BLAST Search
BLAST
FASTA
KEGG2
Enter query sequence:
Sequence data
>ssc:100620405 K11840 ubiquitin carboxyl-terminal hydrolase 9/24 [EC:3.4.19.12] | (RefSeq) USP24; ubiquitin carboxyl-terminal hydrolase 24 isoform X1 (A) MESEEEQHMTTLLCMGFSDPATIRKALRLAKNDINEAVALLTNERPGLDYGGYEPMDSGG GPSPGPGGGSRGDGSGDGGGGPSRGGSTGGGGGFDPPPAYHEVVDAEKNDENGNCSGEGI EFPTTNLYELESRVLTDHWSIPYKREESLGKCLLASTYLARLGLSESDENCKRFMDRCMP EAFKKLLTSSAVHKWGTEIHEGIYNMLMLLIELVAERIKQDPIPTGLLAVLTMAFNPDNE YHFKNRMKVSQRNWAEVFGEGNMFAVSPVSTFQKEPHGWVVDLVNKFGELGGFAAIQAKL HSEDIELGAVSALVQPLGVCAEYLNSSVVQPMLDPVILTTIQDVRSVEEKDLKDKRLVSI PELLSAIKLLCMRFQPDLVTVVDDLRLDILLRMLKSPHFSAKMNSLKEVTKLIEDSTLSK SVKNAIDTDRLLDWLVENSVLSIALEGNIDQAQYCDRIKGIIELLGSKLSLDELTKIWKI QSGQSSTVIENIHTIIAAAAVKFNSDQLNHLFVLIQKSWETESDRVRQKLLSLIGRIGRE ARYETTSGKVLDVLWELAHLPTLPSSLIQQALEEHLTILSDAYAVKEAIKRSYIIKCIED IKRPGEWSGLEKNKKDGFKQGGLTGDYVSLPGYTETKQRSSQLNNPQFVWVVPALRQLHE ITRSFIKQTYQKQDKSIIQDLKKNFEIVKLVTGSLIACHRLAAAVAGPGGLTGSTLVDGR YTYREYLEAHLKFLAFFLQEATLYLGWNRAKEIWECLVTGQDVCELDREMCFEWFTKGQH DLESDVQQQLFKEKILKLESYEITMNGFNLFKTFFENVNLCDHRLKRQGAQLYVEKLELI GMDFIWKIAMESPDEEIANEAIQLIINYSYINLNPRLKKDSVSLHKKFIADCYTRLEAAS SALGGPTLTHAVTRATKMLTATAMPTVATSVQSPYRSTKLVIIERLLLLAERYVITIEDF YTVPRTILPHGASFHGHLLTLNVTYESTKDTFTVEAHSNETIGSVRWKIAKQLCSPVDSI QIFTNDSLLTVNKDQKLLHQLGFSDEQILTVKTSGSGTPSGSSADSSTSSSSSSSGVFSS SYAMEQEKSLPGVVMALVCNVFDMLYQLANLEEPRITLRVRKLLLLIPTDPAIQEALDQL DSLGRKKTLLSETTSQSSKSPSLSSKQQHQPSASSILESLFRSFAPGMSTFRVLYNLEVL SSKLMPTADDDMARNCAKSFCENFLKAGGLSLVVNVMQRDSIPSEVDYETRQGVYSICLQ LARFLLVGQTLPTLLDEDLAKDGIEALSSRPFRNVSRQTSRQMSLCGTPEKSSYRQLSVS DRSSIRVEEIIPAARVAIQTMEVSDFTSTVACFMRLSWAAAAGRLDLVGSSQPIKESNSL FPAGIRNRLSSSGSNCSSGSEGDPVALHAGICVRQQSVSTKDSLIAGEALSLLVTCLQLR SQQLASFYNLPCVADFIIDILLGSPSAEIRRVACDQLYTLSQTDTSAHPDVQKPNQFLLG VILTAQLPLWSPTSIMRGVNQRLLSQCMEYFDLRCQLLDDLTTSEMEQLRISPATMLEDE ITWLDNFEPNRTAECETSEADNILLAGHLRLIKTLLSLCGAEKEMLGSSLIKPLLDDFLF RASRIILNSHSPAGSAAISQQDFHPKCSTVNSRLAAYEVLVMLADSSPSNLQIITKELLS MHHQPDPALTKEFDYLPPVDSRSSSGFVGLRNGGATCYMNAVFQQLYMQPGLPESLLSVD DDTDNPDDSVFYQVQSLFGHLMESKLQYYVPENFWKIFKMWNKELYVREQQDAYEFFTSL IDQMDEYLKKMGRDQIFKNTFQGIYSDQKICKDCPHRYEREEAFMALNLGVTSCQSLEIS LDQFVRGEVLEGSNAYYCEKCKEKRITVKRTCIKSLPSVLVIHLMRFGFDWESGRSIKYD EQIRFPWMLNMEPYTVSGMARQDSSSEVGENGRSTDQGGGGSPRKKVALTENYELVGVVV HSGQAHAGHYYSFIKDRRGCGKGKWYKFNDTVIEEFDLNDETLEYECFGGEYRPKVYDQT NPYTDVRRRYWNAYMLFYQRVSDQNSPVLPKKSRVSVVRQEAEDLSLSAPSSPEISPQSS