Category specific clusters

Eukaryotes (172586)
Animals (46247)
Vertebrates (10622)
Mammals (4730)
Birds (303)
Reptiles (156)
Amphibians (160)
Fishes (963)
Arthropods (11830)
Insects (10587)
Nematodes (8481)
Cnidarians (2189)
Plants (36616)
Eudicots (10517)
Mustard family (1892)
Rue family (308)
Pea family (2668)
Nightshade family (316)
Monocots (5747)
Green algae (7737)
Red algae (1226)
Fungi (30397)
Ascomycetes (17868)
Saccharomycetes (4604)
Sordariomycetes (2309)
Leotiomycetes (1188)
Eurotiomycetes (2928)
Dothideomycetes (1310)
Basidiomycetes (8340)
Microsporidians (1352)
Protists (48702)
Amoebozoa (7741)
Dictyostelium (3565)
Entamoeba (2711)
Alveolates (14959)
Apicomplexans (8239)
Ciliates (6587)
Stramenopiles (4180)
Diatoms (2397)
Euglenozoa (6549)
Bacteria (317703)
Proteobacteria (114768)
Gammaproteobacteria (37235)
Escherichia (1572)
Salmonella (1525)
Yersinia (906)
Shigella (196)
Pectobacterium (179)
Erwinia (472)
Photorhabdus (104)
Buchnera (109)
Wigglesworthia (39)
Sodalis (47)
Enterobacter (176)
Cronobacter (220)
Klebsiella (540)
Citrobacter (12)
Serratia (253)
Proteus (78)
Edwardsiella (231)
Blochmannia (21)
Dickeya (61)
Xenorhabdus (99)
Pantoea (151)
Rahnella (127)
Moranella (4)
Other Enterobacteria (2)
Haemophilus (189)
Histophilus (28)
Pasteurella (75)
Mannheimia (307)
Actinobacillus (36)
Aggregatibacter (160)
Xylella (397)
Xanthomonas (1047)
Stenotrophomonas (209)
Pseudoxanthomonas (8)
Vibrio (1454)
Aliivibrio (114)
Listonella (110)
Pseudomonas (2657)
Azotobacter (598)
Psychrobacter (198)
Acinetobacter (1174)
Shewanella (944)
Idiomarina (191)
Pseudoalteromonas (160)
Marinobacter (178)
Alteromonas (739)
Glaciecola (67)
Psychromonas (55)
Coxiella (639)
Legionella (1124)
Francisella (865)
Methylophaga (91)
Cycloclasticus (149)
Nitrosococcus (168)
Thioalkalivibrio (115)
Spiribacter (84)
Portiera (86)
Alcanivorax (107)
Marinomonas (202)
Aeromonas (206)
Acidithiobacillus (465)
Carsonella (159)
Betaproteobacteria (12883)
Neisseria (752)
Ralstonia (527)
Cupriavidus (272)
Burkholderia (4447)
Polynucleobacter (8)
Pandoraea (322)
Bordetella (197)
Achromobacter (274)
Taylorella (190)
Polaromonas (69)
Acidovorax (148)
Delftia (187)
Variovorax (202)
Alicycliphilus (67)
Thiomonas (178)
Nitrosomonas (169)
Azoarcus (24)
Methylotenera (43)
Methylovorus (94)
Tremblaya (79)
Kinetoplastibacterium (75)
Unclassified Betaproteobacteria (11)
Epsilonproteobacteria (4419)
Helicobacter (1656)
Sulfurimonas (37)
Sulfuricurvum (122)
Campylobacter (687)
Arcobacter (258)
Sulfurospirillum (97)
Deltaproteobacteria (12930)
Geobacter (804)
Pelobacter (41)
Desulfovibrio (1195)
Lawsonia (149)
Bdellovibrio (1244)
Anaeromyxobacter (649)
Myxococcus (296)
Sorangium (1695)
Alphaproteobacteria (27716)
Rickettsia (1470)
Orientia (186)
Wolbachia (250)
Anaplasma (483)
Ehrlichia (161)
Neorickettsia (317)
Mesorhizobium (525)
Sinorhizobium (909)
Agrobacterium (115)
Rhizobium (532)
Liberibacter (361)
Brucella (926)
Bradyrhizobium (587)
Rhodopseudomonas (274)
Nitrobacter (65)
Oligotropha (184)
Bartonella (210)
Methylobacterium (1410)
Hyphomicrobium (486)
Caulobacter (516)
Ruegeria (23)
Rhodobacter (319)
Roseobacter (98)
Paracoccus (97)
Ketogulonicigenium (269)
Phaeobacter (88)
Octadecabacter (165)
Zymomonas (166)
Novosphingobium (76)
Sphingomonas (64)
Sphingobium (190)
Gluconobacter (114)
Acidiphilium (221)
Gluconacetobacter (193)
Acetobacter (242)
Rhodospirillum (365)
Magnetospirillum (258)
Azospirillum (443)
Micavibrio (591)
Unclassified Alphaproteobacteria (400)
