Category specific clusters

Eukaryotes (215546)
Animals (57393)
Vertebrates (12537)
Mammals (4784)
Birds (492)
Reptiles (376)
Amphibians (190)
Fishes (965)
Arthropods (13216)
Insects (12021)
Nematodes (8428)
Mollusks (2723)
Cnidarians (2133)
Plants (43676)
Eudicots (17049)
Mustard family (2895)
Rue family (441)
Mallow family (861)
Pea family (2826)
Rose family (1601)
Cucumber family (154)
Spurge family (570)
Nightshade family (833)
Monocots (5275)
Grass family (4579)
Palm family (240)
Green algae (8247)
Red algae (1266)
Fungi (45737)
Ascomycetes (23734)
Saccharomycetes (4720)
Sordariomycetes (4785)
Leotiomycetes (1229)
Eurotiomycetes (3285)
Dothideomycetes (3319)
Basidiomycetes (16998)
Microsporidians (1337)
Protists (55262)
Choanoflagellates (1438)
Amoebozoa (8043)
Dictyostelium (3535)
Entamoeba (3106)
Alveolates (14844)
Apicomplexans (8246)
Ciliates (6482)
Stramenopiles (9297)
Diatoms (2140)
Oomycetes (5593)
Euglenozoa (6480)
Bacteria (385280)
Proteobacteria (139761)
Gammaproteobacteria (48650)
Escherichia (1505)
Salmonella (1557)
Yersinia (1374)
Shigella (319)
Pectobacterium (199)
Erwinia (469)
Photorhabdus (108)
Buchnera (100)
Wigglesworthia (52)
Sodalis (44)
Enterobacter (244)
Cronobacter (278)
Klebsiella (1130)
Citrobacter (22)
Serratia (281)
Proteus (94)
Edwardsiella (343)
Blochmannia (26)
Dickeya (49)
Xenorhabdus (733)
Pantoea (160)
Rahnella (113)
Moranella (4)
Providencia (155)
Raoultella (5)
Cedecea (15)
Haemophilus (290)
Histophilus (23)
Pasteurella (90)
Mannheimia (383)
Actinobacillus (65)
Aggregatibacter (238)
Bibersteinia (145)
Xylella (570)
Xanthomonas (1332)
Stenotrophomonas (175)
Pseudoxanthomonas (24)
Lysobacter (313)
Dyella (105)
Vibrio (2028)
Aliivibrio (118)
Photobacterium (74)
Pseudomonas (3662)
Azotobacter (588)
Psychrobacter (194)
Acinetobacter (1415)
Moraxella (126)
Shewanella (817)
Idiomarina (170)
Colwellia (144)
Pseudoalteromonas (407)
Marinobacter (318)
Alteromonas (833)
Glaciecola (5)
Psychromonas (41)
Coxiella (587)
Legionella (988)
Methylomonas (119)
Francisella (1124)
Thioalkalimicrobium (102)
Methylophaga (76)
Cycloclasticus (123)
Nitrosococcus (155)
Halorhodospira (20)
Thioalkalivibrio (224)
Spiribacter (62)
Halomonas (152)
Portiera (85)
Carsonella (154)
Alcanivorax (167)
Kangiella (145)
Marinomonas (180)
Thalassolituus (199)
Aeromonas (433)
Betaproteobacteria (16671)
Neisseria (675)
Ralstonia (489)
Cupriavidus (126)
Burkholderia (5079)
Paraburkholderia (425)
Polynucleobacter (12)
Pandoraea (427)
Bordetella (508)
Achromobacter (268)
Taylorella (172)
Advenella (83)
Polaromonas (48)
Acidovorax (115)
Delftia (120)
Variovorax (181)
Comamonas (83)
Alicycliphilus (47)
Limnohabitans (37)
Janthinobacterium (30)
Herbaspirillum (88)
Collimonas (61)
Massilia (41)
Thiomonas (147)
Rubrivivax (104)
Nitrosomonas (237)
Azoarcus (74)
Thauera (26)
Methylotenera (11)
Methylovorus (85)
Methylopumilus (10)
Tremblaya (83)
Kinetoplastibacterium (68)