PRPHRPNNDRLSILTKLVKKGEKKGLFVEKMPARIYQMVRDENLKFMKNRDVYSSDYFSF VLSLASLNATKLKHPYYPCMAKVSLQLAIQFLFQTYLRTKKKLRVDTEEWIATIEALLSK SFDACQWLVEYFISSEGRELIKIFLLECNVREVRIAVATILEKTLDSALFYQDKLKSLHQ LLEVLLALLDKDVPENCKNCAQYFFLFNTFVQKQGIRAGDLLLRHSALRHMISFLLGANR QNNQIRRWSSAQAREFGNLHNTVALLVLHSDVSSQRNVAPGIFKQRPPISVAPSSPLLPL HEEVEALLFLSEGKPYLLEVMFALRELTGSLLALIEMVVYCCFCNEHFSFTMLHLIKNQL ETAPPHELKNTFQLLHEILVIEDPIQVERVKFVFETENGLLALMHHSNHVDSSRCYQCVK FLVTLAQKCPAAKEYFKENSHHWSWAVQWLQKKMSEHYWTPQSNVSNETSTGKTFQRTIS AQDTLAYATALLNEKEQSGSSNGSESSPANENGERHLQQGSESPMMIGELRSDLDDVDP
Select program and database:
BLASTP (prot query vs prot db)
BLASTX (nucl query vs prot db)
KEGG GENES
Eukaryotes
Prokaryotes
Viruses
Favorite
organism code or category
KEGG MGENES
Environmental
Organismal
Favorite
samples
Microbial Reference Genes
Ocean (OM-RGC)
Human gut (IGC)
nr-aa (GenBank, UniProt, RefSeq and PDBSTR)
Swiss-Prot
UniProt
RefSeq
PDBSTR
UniRef50
UniRef90
UniRef100
Virus-Host DB
Environmental Viral Genome (predicted proteins)
All
Aylward_2021 (PMID:34705818)
Gaia_2023 (PMID:37076623)
Backstrom_2019 (PMID:30837339)
Buscaglia_2024 (PMID:39178288)
Fang_2024 (doi:10.1101_2024.07.08.602415)
Liang_2024 (PMID:39039586)
Minch_2024 (doi:10.1101_2024.07.26.605358)
Monir_2020 (PMID:32249765)
Piedade_2024 (PMID:39448562)
Zhang_2024 (PMID:39312489)
Schulz_2020 (PMID:31968354)
Zayed_2022 (PMCID:PMC10990476)
Hou_2024 (PMID:39389057)
Roux_2016 (PMID:27654921)
Gregory_2019 (PMID:31031001)
IMGVR_2022 (PMCID:PMC9825611)
IMGVR_2023 (PMCID:PMC10767988)
Camarillo-Guerrero_2021 (PMCID:PMC7895897)
Gregory_2020 (PMCID:PMC7443397)
Sheam_2025 (PMCID:PMC12192438)
Graham_2024 (PMCID:PMC11222151)
Ma_2024 (PMID:38383853)
Wu_2024 (PMCID:PMC11310336)
Medvedeva_2026 (PMID:41315738)
Yutin_2024 (PMCID:PMC11253617)
Gaia_2025 (doi:10.1101_2024.03.23.586382)
BLASTN (nucl query vs nucl db)
TBLASTN (prot query vs nucl db)
KEGG GENES
Eukaryotes
Prokaryotes
Viruses
Favorite
organism code or category
KEGG MGENES
Environmental
Organismal
Favorite
samples
KEGG GENOME
Favorite
organism code or category
Microbial Reference Genes
Ocean (OM-RGC)
Human gut (IGC)
Ocean (MATOU)
nr-nt (GenBank, EMBL and RefSeq)
dbEST
dbGSS
HTGs
dbSTS
RefSeq
Ribosomal Databases
SILVA (SSU, 16S/18S)
SILVA (LSU, 23S/28S)
PR2 (Protist Reference)
RDP (Prokaryotic 16S)
RDP (Fungal 28S)
EPD
Virus-Host DB Genes
Genomes
