Category specific clusters

Eukaryotes (231829)
Animals (66352)
Vertebrates (15766)
Mammals (4523)
Birds (563)
Reptiles (477)
Amphibians (358)
Fishes (2305)
Arthropods (15915)
Insects (12423)
Nematodes (8461)
Mollusks (2761)
Cnidarians (3603)
Plants (47994)
Eudicots (19822)
Mustard family (2812)
Rue family (394)
Mallow family (400)
Pea family (6089)
Rose family (1399)
Cucumber family (158)
Spurge family (160)
Nightshade family (714)
Monocots (5934)
Grass family (5278)
Palm family (233)
Green algae (8276)
Red algae (1282)
Fungi (44670)
Ascomycetes (22523)
Saccharomycetes (3484)
Sordariomycetes (4787)
Leotiomycetes (1226)
Eurotiomycetes (3276)
Dothideomycetes (3328)
Basidiomycetes (17110)
Microsporidians (1340)
Protists (58962)
Choanoflagellates (1433)
Amoebozoa (8100)
Dictyostelium (3561)
Entamoeba (3130)
Alveolates (17906)
Apicomplexans (7171)
Ciliates (6516)
Stramenopiles (9195)
Diatoms (2101)
Oomycetes (5587)
Euglenozoa (6529)
Bacteria (430460)
Proteobacteria (159586)
Gammaproteobacteria (56538)
Escherichia (1479)
Salmonella (1544)
Shigella (324)
Enterobacter (254)
Cronobacter (263)
Klebsiella (1146)
Citrobacter (37)
Blochmannia (45)
Moranella (10)
Raoultella (7)
Cedecea (11)
Kosakonia (21)
Yersinia (1354)
Serratia (344)
Rahnella (116)
Pectobacterium (234)
Sodalis (41)
Dickeya (55)
Erwinia (466)
Buchnera (117)
Wigglesworthia (58)
Pantoea (203)
Photorhabdus (111)
Proteus (89)
Xenorhabdus (762)
Providencia (177)
Edwardsiella (336)
Haemophilus (290)
Histophilus (23)
Pasteurella (87)
Mannheimia (370)
Actinobacillus (65)
Aggregatibacter (292)
Bibersteinia (140)
Xylella (571)
Xanthomonas (1449)
Stenotrophomonas (218)
Pseudoxanthomonas (24)
Lysobacter (829)
Dyella (93)
Vibrio (2232)
Aliivibrio (124)
Photobacterium (72)
Pseudomonas (3757)
Azotobacter (578)
Psychrobacter (221)
Acinetobacter (1641)
Moraxella (210)
Shewanella (804)
Idiomarina (221)
Colwellia (145)
Pseudoalteromonas (514)
Marinobacter (400)
Alteromonas (909)
Glaciecola (3)
Psychromonas (53)
Cellvibrio (85)
Microbulbifer (113)
Coxiella (590)
Legionella (982)
Methylomonas (208)
Francisella (862)
Thioalkalimicrobium (149)
Methylophaga (98)
Cycloclasticus (143)
Nitrosococcus (146)
Halorhodospira (12)
Thioalkalivibrio (257)
Spiribacter (112)
Halothiobacillus (234)
Halomonas (647)
Portiera (109)
Carsonella (145)
Alcanivorax (218)
Kangiella (178)
Marinomonas (199)
Thalassolituus (243)
Aeromonas (469)
Betaproteobacteria (18449)
Neisseria (686)
Chromobacterium (146)
Ralstonia (505)
Cupriavidus (125)
Burkholderia (5027)
Paraburkholderia (443)
Polynucleobacter (12)
Pandoraea (428)
Bordetella (633)
Achromobacter (313)
Taylorella (178)
Advenella (89)
Rhodoferax (46)
Polaromonas (39)
Acidovorax (149)
Delftia (210)
Variovorax (181)
Comamonas (76)
Alicycliphilus (43)
Limnohabitans (37)
Hydrogenophaga (57)
Janthinobacterium (69)
Herbaspirillum (159)
Collimonas (124)
Massilia (37)
Thiomonas (161)
Rubrivivax (102)
Nitrosomonas (231)
Azoarcus (74)
Thauera (43)
Methylotenera (8)
Methylovorus (76)
Methylopumilus (8)
Tremblaya (91)
Kinetoplastibacterium (81)
Epsilonproteobacteria (5344)
Helicobacter (1755)
Sulfurimonas (37)
Sulfuricurvum (115)
Campylobacter (1157)
Arcobacter (297)
Sulfurospirillum (187)
Sulfurovum (83)