Epsilonproteobacteria (5067)
Helicobacter (1751)
Sulfurimonas (37)
Sulfuricurvum (126)
Campylobacter (1068)
Arcobacter (247)
Sulfurospirillum (124)
Sulfurovum (84)
Deltaproteobacteria (14624)
Geobacter (707)
Pelobacter (36)
Desulfovibrio (1136)
Lawsonia (143)
Desulfomicrobium (92)
Bdellovibrio (1313)
Anaeromyxobacter (571)
Myxococcus (297)
Sorangium (517)
Alphaproteobacteria (30726)
Rickettsia (1494)
Orientia (192)
Wolbachia (264)
Anaplasma (484)
Ehrlichia (315)
Neorickettsia (267)
Mesorhizobium (358)
Sinorhizobium (710)
Agrobacterium (119)
Rhizobium (792)
Neorhizobium (134)
Liberibacter (309)
Brucella (1154)
Ochrobactrum (90)
Bradyrhizobium (1057)
Rhodopseudomonas (239)
Nitrobacter (59)
Oligotropha (176)
Bartonella (360)
Methylobacterium (1641)
Hyphomicrobium (341)
Filomicrobium (644)
Hodgkinia (142)
Caulobacter (331)
Brevundimonas (103)
Ruegeria (17)
Rhodobacter (270)
Roseobacter (86)
Paracoccus (66)
Ketogulonicigenium (212)
Phaeobacter (66)
Octadecabacter (133)
Celeribacter (31)
Zymomonas (162)
Novosphingobium (97)
Sphingopyxis (137)
Sphingomonas (170)
Sphingobium (202)
Erythrobacter (8)
Altererythrobacter (11)
Gluconobacter (99)
Granulobacter (396)
Acidiphilium (192)
Gluconacetobacter (133)
Komagataeibacter (112)
Acetobacter (228)
Rhodospirillum (225)
Magnetospirillum (418)
Azospirillum (710)
Endolissoclinum (73)
Micavibrio (544)
Pelagibacter (28)
Other proteobacteria (633)
Firmicutes (60677)
Bacillus (7004)
Geobacillus (530)
Anoxybacillus (29)
Lysinibacillus (201)
Staphylococcus (1803)
Listeria (1247)
Exiguobacterium (416)
Brevibacillus (177)
Paenibacillus (2520)
Alicyclobacillus (562)
Planococcus (101)
Lactococcus (825)
Streptococcus (3521)
Lactobacillus (3816)
Pediococcus (81)
Enterococcus (995)
Melissococcus (96)
Leuconostoc (341)
Weissella (207)
Aerococcus (197)
Carnobacterium (136)
Clostridium (3864)
Alkaliphilus (68)
Arthromitus (292)
Ruminiclostridium (730)
Ruminococcus (320)
Faecalibacterium (195)
Butyrivibrio (50)
Roseburia (257)
Coprococcus (13)
Blautia (15)
Lachnoclostridium (40)
Peptoclostridium (372)
Desulfitobacterium (256)
Desulfotomaculum (392)
Desulfosporosinus (198)
Dehalobacter (301)
Eubacterium (99)
Sulfobacillus (1226)
Thermoanaerobacter (136)
Tepidanaerobacter (178)
Caldicellulosiruptor (491)
Thermoanaerobacterium (167)
Halanaerobium (98)
Selenomonas (150)
Pelosinus (329)
Acidaminococcus (163)
Erysipelothrix (362)
Tenericutes (5007)
Mycoplasma (2497)
Ureaplasma (143)
Phytoplasma (217)
Acholeplasma (318)
Mesoplasma (45)
Spiroplasma (968)
Actinobacteria (43539)
Mycobacterium (4213)
Corynebacterium (3048)
Nocardia (286)
Rhodococcus (646)
Gordonia (174)
Streptomyces (4875)
Tropheryma (198)
Leifsonia (89)
Clavibacter (194)
Microbacterium (120)
Rathayibacter (195)
Arthrobacter (322)
Pseudarthrobacter (79)
Glutamicibacter (29)
Kocuria (55)
Rothia (137)
Cellulomonas (77)
Propionibacterium (732)
Nocardiopsis (179)
Frankia (576)
