Category specific clusters

Eukaryotes (233673)
Animals (65475)
Vertebrates (14939)
Mammals (4664)
Birds (567)
Reptiles (402)
Amphibians (175)
Fishes (1962)
Arthropods (15832)
Insects (12317)
Nematodes (8466)
Mollusks (2797)
Cnidarians (3654)
Plants (48204)
Eudicots (19808)
Mustard family (2877)
Rue family (406)
Mallow family (835)
Pea family (5926)
Rose family (1448)
Cucumber family (151)
Spurge family (181)
Nightshade family (855)
Monocots (6143)
Grass family (5427)
Palm family (246)
Green algae (8332)
Red algae (1289)
Fungi (45964)
Ascomycetes (23807)
Saccharomycetes (4762)
Sordariomycetes (4779)
Leotiomycetes (1218)
Eurotiomycetes (3277)
Dothideomycetes (3325)
Basidiomycetes (17111)
Microsporidians (1344)
Protists (60025)
Choanoflagellates (1454)
Amoebozoa (8126)
Dictyostelium (3582)
Entamoeba (3120)
Alveolates (18761)
Apicomplexans (7986)
Ciliates (6525)
Stramenopiles (9310)
Diatoms (2139)
Oomycetes (5640)
Euglenozoa (6515)
Bacteria (394999)
Proteobacteria (143519)
Gammaproteobacteria (50562)
Escherichia (1454)
Salmonella (1553)
Yersinia (1357)
Shigella (320)
Pectobacterium (198)
Erwinia (474)
Photorhabdus (117)
Buchnera (114)
Wigglesworthia (59)
Sodalis (39)
Enterobacter (238)
Cronobacter (264)
Klebsiella (1140)
Citrobacter (32)
Serratia (276)
Proteus (91)
Edwardsiella (346)
Blochmannia (43)
Dickeya (56)
Xenorhabdus (733)
Pantoea (198)
Rahnella (115)
Moranella (9)
Providencia (155)
Raoultella (6)
Cedecea (15)
Haemophilus (292)
Histophilus (25)
Pasteurella (89)
Mannheimia (378)
Actinobacillus (64)
Aggregatibacter (241)
Bibersteinia (146)
Xylella (567)
Xanthomonas (1311)
Stenotrophomonas (187)
Pseudoxanthomonas (24)
Lysobacter (421)
Dyella (97)
Vibrio (2087)
Aliivibrio (123)
Photobacterium (79)
Pseudomonas (3637)
Azotobacter (586)
Psychrobacter (229)
Acinetobacter (1426)
Moraxella (197)
Shewanella (811)
Idiomarina (183)
Colwellia (150)
Pseudoalteromonas (405)
Marinobacter (313)
Alteromonas (875)
Glaciecola (6)
Psychromonas (47)
Coxiella (590)
Legionella (982)
Methylomonas (204)
Francisella (1170)
Thioalkalimicrobium (109)
Methylophaga (81)
Cycloclasticus (116)
Nitrosococcus (151)
Halorhodospira (11)
Thioalkalivibrio (220)
Spiribacter (64)
Halomonas (167)
Portiera (88)
Carsonella (155)
Alcanivorax (172)
Kangiella (158)
Marinomonas (171)
Thalassolituus (185)
Aeromonas (429)
Betaproteobacteria (16755)
Neisseria (681)
Ralstonia (486)
Cupriavidus (129)
Burkholderia (5034)
Paraburkholderia (433)
Polynucleobacter (13)
Pandoraea (430)
Bordetella (521)
Achromobacter (256)
Taylorella (174)
Advenella (73)
Polaromonas (50)
Acidovorax (108)
Delftia (115)
Variovorax (197)
Comamonas (80)
Alicycliphilus (45)
Limnohabitans (41)
Janthinobacterium (29)
Herbaspirillum (86)
Collimonas (123)
Massilia (37)
Thiomonas (146)
Rubrivivax (105)
Nitrosomonas (239)
Azoarcus (74)
Thauera (25)
Methylotenera (9)
Methylovorus (79)
Methylopumilus (9)
Tremblaya (90)
Kinetoplastibacterium (74)
Epsilonproteobacteria (5071)