Firmicutes (51529)
Bacillus (6041)
Geobacillus (499)
Staphylococcus (1542)
Listeria (1132)
Exiguobacterium (447)
Paenibacillus (1629)
Alicyclobacillus (584)
Lactococcus (763)
Streptococcus (3357)
Lactobacillus (3338)
Pediococcus (82)
Enterococcus (762)
Melissococcus (102)
Leuconostoc (380)
Carnobacterium (136)
Clostridium (4472)
Alkaliphilus (130)
Arthromitus (223)
Desulfitobacterium (254)
Desulfotomaculum (396)
Desulfosporosinus (219)
Dehalobacter (310)
Eubacterium (689)
Butyrivibrio (51)
Roseburia (263)
Coprococcus (16)
Ruminococcus (265)
Faecalibacterium (213)
Sulfobacillus (1272)
Unclassified Clostridiales (56)
Thermoanaerobacter (171)
Tepidanaerobacter (187)
Caldicellulosiruptor (505)
Thermoanaerobacterium (172)
Halanaerobium (104)
Selenomonas (136)
Acidaminococcus (177)
Erysipelothrix (414)
Tenericutes (3696)
Mycoplasma (2196)
Ureaplasma (154)
Phytoplasma (237)
Mesoplasma (46)
Spiroplasma (402)
Actinobacteria (33501)
Mycobacterium (3396)
Corynebacterium (2196)
Nocardia (231)
Rhodococcus (545)
Gordonia (162)
Streptomyces (3400)
Tropheryma (228)
Leifsonia (124)
Clavibacter (197)
Arthrobacter (423)
Rothia (158)
Cellulomonas (85)
Propionibacterium (633)
Nocardiopsis (191)
Frankia (617)
Amycolatopsis (654)
Salinispora (90)
Micromonospora (196)
Actinoplanes (539)
Bifidobacterium (1407)
Gardnerella (89)
Eggerthella (60)
Chlamydiae (1771)
Chlamydia (438)
Chlamydophila (1)
Verrucomicrobia (701)
Spirochaetes (6886)
Borrelia (580)
Treponema (864)
Spirochaeta (535)
Leptospira (2045)
Brachyspira (950)
Sphaerochaeta (250)
Acidobacteria (1693)
Granulicella (130)
Terriglobus (110)
Fibrobacteres (1084)
Elusimicrobia (64)
Fusobacteria (915)
Fusobacterium (227)
Synergistetes (527)
Planctomycetes (2233)
Planctomyces (289)
Cyanobacteria (9957)
Synechocystis (80)
Synechococcus (779)
Thermosynechococcus (63)
Cyanothece (592)
Cyanobacterium (57)
Gloeobacter (512)
Nostoc (349)
Calothrix (30)
Prochlorococcus (990)
Oscillatoria (114)
Bacteroidetes (12135)
Bacteroides (806)
Porphyromonas (326)
Prevotella (307)
Alistipes (211)
Salinibacter (494)
Rhodothermus (332)
Pedobacter (58)
Flavobacterium (140)
Capnocytophaga (62)
Riemerella (221)
Cellulophaga (48)
Sulcia (36)
Blattabacterium (60)
Chlorobi (1071)
Chlorobaculum (25)
Chlorobium (55)
Pelodictyon (14)
Chloroflexi (2801)
Dehalococcoides (353)
Roseiflexus (323)
Chloroflexus (379)
Deinococcus (954)
Thermus (265)
Meiothermus (324)
Aquificae (1637)
Hydrogenobaculum (212)
Hydrogenobacter (170)
Thermocrinis (11)
Sulfurihydrogenibium (63)
Thermotogae (1728)
Thermotoga (347)
Thermosipho (79)
Fervidobacterium (84)
Deferribacteres (508)
Dictyoglomi (449)
Nitrospirae (797)
Leptospirillum (662)
Thermodesulfobacteria (153)
Unclassified Bacteria (416)
Saccharibacteria (290)
Other (34)
Archaea (29716)
Euryarchaeota (17504)
Methanocaldococcus (132)
Methanococcus (316)
Methanosarcina (555)
Methanosaeta (390)
Methanoculleus (186)
Methanoregula (174)
Methanocella (759)
Methanothermobacter (111)
Methanobrevibacter (240)
Methanobacterium (230)
Archaeoglobus (284)
Halobacterium (194)
Haloarcula (254)
Haloquadratum (181)
Natronomonas (91)
Halorhabdus (147)
Haloferax (80)
Natrinema (58)
Thermoplasma (164)
Pyrococcus (184)
Thermococcus (467)
Aciduliprofundum (408)
Crenarchaeota (6315)
Aeropyrum (267)
Staphylothermus (158)
Desulfurococcus (54)
Sulfolobus (844)
Metallosphaera (44)
Pyrobaculum (447)
Thermoproteus (62)
Vulcanisaeta (301)
Thermofilum (366)
Thaumarchaeota (1339)
Nitrosopumilus (312)