Category specific clusters

Eukaryotes (254709)
Animals (79108)
Vertebrates (19728)
Mammals (4981)
Birds (609)
Reptiles (484)
Amphibians (410)
Fishes (4029)
Arthropods (18477)
Insects (14457)
Mites and ticks (1135)
Nematodes (9098)
Mollusks (2668)
Flatworms (2431)
Cnidarians (3639)
Plants (50658)
Eudicots (23536)
Mustard family (2740)
Rue family (400)
Mallow family (1118)
Pea family (6548)
Rose family (1215)
Cucumber family (143)
Spurge family (165)
Nightshade family (2087)
Monocots (5439)
Grass family (4826)
Palm family (228)
Green algae (8301)
Red algae (1292)
Fungi (48444)
Ascomycetes (25656)
Saccharomycetes (3603)
Sordariomycetes (6077)
Leotiomycetes (1780)
Eurotiomycetes (3476)
Dothideomycetes (3228)
Basidiomycetes (17595)
Microsporidians (1354)
Protists (61529)
Choanoflagellates (1443)
Amoebozoa (8252)
Dictyostelium (3670)
Entamoeba (3172)
Alveolates (18035)
Apicomplexans (7253)
Ciliates (6554)
Stramenopiles (11124)
Diatoms (3850)
Oomycetes (5665)
Euglenozoa (6578)
Bacteria (446616)
Proteobacteria (166883)
Gammaproteobacteria (58688)
Escherichia (1472)
Salmonella (1531)
Shigella (328)
Enterobacter (291)
Cronobacter (262)
Klebsiella (1128)
Citrobacter (50)
Blochmannia (37)
Riesia (19)
Moranella (7)
Raoultella (6)
Cedecea (14)
Kosakonia (24)
Kluyvera (5)
Yersinia (1327)
Serratia (348)
Rahnella (116)
Pectobacterium (230)
Sodalis (43)
Dickeya (50)
Erwinia (460)
Buchnera (115)
Wigglesworthia (48)
Pantoea (203)
Photorhabdus (113)
Proteus (89)
Xenorhabdus (752)
Providencia (176)
Edwardsiella (342)
Haemophilus (287)
Histophilus (19)
Pasteurella (89)
Mannheimia (375)
Actinobacillus (63)
Aggregatibacter (234)
Bibersteinia (145)
Xylella (611)
Xanthomonas (1471)
Stenotrophomonas (236)
Pseudoxanthomonas (22)
Lysobacter (829)
Dyella (87)
Vibrio (2311)
Aliivibrio (116)
Photobacterium (101)
Pseudomonas (3844)
Azotobacter (577)
Psychrobacter (276)
Acinetobacter (1755)
Moraxella (208)
Shewanella (822)
Idiomarina (160)
Colwellia (183)
Pseudoalteromonas (595)
Marinobacter (390)
Alteromonas (901)
Glaciecola (2)
Psychromonas (46)
Cellvibrio (87)
Microbulbifer (105)
Coxiella (600)
Legionella (983)
Methylomonas (183)
Francisella (853)
Thioalkalimicrobium (147)
Methylophaga (101)
Cycloclasticus (136)
Nitrosococcus (153)
Halorhodospira (10)
Thioalkalivibrio (244)
Spiribacter (131)
Halothiobacillus (232)
Halomonas (591)
Portiera (103)
Carsonella (148)
Kushneria (325)
Alcanivorax (287)
Kangiella (175)
Marinomonas (198)
Thalassolituus (248)
Aeromonas (459)
Oceanisphaera (33)
Thioglobus (28)
Betaproteobacteria (19337)
Neisseria (717)
Chromobacterium (149)
Ralstonia (491)
Cupriavidus (148)
Burkholderia (5180)
Paraburkholderia (444)
Polynucleobacter (12)
Pandoraea (429)
Bordetella (665)
Achromobacter (314)
Taylorella (176)
Advenella (87)
Rhodoferax (46)
Polaromonas (37)
Acidovorax (176)
Delftia (195)
Variovorax (183)
Comamonas (102)
Alicycliphilus (44)
Limnohabitans (35)
Hydrogenophaga (57)
Janthinobacterium (142)
Herbaspirillum (153)
Collimonas (125)
Massilia (40)
Thiomonas (158)
Rubrivivax (94)
Nitrosomonas (224)
Nitrosospira (62)
Methylotenera (7)
Methylovorus (79)
Methylopumilus (8)
Azoarcus (68)
Thauera (41)
Tremblaya (90)
Kinetoplastibacterium (76)
Epsilonproteobacteria (5477)
Helicobacter (1783)
Sulfurimonas (36)
Sulfuricurvum (119)
Campylobacter (1156)
Arcobacter (299)
Sulfurospirillum (220)
Sulfurovum (83)