Helicobacter (1754)
Sulfurimonas (37)
Sulfuricurvum (119)
Campylobacter (1074)
Arcobacter (246)
Sulfurospirillum (127)
Sulfurovum (88)
Deltaproteobacteria (14911)
Geobacter (706)
Pelobacter (40)
Desulfuromonas (63)
Desulfovibrio (1371)
Lawsonia (145)
Desulfomicrobium (89)
Bdellovibrio (1332)
Anaeromyxobacter (577)
Myxococcus (295)
Sorangium (514)
Alphaproteobacteria (31673)
Rickettsia (1487)
Orientia (183)
Wolbachia (267)
Anaplasma (483)
Ehrlichia (314)
Neorickettsia (266)
Mesorhizobium (289)
Sinorhizobium (703)
Agrobacterium (112)
Rhizobium (795)
Neorhizobium (124)
Liberibacter (302)
Brucella (1146)
Ochrobactrum (95)
Bradyrhizobium (1144)
Rhodopseudomonas (228)
Nitrobacter (53)
Oligotropha (168)
Bartonella (360)
Methylobacterium (1723)
Hyphomicrobium (337)
Filomicrobium (642)
Martelella (68)
Hodgkinia (143)
Caulobacter (321)
Brevundimonas (194)
Ruegeria (76)
Rhodobacter (252)
Roseobacter (88)
Paracoccus (62)
Ketogulonicigenium (209)
Phaeobacter (63)
Octadecabacter (134)
Celeribacter (29)
Zymomonas (163)
Novosphingobium (94)
Sphingopyxis (158)
Sphingomonas (155)
Sphingobium (241)
Erythrobacter (9)
Altererythrobacter (11)
Gluconobacter (103)
Granulobacter (395)
Acidiphilium (191)
Gluconacetobacter (126)
Komagataeibacter (107)
Acetobacter (231)
Rhodospirillum (208)
Magnetospirillum (409)
Azospirillum (718)
Endolissoclinum (77)
Micavibrio (540)
Pelagibacter (24)
Other proteobacteria (635)
Firmicutes (61384)
Bacillus (7043)
Geobacillus (515)
Anoxybacillus (51)
Lysinibacillus (180)
Staphylococcus (1862)
Listeria (1244)
Exiguobacterium (417)
Brevibacillus (176)
Paenibacillus (2499)
Alicyclobacillus (566)
Planococcus (105)
Lactococcus (822)
Streptococcus (3519)
Lactobacillus (3769)
Pediococcus (91)
Enterococcus (989)
Melissococcus (74)
Leuconostoc (341)
Weissella (205)
Aerococcus (205)
Carnobacterium (134)
Clostridium (3895)
Alkaliphilus (68)
Arthromitus (292)
Ruminiclostridium (717)
Ruminococcus (327)
Faecalibacterium (191)
Butyrivibrio (52)
Roseburia (256)
Coprococcus (12)
Blautia (15)
Lachnoclostridium (39)
Clostridioides (371)
Desulfitobacterium (255)
Desulfotomaculum (389)
Desulfosporosinus (195)
Dehalobacter (300)
Eubacterium (96)
Sulfobacillus (1234)
Thermoanaerobacter (137)
Tepidanaerobacter (175)
Caldicellulosiruptor (495)
Thermoanaerobacterium (166)
Halanaerobium (94)
Selenomonas (152)
Pelosinus (331)
Acidaminococcus (154)
Erysipelothrix (372)
Tenericutes (5036)
Mycoplasma (2505)
Ureaplasma (143)
Phytoplasma (227)
Acholeplasma (312)
Mesoplasma (46)
Spiroplasma (971)
Actinobacteria (44231)
Mycobacterium (4276)
Corynebacterium (3078)
Nocardia (295)
Rhodococcus (767)
Gordonia (172)
Streptomyces (4972)
Tropheryma (188)
Leifsonia (89)
Clavibacter (184)
Microbacterium (170)
Rathayibacter (198)
Arthrobacter (323)
Pseudarthrobacter (78)
Glutamicibacter (25)
Kocuria (50)
Rothia (139)
Isoptericola (24)
Cellulomonas (75)
Propionibacterium (730)
Nocardiopsis (185)
Frankia (562)
Amycolatopsis (833)
