Major hosts - Animal

[Animal|Plant|Other Eukaryotes|Bacteria|Archaea] One-click mode
9606   
Homo sapiens (1117 known viruses)
  • Viruses (1117)
    • dsDNA viruses, no RNA stage (306)
      • Adenoviridae (88)
      • Herpesvirales (16)
        • Herpesviridae (16)
          • Alphaherpesvirinae (7)
            • Simplexvirus (5)
              • 10317  
                Cercopithecine alphaherpesvirus 2
              • 10298  
                Human alphaherpesvirus 1
              • 10310  
                Human alphaherpesvirus 2
              • 10325  
                Macacine alphaherpesvirus 1
              • 340907 
                Papiine alphaherpesvirus 2
            • Varicellovirus (2)
              • 10335  
                Human alphaherpesvirus 3 (2)
                • 10338  
                  Human herpesvirus 3 strain Dumas
          • Betaherpesvirinae (6)
            • Cytomegalovirus (2)
              • 50292  
                Cercopithecine betaherpesvirus 5
              • 10359  
                Human betaherpesvirus 5
            • Roseolovirus (4)
              • 32603  
                Human betaherpesvirus 6A
              • 32604  
                Human betaherpesvirus 6B
              • 10372  
                Human betaherpesvirus 7
              • unclassified Roseolovirus (1)
          • Gammaherpesvirinae (3)
            • Lymphocryptovirus (2)
              • 10376  
                Human gammaherpesvirus 4 (2)
                • 12509  
                  Human herpesvirus 4 type 2
            • Rhadinovirus (1)
              • 37296  
                Human gammaherpesvirus 8
      • Papillomaviridae (171)
        • Alphapapillomavirus (69)
          • Alphapapillomavirus 1 (2)
            • 333763 
              Human papillomavirus type 32
            • 10590  
              Human papillomavirus type 42
          • Alphapapillomavirus 10 (7)
            • 10580  
              Human papillomavirus type 11
            • 10573  
              Human papillomavirus type 13
            • 10592  
              Human papillomavirus type 44
            • 37114  
              Human papillomavirus type 55
            • 31552  
              Human papillomavirus type 6
            • 37122  
              Human papillomavirus type 6a
            • 10600  
              Human papillomavirus type 6b
          • Alphapapillomavirus 11 (1)
            • 333764 
              Human papillomavirus type 34
          • Alphapapillomavirus 13 (1)
            • 1671798
              Human papillomavirus type 54
          • Alphapapillomavirus 14 (3)
            • 338326 
              Human papillomavirus type 106
            • 120686 
              Human papillomavirus type 71
            • 333769 
              Human papillomavirus type 90
          • Alphapapillomavirus 2 (8)
            • 333759 
              Human papillomavirus type 10
            • 720708 
              Human papillomavirus type 117
            • 673323 
              Human papillomavirus type 125
            • 37111  
              Human papillomavirus type 28
            • 37112  
              Human papillomavirus type 29
            • 10614  
              Human papillomavirus type 3
            • 260717 
              Human papillomavirus type 94
            • 1288116
              Human papillomavirus type XS2
          • 333767 
            Alphapapillomavirus 3 (11)
            • 338327 
              Human papillomavirus type 102
            • 735496 
              Human papillomavirus type 114
            • 37116  
              Human papillomavirus type 61
            • 334210 
              Human papillomavirus type 62
            • Human papillomavirus type 72 (1)
              • 1484958
                Human papillomavirus type 72b
            • 333771 
              Human papillomavirus type 81
            • 333772 
              Human papillomavirus type 83
            • 150546 
              Human papillomavirus type 84
            • 171370 
              Human papillomavirus type 86
            • 120381 
              Human papillomavirus type 87
          • 337043 
            Alphapapillomavirus 4 (8)
            • 333751 
              Human papillomavirus type 2
            • 333752 
              Human papillomavirus type 27 (2)
              • 325568 
                Human papillomavirus type 27b
