BLAST Search
BLAST
FASTA
KEGG2
Enter query sequence:
Sequence data
>pcr:Pcryo_1291 UvrD/REP helicase; K03582 exodeoxyribonuclease V beta subunit [EC:3.1.11.5] (A) MTDFTDPTNTTDSFTQSDLFDEYSDELTLSAVPERKNDVIPAVDVDLTGKHLIEASAGTG KTWTLTGIVLRLLIEARRAPEQIIATTFTRAAAAEMRQRIHDRLVDFYQLLQWVNSLSAE PNNKDALYPDVLQVMPESNKDKQAGKGSSVDSNAGTGMDEFNKDIAADRQAAAEKRKQVK KDRENWLVNQAKYARLDAVMDDPINLHLTGFLLDHVHGYPMAEAIRRTALVLTTLDKLFV GTLDSLAQKWLIEYSSETGHQQGMAIIEDSSIEQVTDSIIHDELRQFQSRLYYEQPKLYA LMDQQGKLTAVSDHKKYVTRSLKFISAPIDEIKLEQGFDFGLYERLLNEFAQLDLVDIQP YLNPDYRKSQGFRGGSNLTKQFDAIIDVHQKILEYQLTFNSYLNESENKILTSLQDARYP DEDGKIKNFNKNKEKEHQTLFELETISKLMVLLDMLDSLNQHILLVLANLNRHIVLAVRD RLPVILEERGETTFSLQMVRLNQALTGRQGDKLARYIRHHYPVALIDESQDINGEQAIMI ESIYLPKNKRKQSDSDKQSTTNKTSHEFLLLVGDPKQAIYGFRGGDVANYNYMKAQFEKS SLWTLDINRRSNAGVIDALNCWFGMPTETAADNKLAQLGSSIYYQHIKASKPENQLSWFN EPTTQNSALVTEVLSAQPVSLLHLPYDKDKELEYDEFEITARHIATLLSSNQTLKGKPIQ PSDIGVLARTKKDLKRVEDELVKLNVPTLTTSDVSIFETIMAEDVAALLSAMLYPYRHDM INRVLTSHLYGLSIKEVKAMMTDHESGVTEGSYLSSASTKAVNNKKSYQDFITYLKQAAQ NWQHFGVLSALHYLLDKNPVQPQGVWQALATHPEGDRHIMDLRHMMDVLAQYGIGMGEHE LLAWFRQNIDAAPSSDWAKQYPLPTESGVQLMTIHKSKGLEFPIVYVLGMGDASRKAGNN EKFGLYLYNAQQAPSILMQQSAESQSTGNQRRFSPVRGSATTEDCYTEIETKEGFDELRR LGYVAFTRASEQLYVVLRDPNNKTGFELKPAFYWLESPEAKFDLPDRLKGIVGMLRGHNV NEFYNNDSNGANALGLAGNATLATAKSITETIEYAPFAEVMKTNYFYGWAKTSFTALARQ LDESTQALAVVDERMDDAIDIDMTESVVSSSNSGFFKPVSELSLKSEDDIRFTFVKGANA GTFLHEIFEKIDFNNKSQWSQVIDRAVSSYQLPLVYSSAEQQSRLLQANNRENGRIPDLD SMDATKHEALLNWFEEVLKAPLLASNQPLQSINASQRFAELEFNMGLSERFKAQDINSLF QQYLPNEVDKHVNLVPQNKTHLYRYLRGEIDLVYEHAGKYYVVDYKSNFLGNSLSDYDVS TLKQAMSKAGYWLQAAIYQVALHRFLAMRISDYAGNEDKYLGAVEYVFLRGVYDPNSQIA ADLLQDVREADNSHSMPNDRYGLVTWDIPIEFIKALDALFGLPD
Select program and database:
BLASTP (prot query vs prot db)
BLASTX (nucl query vs prot db)
KEGG GENES
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organism code or category
KEGG MGENES
KEGG VGENES
nr-aa (GenBank, UniProt, RefSeq, PRF and PDBSTR)
Swiss-Prot
UniProt
RefSeq
PRF
PDBSTR
BLASTN (nucl query vs nucl db)
TBLASTN (prot query vs nucl db)
KEGG GENES
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organism code or category
KEGG EGENES
KEGG MGENES
KEGG VGENES
KEGG GENOME
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organism code or category
KEGG VGENOME
nr-nt (GenBank, EMBL and RefSeq)
dbEST
dbGSS
HTGs
dbSTS
RefSeq
EPD
Output options:
Set the maximum number of database sequences to be reported:
Set the maximum number of alignments to be displayed:
Optional parameters:
(see
manual
for details)
Scoring matrix:
BLOSUM62
BLOSUM80
PAM30
PAM70
PAM250
(except for BLASTN)
Filter:
None
Default (DUST in BLASTN, SEG in others)
Alignment view:
Pairwise
master-slave with identities
master-slave without identities
flat master-slave with identities
flat master-slave without identities
Get ASN.1 for SeqAnnot
Get ASN.1 for the Blast Object
(except for BLASTX)
Additional options:
(delimited by whitespaces)
Feedback
KEGG
GenomeNet
Kyoto University Bioinformatics Center
