Sequence Similarity Search

BLAST Search

BLAST	FASTA	KEGG2

Enter query sequence:

Sequence data

>cfa:100686967 LIG1; ligase I, DNA, ATP-dependent; K10747 DNA ligase 1 [EC:6.5.1.1] (A)
MQRSIMSFFYPKKEGKAKKPEKETSNSIRETEPPPKVALKERNGEVPESDSPVKRPGRKV
ARVLGSEGEEEDEALTPSKGQKPAPGSPQVSPPSPVTYPESSPSLSSTSPVDISAGIPKR
RTARKQLPKRTIQDVLEEQSKDEDREAKKKKEEEESETPPESLSESEVTQEKEAEGEDQP
VTSPEHRETSPEPPVDSTLEPAVSGKQEAQNEDLAKPPTRAPKTVSSFFAPRKPATKKEG
KEEDPGTPRQEETKGPLDPPSYNPAKNNYHPIDDACWKPGQKVPYLAVARTFEKIEEVSA
RLRMVETLSNLLRSVVALSPPDLLPILYLSLNRLGPPQQGLELGVGDGVLLKAVAQATGR
QLDSVKAEAAEKGDVGLVAENSRSTQRLMLPPPALTAAGVFAKFRDIARLAGSASTAKKI
DVIKGLFVACRHSEARFIARALSGRLRLGLAEQSVLAALAQAVSLTPPGQEFPPAVVDAG
KGRTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLEHLPEHCRLSPGVPLKPML
AHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHVLEGGEVKIFSRNQEDNTGKYPDIISR
IPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDAAEIQVQVCLYAFDLIY
LNGESLVREPLSRRRQLLRENFVETEGEFVFATSLDTKDTDQIAEFLEQSVKDSCEGLMV
KTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLAAYD
EESEELQAICKLGTGFSDEELEEHYQRLQALVLPTPRSYVRVDGAVAPDHWLDPSAVWEV
KCADLSLSPIYPAARGLVDGEKGISLRFPRFIRVREDKKPEEATTSGQVACLYMKQSQIQ
NQQGADLDSDSDFY

Select program and database:

BLASTP (prot query vs prot db)
BLASTX (nucl query vs prot db)

KEGG GENES

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KEGG MGENES
KEGG VGENES
nr-aa (GenBank, UniProt, RefSeq, PRF and PDBSTR)
Swiss-Prot UniProt RefSeq PRF
PDBSTR

BLASTN (nucl query vs nucl db)
TBLASTN (prot query vs nucl db)

KEGG GENES

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KEGG EGENES
KEGG MGENES
KEGG VGENES
KEGG GENOME

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KEGG VGENOME
nr-nt (GenBank, EMBL and RefSeq)
dbEST dbGSS HTGs dbSTS
RefSeq
EPD

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