Select KEGG pathway map: Examples:
(Color specification) Cancer stage
   hsa05200 + CML-stage
   hsa05220 + CML-stage
(Numerical values) Somatic mutations
   hsa05200 + CML-COSMIC
Enter file name containing the data:

File type: Color specification
Numerical value ( Convert to log scale)
     Gradation: minimum-maximum   negative-zero-positive
            Minimum : Maixmum :  

Use uncolored diagram




Color Pathway is an extension of the Search&Color Pathway tool, allowing multiple coloring of a selected pathway map. Multiple coloring of bgcolor (or bgcolor,fgcolor), which is specified in tab-delimited columns, may represent time-dependent or site-dependent changes of gene expressions, pathways active in different cancer stages, etc., and is shown as multiple snapshots of image maps. Alternatively, numerical values may be given in multiple columns and they are displayed by gradation and optionally 3D representation as well. The objects in different types of pathway maps are specified by the following KEGG identifiers.

Prefix Type KEGG identifier
map Reference pathway K number
ko Reference pathway (KO) K number
<org> Organism-specific pathway gene identifier


Last updated: July 24, 2014