Deltaproteobacteria (16082)
Geobacter (686)
Pelobacter (144)
Desulfuromonas (63)
Desulfovibrio (1387)
Lawsonia (140)
Desulfomicrobium (91)
Bdellovibrio (1363)
Desulfococcus (43)
Anaeromyxobacter (578)
Myxococcus (277)
Sorangium (431)
Alphaproteobacteria (34331)
Rickettsia (1485)
Orientia (191)
Wolbachia (261)
Anaplasma (495)
Ehrlichia (317)
Neorickettsia (262)
Mesorhizobium (424)
Sinorhizobium (724)
Ensifer (19)
Agrobacterium (121)
Rhizobium (837)
Neorhizobium (119)
Liberibacter (313)
Brucella (1148)
Ochrobactrum (92)
Bradyrhizobium (1171)
Rhodopseudomonas (228)
Nitrobacter (56)
Oligotropha (166)
Bosea (173)
Bartonella (348)
Methylobacterium (1699)
Chelatococcus (75)
Hyphomicrobium (334)
Filomicrobium (652)
Martelella (67)
Hodgkinia (142)
Caulobacter (318)
Brevundimonas (193)
Ruegeria (73)
Rhodobacter (254)
Roseobacter (62)
Paracoccus (60)
Ketogulonicigenium (207)
Phaeobacter (91)
Octadecabacter (113)
Celeribacter (24)
Labrenzia (237)
Zymomonas (157)
Novosphingobium (106)
Sphingopyxis (225)
Sphingomonas (118)
Sphingobium (288)
Erythrobacter (38)
Altererythrobacter (26)
Porphyrobacter (11)
Gluconobacter (93)
Granulobacter (394)
Acidiphilium (191)
Gluconacetobacter (107)
Komagataeibacter (123)
Acetobacter (252)
Rhodospirillum (231)
Magnetospirillum (409)
Azospirillum (748)
Endolissoclinum (75)
Micavibrio (558)
Pelagibacter (24)
Other proteobacteria (666)
Firmicutes (64869)
Bacillus (6992)
Geobacillus (416)
Parageobacillus (11)
Anoxybacillus (269)
Lysinibacillus (181)
Virgibacillus (84)
Fictibacillus (159)
Staphylococcus (1899)
Listeria (1249)
Exiguobacterium (479)
Brevibacillus (180)
Paenibacillus (2590)
Alicyclobacillus (574)
Solibacillus (157)
Planococcus (184)
Lactococcus (819)
Streptococcus (3489)
Lactobacillus (3906)
Pediococcus (96)
Enterococcus (958)
Melissococcus (73)
Vagococcus (30)
Leuconostoc (343)
Weissella (253)
Aerococcus (241)
Carnobacterium (102)
Jeotgalibaca (36)
Clostridium (3843)
Alkaliphilus (69)
Arthromitus (297)
Ruminiclostridium (756)
Ruminococcus (309)
Faecalibacterium (181)
Butyrivibrio (218)
Roseburia (240)
Coprococcus (10)
Blautia (34)
Lachnoclostridium (124)
Clostridioides (342)
Desulfitobacterium (247)
Desulfotomaculum (391)
Desulfosporosinus (199)
Dehalobacter (303)
Eubacterium (79)
Sulfobacillus (1272)
Thermoanaerobacter (140)
Tepidanaerobacter (174)
Caldicellulosiruptor (501)
Thermoanaerobacterium (161)
Halanaerobium (97)
Selenomonas (158)
Pelosinus (335)
Acidaminococcus (148)
Erysipelothrix (337)
Tenericutes (5331)
Mycoplasma (2613)
Ureaplasma (147)
Phytoplasma (250)
Acholeplasma (303)
Mesoplasma (47)
Spiroplasma (1122)
Actinobacteria (48192)
Mycobacterium (4242)
Corynebacterium (3104)
Nocardia (628)
Rhodococcus (756)
Gordonia (207)
Streptomyces (5163)
Tropheryma (189)
Leifsonia (85)
Clavibacter (177)
Microbacterium (192)
Rhodoluna (75)
Rathayibacter (192)
Curtobacterium (100)
Arthrobacter (334)
Pseudarthrobacter (71)
Glutamicibacter (21)
Kocuria (46)
Rothia (143)
Brachybacterium (104)
Isoptericola (22)
Cellulomonas (77)
Cutibacterium (374)
Propionibacterium (142)
Acidipropionibacterium (167)
Tessaracoccus (128)
Nocardioides (103)
Nocardiopsis (171)
Frankia (564)
Amycolatopsis (773)
Pseudonocardia (678)
Actinoalloteichus (504)