Pseudonocardia (644)
Salinispora (78)
Micromonospora (178)
Actinoplanes (479)
Trueperella (88)
Actinomyces (147)
Bifidobacterium (1798)
Gardnerella (77)
Rubrobacter (513)
Eggerthella (52)
Olsenella (75)
Cyanobacteria (12813)
Synechocystis (204)
Synechococcus (1077)
Thermosynechococcus (62)
Leptolyngbya (106)
Prochlorococcus (1364)
Microcystis (289)
Cyanobacterium (15)
Geminocystis (40)
Cyanothece (553)
Oscillatoria (100)
Gloeobacter (518)
Nostoc (137)
Anabaena (118)
Calothrix (57)
Chloroflexi (2864)
Dehalococcoides (376)
Dehalogenimonas (129)
Roseiflexus (322)
Chloroflexus (359)
Deinococcus (1154)
Thermus (298)
Meiothermus (289)
Armatimonadetes (305)
Chlamydiae (1999)
Chlamydia (862)
Protochlamydia (217)
Verrucomicrobia (1286)
Spirochaetes (7317)
Borreliella (223)
Borrelia (61)
Treponema (1183)
Spirochaeta (383)
Sphaerochaeta (357)
Leptospira (2199)
Brachyspira (967)
Acidobacteria (1612)
Granulicella (127)
Terriglobus (97)
Fibrobacteres (1070)
Elusimicrobia (278)
Fusobacteria (1186)
Fusobacterium (381)
Leptotrichia (103)
Gemmatimonadetes (693)
Synergistetes (526)
Planctomycetes (3414)
Pirellula (178)
Planctomyces (178)
Bacteroidetes (17611)
Bacteroides (1259)
Porphyromonas (330)
Prevotella (391)
Alistipes (187)
Salinibacter (436)
Rhodothermus (292)
Pedobacter (144)
Sphingobacterium (62)
Cyclobacterium (160)
Spirosoma (164)
Hymenobacter (508)
Rufibacter (130)
Flavobacterium (268)
Capnocytophaga (161)
Riemerella (263)
Cellulophaga (236)
Dokdonia (75)
Muricauda (20)
Ornithobacterium (223)
Nonlabens (68)
Elizabethkingia (196)
Myroides (257)
Chryseobacterium (173)
Sulcia (34)
Blattabacterium (62)
Chlorobi (942)
Chlorobaculum (21)
Chlorobium (51)
Pelodictyon (14)
Aquificae (1531)
Hydrogenobaculum (203)
Hydrogenobacter (161)
Thermocrinis (14)
Sulfurihydrogenibium (49)
Thermotogae (1967)
Thermotoga (201)
Pseudothermotoga (122)
Thermosipho (74)
Fervidobacterium (103)
Kosmotoga (87)
Deferribacteres (467)
Dictyoglomi (424)
Nitrospirae (1654)
Nitrospira (725)
Leptospirillum (867)
Thermodesulfobacteria (293)
Thermodesulfobacterium (24)
Saccharibacteria (248)
Archaea (38067)
Euryarchaeota (21634)
Methanocaldococcus (144)
Methanococcus (371)
Methanosarcina (2133)
Methanococcoides (45)
Methanosaeta (370)
Methanoculleus (309)
Methanoregula (158)
Methanocella (750)
Methanothermobacter (127)
Methanobrevibacter (607)
Methanobacterium (413)
Archaeoglobus (451)
Geoglobus (45)
Halobacterium (210)
Haloarcula (278)
Natronomonas (87)
Halorhabdus (130)
Halanaeroarchaeum (195)
Haloquadratum (172)
Haloferax (171)
Natrinema (46)
Thermoplasma (138)
Pyrococcus (144)
Thermococcus (498)
Aciduliprofundum (405)
Crenarchaeota (7072)
Aeropyrum (259)
Staphylothermus (149)
Ignicoccus (378)
Desulfurococcus (56)
Sulfolobus (879)
Metallosphaera (45)
Pyrobaculum (467)
Thermoproteus (59)
Vulcanisaeta (304)
Thermofilum (489)
Thaumarchaeota (2589)
Nitrosopumilus (117)
Nitrososphaera (702)
Nanoarchaeota (55)
Bathyarchaeota (245)