Deltaproteobacteria (16036)
Geobacter (697)
Pelobacter (145)
Desulfuromonas (62)
Desulfovibrio (1399)
Lawsonia (137)
Desulfomicrobium (91)
Bdellovibrio (1355)
Desulfococcus (40)
Anaeromyxobacter (576)
Myxococcus (277)
Sorangium (426)
Alphaproteobacteria (36595)
Rickettsia (1480)
Orientia (198)
Wolbachia (271)
Anaplasma (496)
Ehrlichia (321)
Neorickettsia (265)
Mesorhizobium (497)
Sinorhizobium (727)
Ensifer (20)
Agrobacterium (140)
Rhizobium (877)
Neorhizobium (94)
Liberibacter (325)
Brucella (1151)
Ochrobactrum (85)
Bradyrhizobium (1216)
Rhodopseudomonas (227)
Nitrobacter (58)
Oligotropha (162)
Bosea (178)
Bartonella (348)
Methylobacterium (1809)
Chelatococcus (73)
Hyphomicrobium (337)
Filomicrobium (646)
Methylocystis (116)
Martelella (110)
Hodgkinia (141)
Caulobacter (307)
Brevundimonas (282)
Ruegeria (67)
Rhodobacter (222)
Roseobacter (59)
Paracoccus (123)
Ketogulonicigenium (182)
Phaeobacter (94)
Octadecabacter (102)
Celeribacter (27)
Rhodovulum (161)
Labrenzia (238)
Zymomonas (148)
Novosphingobium (104)
Sphingopyxis (234)
Sphingomonas (280)
Sphingobium (313)
Sphingorhabdus (46)
Erythrobacter (45)
Altererythrobacter (24)
Croceicoccus (23)
Porphyrobacter (8)
Gluconobacter (91)
Granulobacter (367)
Acidiphilium (203)
Gluconacetobacter (108)
Komagataeibacter (180)
Acetobacter (276)
Rhodospirillum (225)
Magnetospirillum (545)
Azospirillum (728)
Endolissoclinum (79)
Micavibrio (552)
Pelagibacter (25)
Other proteobacteria (657)
Firmicutes (67209)
Bacillus (7222)
Geobacillus (418)
Parageobacillus (12)
Anoxybacillus (266)
Lysinibacillus (177)
Halobacillus (107)
Virgibacillus (84)
Fictibacillus (153)
Staphylococcus (1893)
Macrococcus (89)
Listeria (1247)
Exiguobacterium (471)
Brevibacillus (373)
Paenibacillus (2556)
Alicyclobacillus (556)
Solibacillus (149)
Planococcus (276)
Sporosarcina (103)
Lactococcus (816)
Streptococcus (3504)
Lactobacillus (4032)
Pediococcus (94)
Enterococcus (953)
Melissococcus (92)
Vagococcus (29)
Leuconostoc (367)
Weissella (252)
Aerococcus (235)
Carnobacterium (100)
Jeotgalibaca (38)
Clostridium (3939)
Alkaliphilus (66)
Arthromitus (308)
Ruminiclostridium (749)
Ruminococcus (321)
Faecalibacterium (184)
Butyrivibrio (212)
Roseburia (237)
Coprococcus (10)
Blautia (34)
Lachnoclostridium (131)
Clostridioides (346)
Desulfitobacterium (256)
Desulfotomaculum (453)
Desulfosporosinus (199)
Dehalobacter (304)
Eubacterium (80)
Sulfobacillus (1254)
Thermoanaerobacter (138)
Tepidanaerobacter (177)
Caldicellulosiruptor (499)
Thermoanaerobacterium (162)
Halanaerobium (94)
Veillonella (190)
Selenomonas (267)
Pelosinus (321)
Acidaminococcus (147)
Erysipelothrix (338)
Tenericutes (5395)
Mycoplasma (2642)
Ureaplasma (151)
Phytoplasma (249)
Acholeplasma (310)
Mesoplasma (46)
Spiroplasma (1128)
Actinobacteria (50263)
Mycobacterium (4382)
Corynebacterium (3195)
Nocardia (634)
Rhodococcus (772)
Gordonia (209)
Streptomyces (5606)
Tropheryma (193)
Leifsonia (91)
Clavibacter (169)
Microbacterium (267)
Rhodoluna (83)
Rathayibacter (188)
Curtobacterium (93)
Cryobacterium (79)
Arthrobacter (329)
Pseudarthrobacter (71)
Glutamicibacter (24)
Kocuria (51)
Rothia (144)
Brachybacterium (109)
Isoptericola (18)
Cellulosimicrobium (69)
Cellulomonas (72)
Brevibacterium (210)
Cutibacterium (372)
Propionibacterium (146)
Acidipropionibacterium (165)
Tessaracoccus (151)
Nocardioides (97)
Nocardiopsis (189)
Frankia (566)
Amycolatopsis (775)