Environmental Viral Genome
All
Aylward_2021 (PMID:34705818)
Gaia_2023 (PMID:37076623)
Backstrom_2019 (PMID:30837339)
Buscaglia_2024 (PMID:39178288)
Fang_2024 (doi:10.1101_2024.07.08.602415)
Liang_2024 (PMID:39039586)
Minch_2024 (doi:10.1101_2024.07.26.605358)
Monir_2020 (PMID:32249765)
Piedade_2024 (PMID:39448562)
Zhang_2024 (PMID:39312489)
Schulz_2020 (PMID:31968354)
Zayed_2022 (PMCID:PMC10990476)
Hou_2024 (PMID:39389057)
Roux_2016 (PMID:27654921)
Gregory_2019 (PMID:31031001)
IMGVR_2022 (PMCID:PMC9825611)
IMGVR_2023 (PMCID:PMC10767988)
Camarillo-Guerrero_2021 (PMCID:PMC7895897)
Gregory_2020 (PMCID:PMC7443397)
Sheam_2025 (PMCID:PMC12192438)
Graham_2024 (PMCID:PMC11222151)
Ma_2024 (PMID:38383853)
Wu_2024 (PMCID:PMC11310336)
Medvedeva_2026 (PMID:41315738)
Yutin_2024 (PMCID:PMC11253617)
Gaia_2025 (doi:10.1101_2024.03.23.586382)
Environmental Viral Genome (predicted CDS)
All
Aylward_2021 (PMID:34705818)
Gaia_2023 (PMID:37076623)
Backstrom_2019 (PMID:30837339)
Buscaglia_2024 (PMID:39178288)
Fang_2024 (doi:10.1101_2024.07.08.602415)
Liang_2024 (PMID:39039586)
Minch_2024 (doi:10.1101_2024.07.26.605358)
Monir_2020 (PMID:32249765)
Piedade_2024 (PMID:39448562)
Zhang_2024 (PMID:39312489)
Schulz_2020 (PMID:31968354)
Zayed_2022 (PMCID:PMC10990476)
Hou_2024 (PMID:39389057)
Roux_2016 (PMID:27654921)
Gregory_2019 (PMID:31031001)
IMGVR_2022 (PMCID:PMC9825611)
IMGVR_2023 (PMCID:PMC10767988)
Camarillo-Guerrero_2021 (PMCID:PMC7895897)
Gregory_2020 (PMCID:PMC7443397)
Sheam_2025 (PMCID:PMC12192438)
Graham_2024 (PMCID:PMC11222151)
Ma_2024 (PMID:38383853)
Wu_2024 (PMCID:PMC11310336)
Medvedeva_2026 (PMID:41315738)
Yutin_2024 (PMCID:PMC11253617)
Gaia_2025 (doi:10.1101_2024.03.23.586382)
Scoring matrix:
BLOSUM62
BLOSUM80
PAM30
PAM70
PAM250
(except for BLASTN)
Filter:
None
DUST in BLASTN, SEG in others
Output options:
Set the maximum number of database sequences to be reported:
Set the maximum number of alignments to be displayed:
Optional parameters:
(see
manual
for details)
E-value threshold
Alignment view:
Pairwise
master-slave with identities
master-slave without identities
flat master-slave with identities
flat master-slave without identities
Get ASN.1 for SeqAnnot
Get ASN.1 for the Blast Object
(except for BLASTX)
Additional options:
(delimited by whitespaces)
Feedback
KEGG
GenomeNet
Kyoto University Bioinformatics Center