            • 10584  
              Human papillomavirus type 2a
            • 333753 
              Human papillomavirus type 57 (3)
              • 186160 
                Human papillomavirus type 57b
              • 471358 
                Human papillomavirus type 57c
          • Alphapapillomavirus 5 (4)
            • 333762 
              Human papillomavirus type 26
            • 10595  
              Human papillomavirus type 51
            • 37121  
              Human papillomavirus type 69
            • 129724 
              Human papillomavirus type 82
          • Alphapapillomavirus 6 (4)
            • 10611  
              Human papillomavirus type 30
            • 333765 
              Human papillomavirus type 53
            • 10596  
              Human papillomavirus type 56
            • 37119  
              Human papillomavirus type 66
          • 337042 
            Alphapapillomavirus 7 (10)
            • 333761 
              Human papillomavirus type 18
            • 10588  
              Human papillomavirus type 39
            • 10593  
              Human papillomavirus type 45
            • 37115  
              Human papillomavirus type 59
            • 45240  
              Human papillomavirus type 68 (3)
              • 338322 
                Human papillomavirus type 68a
              • 940838 
                Human papillomavirus type 68b
            • 39457  
              Human papillomavirus type 70
            • 338324 
              Human papillomavirus type 97
          • Alphapapillomavirus 8 (3)
            • 10615  
              Human papillomavirus type 40
            • 10591  
              Human papillomavirus type 43
            • 10620  
              Human papillomavirus type 7
          • Alphapapillomavirus 9 (7)
            • 333760 
              Human papillomavirus type 16
            • 10585  
              Human papillomavirus type 31
            • 10586  
              Human papillomavirus type 33
            • 10587  
              Human papillomavirus type 35
            • 10618  
              Human papillomavirus type 52
            • 10598  
              Human papillomavirus type 58
            • 37120  
              Human papillomavirus type 67
        • Betapapillomavirus (42)
          • Betapapillomavirus 1 (18)
            • 587350 
              Human papillomavirus type 105
            • 927771 
              Human papillomavirus type 118
            • 10604  
              Human papillomavirus type 12
            • 765056 
              Human papillomavirus type 124
            • Human papillomavirus type 14 (1)
              • 31546  
                Human papillomavirus type 14D
            • 990302 
              Human papillomavirus type 152
            • 10608  
              Human papillomavirus type 19
            • 31547  
              Human papillomavirus type 20
            • 31548  
              Human papillomavirus type 21
            • 37956  
              Human papillomavirus type 24
            • 10609  
              Human papillomavirus type 25
            • 37957  
              Human papillomavirus type 36
            • 10594  
              Human papillomavirus type 47
            • 333923 
              Human papillomavirus type 5
            • 10599  
              Human papillomavirus type 5b
            • 10579  
              Human papillomavirus type 8
            • 587347 
              Human papillomavirus type 98
            • 587348 
              Human papillomavirus type 99
          • Betapapillomavirus 2 (19)
            • 587349 
              Human papillomavirus type 100
            • 518628 
              Human papillomavirus type 104 (2)
              • 563190 
                Human papillomavirus FA75/KI88-03
            • 427343 
              Human papillomavirus type 107
            • 518629 
              Human papillomavirus type 110
            • 518630 
              Human papillomavirus type 111
            • 587351 
              Human papillomavirus type 113
            • 765052 
              Human papillomavirus type 120
            • 765054 
              Human papillomavirus type 122
            • 10606  
              Human papillomavirus type 15
            • 743812 
              Human papillomavirus type 151
            • 1209820
              Human papillomavirus type 159
