BLAST Search
BLAST
FASTA
KEGG2
Enter query sequence:
Sequence data
>tru:101079534 K11853 ubiquitin carboxyl-terminal hydrolase 34 [EC:3.4.19.12] | (RefSeq) usp34; ubiquitin carboxyl-terminal hydrolase 34 isoform X1 (A) MCENCAELVEVLNEISDADGSDGGFQLKKEHALRVLAYISSWTQRQCLCCFKEYKHLEVF NQLVYALINLVIAQISSLRDRLCSTHDHTHKGGAFRVKGVGSEWSSVEGAAGSLPQPSSP GEDEHVNVERDSAEEDGGDTPELNQGQGSELPGEDPVNVRQPINVSGSEGGAESHDSVSQ DSFSSWSTEEREKLLLCAAKIFQIQFPLYTAYKHNTHPTIEDISAHESNILGSFCDMNDV EVPLHLLRYVCLFCGKHGLSLMKECFESGTPESLPFPIAHAFITIVSNIRIWLHIPAVMQ HIIPFRNYVIRYLCKLSDQELRQSAARNMADLMWSTVKEPLDSTLCFDKESLDLAFKYFM SPTLTMRLAGLSQITNQLHTFNDVCNNESLVSDTETSIAKELADWLIHNNVVEHIFGPNL HIEIIKQCQVILNFLAAESRLSTQHVDCIWAAAQLKHCSRYIHDLFPSLIKNLDPVPLRH VLNLVSGLHPSAHTEQTLYLASMLIKALWNNALAAKAQLSKQSSFASLLNTNIPMGNKKG SPAASPDSSDNSDMQHSGGSDMEMDDQMMTGSKRGQQRLSDTEESMQGSSDETANSVEEG SSGPGSSSGHSDVSSNEAASSRASQSAGSPGSEMHSDDMVDSEALKEDDEDEEEEEEDDE DEDEEEDEDKGDQSAADGGQQKESKEQPETRKRKAGEALCEGNSQGAGPSCSGGKDNSKV LPFSPETSAVMATAASVSLEGRMRLFDACSASSSARPDEGASPQQPPNISSTQRVQGPQE PSCLSRTGDFLGEAMGNELFNCQRFIAPQHHHHHHHHHEGALVEDMLSADDVSCSSSQVS AKSEKNMADFDGEESGCEEELVQINSHAELSSHLQQHLPNLASIYHEHLVQGPAVHKHQY SSHAVTDINLDNVCKKGNTLLWDLVQDEDAVHLSEGLINEAEKLLCSLVCWFTDRQIRMR FIEGCLDNLAHHRSVVVSLRLLPKLFGTFQQFGSSYDTHWITMWAEKELHMMKLFFDDLQ HYIREVHEHRHRFALYSHSAEVQVRLQFLTCVFSTLGSPDHFRLSLEQVDILWHCLVEDA ECYDDALHWFLNQVRSKDQHAMGMETYKHLFLEKMPQLKPETISMTGLNLFQHLCNLARL ATSALDNASSCELCGMDQLWGIALRAQSADISRAAIQYINSYYINAGKTGLEKEQEFIRK CMESLLMASANLEKYAQSSLTSIERGLLMLKTHLEAFRRRFAYHLRQWQIEGTGISSHLK ALSDKQSLPLRIVCQPAGLPDKMTIEMYPSDQVADLRAEVTHWYENLQKEQMNQQAQLQE FGQSGRQPGDFPGGLMGPVRMISSGHELTTDYDEKTLHELGFKDMQMVFVSLGAPRRERK GEGIQLPASCLPPPQKEHIPMLLLLQEPHLTTLFELLEMLACFKPPSHTTEKDQEDPESA RCEELHLHAENLSRRVWELLMLLPTCPKMLQAFQNISDDTTGEGLCWKELLRIKSPHKLL YALEIIEALGKPNRHIHRESTGSYSDLYPDSDDSTEDQIENSKNSWSCKFVSSGGLQLLL EIFNSAILEPKEQESWTVWLLDCLACLLKLICQFAVDPADLDLAYHDVFSWSGLTDGQRK RAWHGKSRKSTVEHGKGLHIPRLTEVFLGLVQETNLIQRLINVAYTYDNLAHRVLKAQSD HRSRHEVTHYSMWLLVSWAHCSSAVKSSLADSDHLHDWLKKLTLLVPEPAVRHEACNGLY KLSLSGLEGGDSINRSFLLLAASTLLKFLPDAQALKPLRVEDYEEEPLLRKGCKEYFWLL CKLIDNIHVKDASQKVSPSLSLAGSVQTTLLDLDSLARHLADCIRSREILDQQDGAIEDD GLTGLLRLATSVLKHKPPFKFSREGQEFLRDIHNLLFLLPSLADRAQPKCKSHASRAAAY DLLVETVKGSMENYRLLHNWVMSQHMQTSHAAYKWDYWPHDDVRAECRFVGLTNLGATCY LASTIQQLYMIPEARQAVFTAKYAEDIKHKTTLLELQKMFTYLMESERKAYNPRPFCKTY TMDKQPLNTGEQKDMTEFFTDLITKMEEMSHELKNTVKTLFGGVITNNVVSLDCDHVSQT AEEFYTVRCQVADMKNIYESLDEVTIKDTLEGDNMYTCSQCGKKVRAEKRACFKKLPRIL SFNTMRYTFNMVTMMKEKVNTHFSFPLRLDMTPYTEDFLMGKGERKEGFREEGEPKVTGS YEYDLIGVTVHTGTADGGHYYSFIRDIINPHAYKNNKWYLFNDAEVKSFDSAQLASECFG GEMTTKTYDSVTDKFMDFSFEKTHSAYMLFYKRVEPEEENGKDFSFDVSPDLLEWIWHDN MQFLQDKNIFEHTYFGFMWQLCSSIPSTLPDPKAVSLMTAKLSTSFVLETFIHSKEKPTM LQWIELLTKQFNNSQAACEWFLDQMADDNWWPMQILIKCPNQIVRQMFQRLCIHVIQRLR PVHAHLYLQPGMEDSSDDMDGPVEDIGSRSCVTRFVKTLLSIMEHGVKPHSKHLTEYFAF