Amycolatopsis (834)
Pseudonocardia (649)
Salinispora (79)
Micromonospora (179)
Actinoplanes (495)
Trueperella (89)
Actinomyces (148)
Bifidobacterium (1813)
Gardnerella (74)
Rubrobacter (506)
Eggerthella (53)
Olsenella (79)
Cyanobacteria (12518)
Synechocystis (201)
Synechococcus (1077)
Thermosynechococcus (60)
Microcystis (286)
Cyanothece (551)
Cyanobacterium (15)
Geminocystis (42)
Leptolyngbya (102)
Oscillatoria (101)
Gloeobacter (507)
Nostoc (143)
Anabaena (117)
Calothrix (58)
Prochlorococcus (1077)
Chloroflexi (2844)
Dehalococcoides (375)
Dehalogenimonas (131)
Roseiflexus (306)
Chloroflexus (359)
Deinococcus (1105)
Thermus (301)
Meiothermus (281)
Armatimonadetes (313)
Chlamydiae (1991)
Chlamydia (851)
Protochlamydia (219)
Verrucomicrobia (1300)
Spirochaetes (7238)
Borreliella (221)
Borrelia (58)
Treponema (1171)
Spirochaeta (378)
Sphaerochaeta (360)
Leptospira (2198)
Brachyspira (950)
Acidobacteria (1520)
Granulicella (127)
Terriglobus (102)
Fibrobacteres (1051)
Elusimicrobia (264)
Fusobacteria (1181)
Fusobacterium (377)
Leptotrichia (102)
Gemmatimonadetes (699)
Synergistetes (524)
Planctomycetes (2044)
Bacteroidetes (16832)
Bacteroides (1254)
Porphyromonas (324)
Prevotella (386)
Alistipes (188)
Salinibacter (445)
Rhodothermus (294)
Pedobacter (103)
Sphingobacterium (77)
Cyclobacterium (172)
Spirosoma (169)
Hymenobacter (423)
Rufibacter (105)
Flavobacterium (279)
Capnocytophaga (158)
Riemerella (267)
Cellulophaga (239)
Dokdonia (56)
Muricauda (18)
Ornithobacterium (229)
Nonlabens (71)
Elizabethkingia (194)
Myroides (258)
Chryseobacterium (175)
Sulcia (28)
Blattabacterium (61)
Chlorobi (947)
Chlorobaculum (25)
Chlorobium (50)
Pelodictyon (13)
Aquificae (1534)
Hydrogenobaculum (201)
Hydrogenobacter (162)
Thermocrinis (15)
Sulfurihydrogenibium (46)
Thermotogae (1964)
Thermotoga (199)
Pseudothermotoga (122)
Thermosipho (78)
Fervidobacterium (107)
Kosmotoga (85)
Deferribacteres (470)
Dictyoglomi (422)
Nitrospirae (1652)
Nitrospira (718)
Leptospirillum (865)
Thermodesulfobacteria (294)
Thermodesulfobacterium (23)
Saccharibacteria (239)
Archaea (37657)
Euryarchaeota (21228)
Methanocaldococcus (143)
Methanococcus (371)
Methanosarcina (2111)
Methanococcoides (43)
Methanosaeta (368)
Methanoculleus (180)
Methanoregula (163)
Methanocella (738)
Methanothermobacter (126)
Methanobrevibacter (493)
Methanobacterium (423)
Archaeoglobus (452)
Geoglobus (46)
Halobacterium (211)
Haloarcula (282)
Natronomonas (85)
Halorhabdus (129)
Halanaeroarchaeum (195)
Haloquadratum (169)
Haloferax (173)
Natrinema (46)
Thermoplasma (153)
Pyrococcus (138)
Thermococcus (538)
Aciduliprofundum (404)
Crenarchaeota (7051)
Aeropyrum (255)
Staphylothermus (147)
Ignicoccus (377)
Desulfurococcus (57)
Sulfolobus (885)
Metallosphaera (46)
Pyrobaculum (467)
Thermoproteus (59)
Vulcanisaeta (303)
Thermofilum (483)
Thaumarchaeota (2602)
Nitrosopumilus (119)
Nitrososphaera (707)
Nanoarchaeota (56)
Bathyarchaeota (242)