            • 10607  
              Human papillomavirus type 17
            • 37954  
              Human papillomavirus type 22
            • 37955  
              Human papillomavirus type 23
            • 37958  
              Human papillomavirus type 37
            • 37959  
              Human papillomavirus type 38 (2)
              • 334514 
                Human papillomavirus type 38b
            • 10621  
              Human papillomavirus type 9
          • Betapapillomavirus 3 (2)
            • 696746 
              Human papillomavirus type 115
            • 10616  
              Human papillomavirus type 49
          • Betapapillomavirus 4 (1)
            • 211787 
              Human papillomavirus type 92
          • Betapapillomavirus 5 (2)
            • 743811 
              Human papillomavirus type 150
            • 247269 
              Human papillomavirus type 96
        • Gammapapillomavirus (45)
          • Gammapapillomavirus 1 (2)
            • 10617  
              Human papillomavirus type 4
            • 28312  
              Human papillomavirus type 65
          • Gammapapillomavirus 10 (4)
            • 915429 
              Human papillomavirus type 121
            • 909329 
              Human papillomavirus type 130
            • 909332 
              Human papillomavirus type 133
            • 1070415
              Human papillomavirus type 142
          • Gammapapillomavirus 11 (1)
            • 1055684
              Human papillomavirus type 126
          • Gammapapillomavirus 12 (1)
            • 746832 
              Human papillomavirus type 127
          • Gammapapillomavirus 13 (1)
            • 931209 
              Human papillomavirus type 128
          • Gammapapillomavirus 14 (1)
            • 909330 
              Human papillomavirus type 131
          • Gammapapillomavirus 15 (2)
            • 1070408
              Human papillomavirus type 135
            • 1070419
              Human papillomavirus type 146
          • Gammapapillomavirus 16 (1)
            • 1070410
              Human papillomavirus type 137
          • Gammapapillomavirus 17 (1)
            • 1070417
              Human papillomavirus type 144
          • Gammapapillomavirus 18 (1)
            • 1248396
              Human papillomavirus type 156
          • Gammapapillomavirus 19 (1)
            • 1315259
              Human papillomavirus type 166
          • Gammapapillomavirus 2 (1)
            • 40538  
              Human papillomavirus type 48
          • Gammapapillomavirus 20 (1)
            • 1315262
              Human papillomavirus type 163
          • Gammapapillomavirus 3 (1)
            • 40539  
              Human papillomavirus type 50
          • Gammapapillomavirus 4 (1)
            • 40540  
              Human papillomavirus type 60
          • Gammapapillomavirus 5 (1)
            • 337054 
              Human papillomavirus type 88
          • Gammapapillomavirus 6 (3)
            • 915425 
              Human papillomavirus type 101
            • 338323 
              Human papillomavirus type 103
            • 565537 
              Human papillomavirus type 108
          • Gammapapillomavirus 7 (5)
            • 915426 
              Human papillomavirus type 109
            • 765055 
              Human papillomavirus type 123
            • 1070411
              Human papillomavirus type 138
            • 1070412
              Human papillomavirus type 139
            • 909328 
              Human papillomavirus type 149
          • Gammapapillomavirus 8 (3)
            • 915427 
              Human papillomavirus type 112
            • 765051 
              Human papillomavirus type 119
            • 1070420
              Human papillomavirus type 147
          • Gammapapillomavirus 9 (1)
          • unclassified Gammapapillomavirus (12)
            • Human papillomavirus 132-like viruses (2)
              • 909331 
                Human papillomavirus type 132
              • 942038 
                Human papillomavirus type 148
            • 1647924
              Human papillomavirus KC5
            • 931210 
              Human papillomavirus type 129
            • 909333 
              Human papillomavirus type 134
            • 1110710
              Human papillomavirus type 153
            • 1420545
              Human papillomavirus type 167
