |
| ko |
Reference pathway (KO) |
K number, C/G/D numbers |
KO alias |
| ec |
Reference pathway (EC) |
EC number, C/G/D numbers |
|
| rn |
Reference pathway (Reaction) |
R number, C/G/D numbers |
RP/RC numbers |
| org |
Organism-specific pathway |
gene identifier, C/G/D numbers |
gene alias (gene name),
K/EC numbers |
For organism-specific pathways, the identifiers of selected outside databases (NCBI-GeneID, NCBI-gi, and UniProt) may also be used.
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Last updated: September 20, 2011
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