PathPred: Pathway Prediction server

PathPred	KEGG2

About PathPred

PathPred is a web-based server to predict plausible enzyme-catalyzed reaction pathways from a query compound using the information of RDM patterns and chemical structure alignments of substrate-product pairs. This server provides plausible reactions and transformed compounds, and displays all predicted reaction pathways in tree-shaped graph.

- PathPred help

Reference pathway:

Xenobiotics Biodegradation (Biodegradation of initial compound)
Biosynthesis of Secondary Metabolites (Biosynthesis of initial compound)

Enter initial compound: (in one of the four forms)

	MOL File Name
	MOL File Text
	SMILES	(Ex) Clc1c(Cl)c(Cl)ccc1Cl
	KEGG Compound ID	(Ex) C06594

Enter final compound: (optional)

	MOL File Name
	MOL File Text
	SMILES	(Ex) C(C(=O)O)O
	KEGG Compound ID	(Ex) C00160

Options:

	E-mail Address
	Simcomp Threshold	(0.1 - 0.9)
	Max Depth Level	steps

Feedback	KEGG	GenomeNet	Kyoto University Bioinformatics Center