            • 1434986
              Human papillomavirus type 171
            • 1434987
              Human papillomavirus type 172
            • 1434988
              Human papillomavirus type 173
            • 1478160
              Human papillomavirus type 178
            • 1682340
              Human papillomavirus type 201
        • Mupapillomavirus (3)
          • 334203 
            Mupapillomavirus 1 (2)
            • 10583  
              Human papillomavirus type 1a
          • Mupapillomavirus 2 (1)
            • 28311  
              Human papillomavirus type 63
        • Nupapillomavirus (1)
          • Nupapillomavirus 1 (1)
            • 10589  
              Human papillomavirus type 41
        • unclassified Papillomaviridae (11)
          • Human papillomavirus types (11)
            • 10566  
              Human papillomavirus
            • 1070409
              Human papillomavirus type 136
            • 1070413
              Human papillomavirus type 140
            • 1070414
              Human papillomavirus type 141
            • 1070416
              Human papillomavirus type 143
            • 1070418
              Human papillomavirus type 145
            • 1195796
              Human papillomavirus type 154
            • 1165934
              Human papillomavirus type 155
            • 1472342
              Human papillomavirus type 179
            • 1542134
              Human papillomavirus type 197
            • 1297549
              Human papillomavirus type 78
      • Polyomaviridae (17)
        • Alphapolyomavirus (3)
        • Betapolyomavirus (3)
          • 1891762
            Human polyomavirus 1
          • Human polyomavirus 2 (1)
          • Human polyomavirus 4 (1)
        • Deltapolyomavirus (3)
        • unclassified Polyomaviridae (8)
      • Poxviridae (14)
        • Chordopoxvirinae (14)
          • Molluscipoxvirus (1)
            • Molluscum contagiosum virus (1)
              • 10280  
                Molluscum contagiosum virus subtype 1
          • Orthopoxvirus (9)
          • Parapoxvirus (1)
          • Yatapoxvirus (3)
    • ssDNA viruses (78)
      • Anelloviridae (31)
      • Circoviridae (20)
        • Circovirus (1)
          • unclassified Circovirus (1)
            • 1525173
              Human circovirus VS6600022
        • Gyrovirus (5)
        • unclassified Circoviridae (14)
      • Parvoviridae (23)
        • Parvovirinae (23)
          • Bocaparvovirus (11)
            • Primate bocaparvovirus 1 (2)
            • Primate bocaparvovirus 2 (3)
              • Human bocavirus 2 (1)
                • 1108927
                  Human bocavirus isolate SH3
              • 1511882
                Human bocavirus 2c PK
              • 1511883
                Human bocavirus 4 NI
            • unclassified Bocaparvovirus (6)
          • Dependoparvovirus (6)
            • Adeno-associated dependoparvovirus A (5)
              • Adeno-associated virus - 1 (1)
                • 68558  
                  Adeno-associated virus - 6
              • 10804  
                Adeno-associated virus - 2
              • 46350  
                Adeno-associated virus - 3 (2)
                • 68742  
                  Adeno-associated virus 3B
              • 57579  
                Adeno-associated virus - 4
            • Adeno-associated dependoparvovirus B (1)
              • 82300  
                Adeno-associated virus - 5
          • Erythroparvovirus (2)
            • Primate erythroparvovirus 1 (1)
            • unclassified Erythrovirus (1)
          • Tetraparvovirus (2)
            • Primate tetraparvovirus 1 (2)
          • unclassified Parvovirinae (2)
      • unclassified ssDNA viruses (4)
        • Circo-like virus-Brazil (2)
          • 1346815
            Circo-like virus-Brazil hs1
          • 1346816
            Circo-like virus-Brazil hs2
        • 1516081
          MSSI2.225 virus
        • 1862826
          unidentified circular ssDNA virus
    • dsRNA viruses (10)
      • Picobirnaviridae (1)
        • Picobirnavirus (1)
      • Reoviridae (9)
        • Sedoreovirinae (7)
          • Orbivirus (1)
          • Rotavirus (5)
            • 28875  
              Rotavirus A (2)
            • Rotavirus B (1)
            • 36427  
              Rotavirus C
            • Rotavirus H (1)
              • 335103 
