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KEGG Mapper – Search&Color Pathway



Search against:    Enter: map, ko, ec, rn, hsadd, or

Primary ID:   (Outside IDs for organism-specific pathways only)

Enter objects one per line followed by bgcolor, fgcolor:
Examples:

(Reference pathway (KO))
K01803 red,blue
C00118 pink

(Homo sapiens pathway)
7167 red,blue
C00118 pink
Alternatively, enter the file name containing the data:
If necessary, change default bgcolor:

Include aliases

Use uncolored diagrams

Display objects not found in the search

Search pathways containing all the objects (AND search)




Search&Color Pathway is an advanced version of the KEGG pathway mapping tool, where given objects (genes, proteins, compounds, glycans, reactions, drugs, etc.) are searched against KEGG pathway maps and found objects are marked in any background and foreground colors (bgcolor and fgcolor). The objects in different types of pathway maps are specified by the following KEGG identifiers and aliases.

Prefix Type KEGG identifier Alias
map Reference pathway - metabolic K/R/EC numbers, C/G/D numbers KO alias
map Reference pathway - non-metabolic K number
C/G/D numbers
KO alias
ko Reference pathway (KO) K number
C/G/D numbers
KO alias
EC numbers
ec Reference pathway (EC) EC number
C/G/D numbers
rn Reference pathway (Reaction) R number
C/G/D numbers
RP/RC numbers
org Organism-specific pathway gene identifier
C/G/D numbers
NCBI-GeneID†
NCBI-gi†
UniProt ID†
gene alias (gene name)
K/EC numbers

† For organism-specific pathways, the NCBI and UniProt identifiers may also be used.


Last updated: January 1, 2014