Pseudonocardia (689)
Actinoalloteichus (506)
Salinispora (78)
Micromonospora (170)
Actinoplanes (481)
Trueperella (84)
Actinomyces (189)
Bifidobacterium (1873)
Gardnerella (75)
Rubrobacter (528)
Eggerthella (49)
Olsenella (77)
Cyanobacteria (13645)
Synechocystis (198)
Synechococcus (1149)
Thermosynechococcus (60)
Cyanobium (100)
Leptolyngbya (262)
Prochlorococcus (1376)
Microcystis (280)
Cyanobacterium (13)
Geminocystis (41)
Cyanothece (533)
Oscillatoria (103)
Gloeobacter (517)
Nostoc (126)
Anabaena (111)
Calothrix (50)
Chloroflexi (3257)
Dehalococcoides (337)
Dehalogenimonas (190)
Roseiflexus (320)
Chloroflexus (360)
Deinococcus (1157)
Thermus (353)
Meiothermus (293)
Armatimonadetes (308)
Chlamydiae (2034)
Chlamydia (866)
Protochlamydia (223)
Verrucomicrobia (1734)
Akkermansia (432)
Planctomycetes (4419)
Pirellula (185)
Planctomyces (157)
Spirochaetes (7485)
Borreliella (231)
Borrelia (70)
Treponema (1193)
Spirochaeta (317)
Sphaerochaeta (342)
Leptospira (2263)
Brachyspira (1000)
Acidobacteria (1701)
Granulicella (131)
Terriglobus (111)
Elusimicrobia (287)
Fusobacteria (1290)
Fusobacterium (373)
Leptotrichia (169)
Synergistetes (659)
Fibrobacteres (1089)
Gemmatimonadetes (856)
Gemmatimonas (204)
Bacteroidetes (21447)
Bacteroides (1368)
Porphyromonas (330)
Parabacteroides (37)
Tannerella (95)
Prevotella (363)
Alistipes (179)
Salinibacter (389)
Rhodothermus (188)
Niabella (134)
Pedobacter (206)
Sphingobacterium (148)
Cyclobacterium (157)
Spirosoma (167)
Fibrella (128)
Hymenobacter (593)
Rufibacter (118)
Gramella (27)
Flavobacterium (402)
Capnocytophaga (210)
Riemerella (260)
Maribacter (25)
Cellulophaga (197)
Dokdonia (67)
Lacinutrix (23)
Muricauda (19)
Ornithobacterium (204)
Nonlabens (124)
Polaribacter (64)
Elizabethkingia (209)
Myroides (295)
Chryseobacterium (319)
Winogradskyella (28)
Tenacibaculum (22)
Lutibacter (19)
Formosa (35)
Sulcia (36)
Blattabacterium (69)
Chlorobi (995)
Chlorobaculum (30)
Chlorobium (45)
Pelodictyon (9)
Prosthecochloris (35)
Aquificae (1581)
Hydrogenobaculum (204)
Hydrogenobacter (163)
Thermocrinis (15)
Sulfurihydrogenibium (45)
Thermotogae (2248)
Thermotoga (202)
Pseudothermotoga (120)
Thermosipho (137)
Fervidobacterium (108)
Marinitoga (187)
Kosmotoga (89)
Deferribacteres (494)
Dictyoglomi (442)
Nitrospirae (1681)
Nitrospira (727)
Leptospirillum (891)
Thermodesulfobacteria (307)
Thermodesulfobacterium (25)
Saccharibacteria (320)
Archaea (39671)
Euryarchaeota (22773)
Methanocaldococcus (142)
Methanococcus (374)
Methanosarcina (2277)
Methanococcoides (44)
Methanohalophilus (56)
Methanosaeta (376)
Methanoculleus (320)
Methanoregula (156)
Methanocella (748)
Methanothermobacter (148)
Methanobrevibacter (595)
Methanobacterium (459)
Archaeoglobus (455)
Geoglobus (52)
Halobacterium (204)
Halodesulfurarchaeum (104)
Haloarcula (265)
Natronomonas (88)
Halorhabdus (119)
Halanaeroarchaeum (164)
Haloquadratum (177)
Haloferax (168)
Haloterrigena (34)
Natrinema (40)
Thermoplasma (92)
Ferroplasma (176)
Pyrococcus (105)
Thermococcus (551)
Aciduliprofundum (404)
Crenarchaeota (7217)
Aeropyrum (256)
Staphylothermus (146)
Ignicoccus (381)
Desulfurococcus (55)
Sulfolobus (831)
Metallosphaera (42)
Acidianus (46)
Pyrobaculum (477)
Thermoproteus (61)
Vulcanisaeta (298)
Thermofilum (490)
Thaumarchaeota (2697)
Nitrosopumilus (98)
Nitrososphaera (686)
Nanoarchaeota (59)
Bathyarchaeota (249)