                Adult diarrheal rotavirus strain J19
          • Seadornavirus (1)
            • Banna virus (1)
              • 649604 
                Banna virus strain JKT-6423
        • Spinareovirinae (2)
          • Coltivirus (1)
            • 46839  
              Colorado tick fever virus
          • Orthoreovirus (1)
            • Pteropine orthoreovirus (1)
    • ssRNA viruses (690)
      • ssRNA negative-strand viruses (108)
        • Arenaviridae (9)
          • Mammarenavirus (9)
        • Bunyaviridae (22)
          • Hantavirus (7)
          • Nairovirus (3)
            • 11593  
              Crimean-Congo hemorrhagic fever nairovirus
            • 11595  
              Dugbe nairovirus
            • Thiafora nairovirus (1)
          • Orthobunyavirus (3)
            • Bunyamwera orthobunyavirus (1)
            • California encephalitis orthobunyavirus (1)
            • Oropouche orthobunyavirus (1)
          • Phlebovirus (9)
            • Candiru phlebovirus (1)
            • Punta Toro phlebovirus (1)
            • Rift Valley fever phlebovirus (1)
              • 11588  
                Rift Valley fever virus
            • Sandfly fever Naples phlebovirus (2)
            • SFTS phlebovirus (1)
            • unclassified Phlebovirus (2)
              • 1216928
                Heartland virus
              • Sandfly fever Sicilian virus (1)
                • 688699 
                  Sandfly fever Turkey virus
            • Uukuniemi phlebovirus (1)
        • Mononegavirales (63)
          • Filoviridae (14)
            • Ebolavirus (8)
            • Marburgvirus (6)
              • 11269  
                Marburg marburgvirus (6)
                • 378830 
                  Lake Victoria marburgvirus - Angola2005
                • 378831 
                  Lake Victoria marburgvirus - DRC1999
                • 1126254
                  Lake Victoria marburgvirus - Leiden
                • 33727  
                  Marburg virus - Musoke, Kenya, 1980
                • 378809 
                  Ravn virus - Ravn, Kenya, 1987
          • Paramyxoviridae (31)
            • Avulavirus (1)
            • Henipavirus (2)
            • Morbillivirus (15)
              • 11234  
                Measles virus (15)
                • Measles virus genotypes and isolates (13)
                  • 170525 
                    Measles virus genotype D4
                  • 170528 
                    Measles virus genotype D8
                  • 1056492
                    Measles virus genotype G3
                  • 884096 
                    Measles virus strain MVi/Arizona.USA/11.08/2
                  • 884100 
                    Measles virus strain MVi/California.USA/16.03
                  • 884099 
                    Measles virus strain MVi/California.USA/8.04
                  • 884094 
                    Measles virus strain MVi/Florida.USA/19.09
                  • 884098 
                    Measles virus strain MVi/New Jersey.USA/45.05
                  • 884093 
                    Measles virus strain MVi/New York.USA/26.09/3
                  • 884101 
                    Measles virus strain MVi/Pennsylvania.USA/20.09
                  • 884097 
                    Measles virus strain MVi/Texas.USA/4.07
                  • 884095 
                    Measles virus strain MVi/Virginia.USA/15.09
                  • 1089795
                    Measles virus strain MVi/Washington.USA/18.08/1
                • Measles virus strain Edmonston (1)
                  • 70149  
                    Measles virus strain Edmonston-Zagreb
            • Respirovirus (3)
              • 12730  
                Human parainfluenza virus 1 (2)
                • 188538 
                  Human parainfluenza virus 1 strain Washington/1964
              • 11216  
                Human parainfluenza virus 3
            • Rubulavirus (9)
              • 11212  
                Human parainfluenza virus 2
              • Human parainfluenza virus 4 (2)
                • 11224  
                  Human parainfluenza virus 4a
                • 11226  
                  Human parainfluenza virus 4b
              • 11161  
                Mumps virus (3)
                • Mumps virus genotype A (1)
                  • 11168  
                    Mumps virus strain Jeryl Lynn
                • 1384672