Salinispora (79)
Micromonospora (179)
Actinoplanes (481)
Trueperella (86)
Actinomyces (162)
Bifidobacterium (1860)
Gardnerella (73)
Rubrobacter (528)
Eggerthella (53)
Olsenella (77)
Cyanobacteria (12987)
Synechocystis (203)
Synechococcus (1078)
Thermosynechococcus (59)
Leptolyngbya (106)
Prochlorococcus (1374)
Microcystis (284)
Cyanobacterium (15)
Geminocystis (40)
Cyanothece (547)
Oscillatoria (100)
Gloeobacter (519)
Nostoc (134)
Anabaena (119)
Calothrix (51)
Chloroflexi (3098)
Dehalococcoides (331)
Dehalogenimonas (187)
Roseiflexus (324)
Chloroflexus (361)
Deinococcus (1172)
Thermus (349)
Meiothermus (286)
Armatimonadetes (303)
Chlamydiae (2029)
Chlamydia (863)
Protochlamydia (220)
Verrucomicrobia (1756)
Akkermansia (428)
Planctomycetes (4071)
Pirellula (178)
Planctomyces (157)
Spirochaetes (7413)
Borreliella (226)
Borrelia (68)
Treponema (1172)
Spirochaeta (305)
Sphaerochaeta (351)
Leptospira (2246)
Brachyspira (981)
Acidobacteria (1671)
Granulicella (122)
Terriglobus (104)
Elusimicrobia (286)
Fusobacteria (1288)
Fusobacterium (373)
Leptotrichia (172)
Synergistetes (646)
Fibrobacteres (1094)
Gemmatimonadetes (841)
Gemmatimonas (192)
Bacteroidetes (20705)
Bacteroides (1362)
Porphyromonas (331)
Parabacteroides (34)
Tannerella (96)
Prevotella (365)
Alistipes (173)
Salinibacter (461)
Rhodothermus (297)
Niabella (125)
Pedobacter (210)
Sphingobacterium (149)
Cyclobacterium (148)
Spirosoma (193)
Hymenobacter (520)
Rufibacter (122)
Gramella (27)
Flavobacterium (406)
Capnocytophaga (150)
Riemerella (259)
Maribacter (25)
Cellulophaga (203)
Dokdonia (71)
Lacinutrix (24)
Muricauda (17)
Ornithobacterium (207)
Nonlabens (71)
Polaribacter (50)
Elizabethkingia (176)
Myroides (299)
Chryseobacterium (245)
Winogradskyella (31)
Tenacibaculum (24)
Lutibacter (20)
Formosa (34)
Sulcia (38)
Blattabacterium (75)
Chlorobi (976)
Chlorobaculum (30)
Chlorobium (45)
Pelodictyon (11)
Prosthecochloris (19)
Aquificae (1574)
Hydrogenobaculum (204)
Hydrogenobacter (165)
Thermocrinis (15)
Sulfurihydrogenibium (50)
Thermotogae (2176)
Thermotoga (203)
Pseudothermotoga (121)
Thermosipho (91)
Fervidobacterium (102)
Marinitoga (192)
Kosmotoga (91)
Deferribacteres (475)
Dictyoglomi (427)
Nitrospirae (1659)
Nitrospira (722)
Leptospirillum (873)
Thermodesulfobacteria (311)
Thermodesulfobacterium (26)
Saccharibacteria (325)
Archaea (39301)
Euryarchaeota (22634)
Methanocaldococcus (142)
Methanococcus (364)
Methanosarcina (2276)
Methanococcoides (45)
Methanohalophilus (60)
Methanosaeta (370)
Methanoculleus (313)
Methanoregula (156)
Methanocella (740)
Methanothermobacter (146)
Methanobrevibacter (599)
Methanobacterium (459)
Archaeoglobus (462)
Geoglobus (51)
Halobacterium (204)
Haloarcula (264)
Natronomonas (88)
Halorhabdus (117)
Halanaeroarchaeum (162)
Haloquadratum (181)
Haloferax (169)
Haloterrigena (32)
Natrinema (39)
Thermoplasma (96)
Pyrococcus (108)
Thermococcus (524)
Aciduliprofundum (402)
Crenarchaeota (7114)
Aeropyrum (253)
Staphylothermus (150)
Ignicoccus (379)
Desulfurococcus (56)
Sulfolobus (910)
Metallosphaera (43)
Pyrobaculum (470)
Thermoproteus (59)
Vulcanisaeta (308)
Thermofilum (496)
Thaumarchaeota (2577)
Nitrosopumilus (118)
Nitrososphaera (701)
Nanoarchaeota (51)
Bathyarchaeota (242)