LYEFAKMGEEESQFLLSLQAISIMVHFYMGTKGPDNPQVEVLSEEEGEEEDEEEDILSLA EEKYRPAALEKMIALIALLVEQSRSERHLTLSQSDMAALTGGKGFPFLFQHIRDGINIRQ TCNLIFSLCRYNNRLAEHIVSMLFTSIAKLTPEAANPFFKLLTMLMEFAGGPPGMPSFAS YILQRIWEVIEYNPSQCLDWLAVQTPRNKLAHSWVLQNMENWVERFLLAHNYPRVRTSAA YLLVSLIPSNSFRQMFRSTRSLHLPTRELPLSPDTTMVLHQVYNLLLGLLGRAKLYVDAS VHGTTKLVQYFSFMTYCLISKTEKLMFTGYFMDLWNLFQPKLSEPAIATNHNKQALLTFW YNMCVDCPENVRLVVQNPVVTKNIAFNYILADHDDQEVVLFNRSMLPAYYGILRMCCEQS PAFTRQLASHQNIQWAFKNLTPHASQYPGAVEELFNLMQLFVAQRADMREEELDDVKQFK KTTINCYLRCLDGRSCWTTLISAFRILLENDEDRLLVVFNRGLILMTESFNTLHMMYHEA TACHVTGDLVELLSIFLSVLKATHPYLHRKDVKQALIQWQERIDFAHKLLTLLNSYSPPE LRNACLDVLKELVLLSPHDFLHTLVPFLQHNHCTYHHSNIPMSFGPYLPCRENIKLMGAK NNIRPPRPELNMCLLPSMVESRKGKDEVYDQMLLDYFLSYHQFIHLLCRVAINCEKFTDT LVKLSVLIAYEGLPLHLTLFPKLWAELSQSQAVLAKTCMKLLCEDPVFSEYIKVILMEER TFLNNNTAYSFLTCFLHKVQVLSASSCSNLVDVLVTNLLNEQSSLQPELTAAQWMEFSKS SNQLNAELRVLVLLLSIHPPQSVDPALGPTLQELLGRCRVCLHQRNTLELEAKDHKTKVE DEGATPVKRRRMSSDEDRVGEPASLCSSSLPPCSEVKPDQQEALTPTSTSDTETRDSSSL IDPGTEQDPPTPDPAPSGNLDMSPKEEKMEASSSSSSFSSSSSLLQETGEGLVQGKEIEA PLGVEGGVAPATQSEKVKEEKAASKAGSSLAPPLSEDTPFSTSLETVGEGLEYSSGHTPS PQAFLSVGPPADMLDMLYRTVEAAITIVTKLSAKGPPSS
Select program and database:
BLASTP (prot query vs prot db)
BLASTX (nucl query vs prot db)
KEGG GENES
Eukaryotes
Prokaryotes
Viruses
Favorite
organism code or category
KEGG MGENES
Environmental
Organismal
Favorite
samples
Microbial Reference Genes
Ocean (OM-RGC)
Human gut (IGC)
nr-aa (GenBank, UniProt, RefSeq and PDBSTR)
Swiss-Prot
UniProt
RefSeq
PDBSTR
UniRef50
UniRef90
UniRef100
Virus-Host Database
BLASTN (nucl query vs nucl db)
TBLASTN (prot query vs nucl db)
KEGG GENES
Eukaryotes
Prokaryotes
Viruses
Favorite
organism code or category
KEGG MGENES
Environmental
Organismal
Favorite
samples
KEGG GENOME
Favorite
organism code or category
Microbial Reference Genes
Ocean (OM-RGC)
Human gut (IGC)
Ocean (MATOU)
EGENES
nr-nt (GenBank, EMBL and RefSeq)
dbEST
dbGSS
HTGs
dbSTS
RefSeq
Ribosomal Databases
SILVA (SSU, 16S/18S)
SILVA (LSU, 23S/28S)
PR2 (Protist Reference)
RDP (Prokaryotic 16S)
RDP (Fungal 28S)
EPD
Virus-Host Database
CDS
Genomes
Scoring matrix:
BLOSUM62
BLOSUM80
PAM30
PAM70
PAM250
(except for BLASTN)
Filter:
None
DUST in BLASTN, SEG in others
Output options:
Set the maximum number of database sequences to be reported:
Set the maximum number of alignments to be displayed:
Optional parameters:
(see
manual
for details)
E-value threshold
Alignment view:
Pairwise
master-slave with identities
master-slave without identities
flat master-slave with identities
flat master-slave without identities
Get ASN.1 for SeqAnnot
Get ASN.1 for the Blast Object
(except for BLASTX)
Additional options:
(delimited by whitespaces)
Feedback
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Kyoto University Bioinformatics Center