                  Mumps virus genotype G
              • 11207  
                Parainfluenza virus 5
              • unclassified Rubulavirus (2)
            • unclassified Paramyxoviridae (1)
          • Pneumoviridae (5)
            • Metapneumovirus (1)
            • Orthopneumovirus (2)
              • 11250  
                Human respiratory syncytial virus (2)
                • Human respiratory syncytial virus B (1)
                  • 253182 
                    Human Respiratory syncytial virus 9320
            • Pneumovirus (2)
              • unclassified Pneumovirus (2)
                • 12814  
                  Respiratory syncytial virus (2)
                  • 1439707
                    Respiratory syncytial virus type A
          • Rhabdoviridae (13)
            • Lyssavirus (8)
              • 90961  
                Australian bat lyssavirus
              • 38767  
                Duvenhage lyssavirus
              • 57482  
                European bat lyssavirus 1
              • 57483  
                European bat lyssavirus 2
              • 38766  
                Lagos bat lyssavirus
              • 12538  
                Mokola lyssavirus
              • 11292  
                Rabies lyssavirus
              • unclassified Lyssavirus (1)
            • Vesiculovirus (5)
        • Orthomyxoviridae (14)
          • Influenzavirus A (11)
            • Influenza A virus (11)
              • H1N1 subtype (3)
                • 641501 
                  Influenza A virus (A/California/04/2009(H1N1))
                • 641809 
                  Influenza A virus (A/California/07/2009(H1N1))
                • 211044 
                  Influenza A virus (A/Puerto Rico/8/1934(H1N1))
              • H2N2 subtype (1)
                • 488241 
                  Influenza A virus (A/Korea/426/1968(H2N2))
              • H3N2 subtype (4)
                • 335341 
                  Influenza A virus (A/New York/392/2004(H3N2))
                • 370519 
                  Influenza A virus (A/New York/599/1996(H3N2))
                • 370522 
                  Influenza A virus (A/New York/602/1996(H3N2))
                • 370128 
                  Influenza A virus (A/Northern Territory/60/1968(H3N2))
              • H5N1 subtype (1)
                • 93838  
                  Influenza A virus (A/goose/Guangdong/1/1996(H5N1))
              • H7N9 subtype (1)
                • 1332244
                  Influenza A virus (A/Shanghai/02/2013(H7N9))
              • H9N2 subtype (1)
                • 130760 
                  Influenza A virus (A/Hong Kong/1073/99(H9N2))
          • Influenzavirus B (2)
            • Influenza B virus (2)
              • 518987 
                Influenza B virus (B/Lee/1940)
              • 98832  
                Influenza B virus (B/Memphis/12/97)
          • Influenzavirus C (1)
            • Influenza C virus (1)
              • 11553  
                Influenza C virus (C/Ann Arbor/1/50)
      • ssRNA positive-strand viruses, no DNA stage (582)
        • Astroviridae (21)
          • Mamastrovirus (12)
            • Mamastrovirus 1 (10)
              • 12456  
                Human astrovirus 1 (5)
                • 626160 
                  Human astrovirus 1 Beijing/128/2005/CHN
                • 626164 
                  Human astrovirus 1 Beijing/176/2006/CHN
                • 626180 
                  Human astrovirus 1 Beijing/291/2007/CHN
                • 626181 
                  Human astrovirus 1 Beijing/293/2007/CHN
              • 12701  
                Human astrovirus 2
              • 35300  
                Human astrovirus 4
              • 35741  
                Human astrovirus 5
              • 37130  
                Human astrovirus 6
              • 43358  
                Human astrovirus 8
            • unclassified Mamastrovirus (2)
              • Burkina Faso astrovirus (1)
              • 682382 
                HMO Astrovirus A
          • unclassified Astroviridae (9)
        • Caliciviridae (250)
          • Norovirus (243)
            • Norwalk virus (243)
              • 94433  
                Camberwell virus
              • 99565  
                Chiba virus
              • 122928 
                Norovirus GI (15)
                • Norovirus genogroup 1 isolates (3)
                  • 1529909
                    Norovirus GI/Hu/JP/2007/GI.P3_GI.3/Shimizu/KK2866
                  • 1529910
                    Norovirus GI/Hu/JP/2007/GI.P8_GI.8/Nagoya/KY531
                  • 1175308
                    Norovirus Hu/GI/10360/2010/VNM
                • Norovirus GI.1 (8)
                  • 1383577
                    Norovirus Hu/GI.1/8CKIIIc/1974/USA
                  • 1184498
                    Norovirus Hu/GI.1/8FIIa/1968/USA
                  • 1383578
                    Norovirus Hu/GI.1/8K/1979/USA
                  • 1383579
                    Norovirus Hu/GI.1/8MC/1978/USA
                  • 1383580
                    Norovirus Hu/GI.1/8McIII/1973/USA
                  • 1383581
                    Norovirus Hu/GI.1/8MoIIIL/1972/USA
                  • 1383582
                    Norovirus Hu/GI.1/8UIIIf/1973/USA
                  • 1383583
                    Norovirus Hu/GI.1/8W/1968/USA
                • Norovirus GI.2 (2)
                  • 1406147
                    Norovirus Hu/GI.2/Jingzhou/2013401/CHN
                  • 658397 
                    Norovirus Hu/GI.2/Leuven/2003/BEL
                • Norovirus GI.6 (1)
                  • 1173217
                    Norovirus Hu/GI.6/Kingston/ACT160D/2010/AU
              • Norovirus GII (150)
                • 82658  
                  Lordsdale virus
                • Norovirus GII isolates (45)
                  • 158465 
                    Human calicivirus Hu/NLV/GII/MD145-12/1987/US
                  • 1529911
                    Norovirus GII/Hu/JP/2000/GII.P12_GII.12/Saitama/KU16
                  • 1529912
                    Norovirus GII/Hu/JP/2001/GII.P12_GII.12/Saitama/T15
                  • 1529913
                    Norovirus GII/Hu/JP/2001/GII.P12_GII.12/Saitama/T18
                  • 1529914
                    Norovirus GII/Hu/JP/2001/GII.P22_GII.5/Saitama/T49
                  • 1529915
                    Norovirus GII/Hu/JP/2002/GII.P12_GII.13/Saitama/T80
                  • 1529916
                    Norovirus GII/Hu/JP/2002/GII.P16_GII.17/Saitama/T87
                  • 1529917
                    Norovirus GII/Hu/JP/2002/GII.P5_GII.5/Saitama/T52
                  • 1529918
                    Norovirus GII/Hu/JP/2007/GII.P15_GII.15/Sapporo/HK299
                  • 1529919
                    Norovirus GII/Hu/JP/2007/GII.P21_GII.21/Kawasaki/YO284
                  • 1529920
                    Norovirus GII/Hu/JP/2007/GII.P7_GII.14/Fukuoka/KK282
                  • 1529921
                    Norovirus GII/Hu/JP/2007/GII.P7_GII.14/Sendai/YG99
                  • 1529922
                    Norovirus GII/Hu/JP/2010/GII.P4_GII.4/Shimada/ASC96
                  • 1529923
                    Norovirus GII/Hu/JP/2010/GII.P7_GII.7/Musashimurayama/TAKAsanKimchi
                  • 1529924
                    Norovirus GII/Hu/JP/2011/GII/Yuzawa/Gira2HS
                  • 1529925
                    Norovirus GII/Hu/JP/2012/GII.Pe_GII.4_Sydney2012/Fukuyama/1
                  • 1529926
                    Norovirus GII/Hu/JP/2012/GII.Pe_GII.4_Sydney2012/Fukuyama/2
                  • 1529927
                    Norovirus GII/Hu/JP/2012/GII.Pe_GII.4_Sydney2012/Fukuyama/3
                  • 1529928
                    Norovirus GII/Hu/JP/2012/GII.Pe_GII.4_Sydney2012/Fukuyama/5
                  • 1529929
                    Norovirus GII/Hu/TW/2012/GII.Pe_GII.4_Sydney2012/Taipei/105
                  • 1529930
                    Norovirus GII/Hu/TW/2012/GII.Pe_GII.4_Sydney2012/Taipei/106
                  • 1529931
                    Norovirus GII/Hu/TW/2012/GII.Pe_GII.4_Sydney2012/Taipei/108
                  • 1529932
                    Norovirus GII/Hu/TW/2012/GII.Pe_GII.4_Sydney2012/Taipei/109
                  • 1183319
                    Norovirus Hu/GII.g-GII.12/Gunnedah/NSW895P/2010/AU
                  • 1183320
                    Norovirus Hu/GII.g-GII.12/Wahroonga/NSW004P/2009/AU
                  • 1175309
                    Norovirus Hu/GII/10002/2009/VNM
                  • 1175310
                    Norovirus Hu/GII/10003/2009/VNM
                  • 1175311
                    Norovirus Hu/GII/10012/2009/VNM
                  • 1175312
                    Norovirus Hu/GII/10037/2009/VNM
                  • 1291872
                    Norovirus Hu/GII/20469/2010/VNM
                  • 1291873
                    Norovirus Hu/GII/20477/2010/VNM
                  • 1486684
                    Norovirus Hu/GII/BG1C0004/2010/BGD
                  • 1486685
                    Norovirus Hu/GII/BG1C0066/2011/BGD
                  • 1486687
                    Norovirus Hu/GII/BG1C0204/2011/BGD
                  • 1486689
                    Norovirus Hu/GII/BG1C0241-33/2011/BGD
                  • 1486691
                    Norovirus Hu/GII/BG1C0270/2011/BGD
                  • 1486692
                    Norovirus Hu/GII/BG1C0282/2011/BGD
                  • 1486694
                    Norovirus Hu/GII/BG1C0317/2011/BGD
                  • 1486697
                    Norovirus Hu/GII/BG1C0405/2012/BGD
                  • 1336082
                    Norovirus Hu/GII/Seoul1055/KOR/2010
                  • 1336084
                    Norovirus Hu/GII/Seoul1072/KOR/2010
                  • 1336095
                    Norovirus Hu/GII/Seoul1282/KOR/2010
                  • 1336100
                    Norovirus Hu/GII/Seoul1367/KOR/2010
                  • 1336131
                    Norovirus Hu/GII/Seoul1488/KOR/2011
                  • 756495 
                    Norovirus Hu/GII/Shanghai/SH2/2008/CHN
                • Norovirus GII.12 (7)
                  • 1380573
                    Norovirus Hu/GII.12/CGMH38/2010/TW
                  • 1380574
                    Norovirus Hu/GII.12/CGMH39/2010/TW
                  • 1380575
                    Norovirus Hu/GII.12/CGMH40/2010/TW
                  • 1380576
                    Norovirus Hu/GII.12/CGMH41/2010/TW
                  • 1380577
                    Norovirus Hu/GII.12/CGMH42/2010/TW
                  • 1046049
                    Norovirus Hu/GII.12/HS206/2010/USA
                  • 934293 
                    Norovirus Hu/GII.12/HS210/2010/USA
                • Norovirus GII.14 (1)
                  • 748172 
                    Norovirus Hu/GII.14/8610/Saga/2008/JPN
                • 552592 
                  Norovirus GII.17
                • Norovirus GII.2 (1)
                  • 1458701
                    Norovirus Hu/GII.2/HS255/2011/USA
                • Norovirus GII.3 (3)
                  • 863240 
                    Norovirus Hu/GII.3/CBNU1/2006/KOR
                  • 1260941
                    Norovirus Hu/GII.3/HK71/1978/CHN
                  • 1406148
                    Norovirus Hu/GII.3/Jingzhou/2013402/CHN
                • Norovirus GII.4 (87)
                  • 1514999
                    Norovirus GII/Hu/HKG/2013/GII.4/CUHK-NS-141
                  • 1184496
                    Norovirus Hu/GII-4/CBNU2/2007/KR
                  • 1195613
                    Norovirus Hu/GII-4/CGMH01/2006/TW
                  • 1195614
                    Norovirus Hu/GII-4/CGMH02/2006/TW
                  • 1195615
                    Norovirus Hu/GII-4/CGMH03/2006/TW
                  • 1195616
                    Norovirus Hu/GII-4/CGMH04/2006/TW
                  • 1195617
                    Norovirus Hu/GII-4/CGMH05/2006/TW
                  • 1195618
                    Norovirus Hu/GII-4/CGMH06/2006/TW
                  • 1195619
                    Norovirus Hu/GII-4/CGMH07/2006/TW
                  • 1195620
                    Norovirus Hu/GII-4/CGMH08/2006/TW
                  • 1195621
                    Norovirus Hu/GII-4/CGMH09/2006/TW
                  • 1195622
                    Norovirus Hu/GII-4/CGMH10/2006/TW
                  • 1195623
                    Norovirus Hu/GII-4/CGMH11/2006/TW
                  • 1195624
                    Norovirus Hu/GII-4/CGMH12/2007/TW
                  • 1195625
                    Norovirus Hu/GII-4/CGMH13/2007/TW
                  • 1195626
                    Norovirus Hu/GII-4/CGMH14/2007/TW
                  • 1195627
                    Norovirus Hu/GII-4/CGMH15/2007/TW
                  • 1195628
                    Norovirus Hu/GII-4/CGMH16/2007/TW
                  • 1195629
                    Norovirus Hu/GII-4/CGMH17/2007/TW
                  • 1195630
                    Norovirus Hu/GII-4/CGMH18/2008/TW
                  • 1195631
                    Norovirus Hu/GII-4/CGMH19/2009/TW
                  • 1195632
                    Norovirus Hu/GII-4/CGMH20/2009/TW
                  • 1195633
                    Norovirus Hu/GII-4/CGMH21/2010/TW
                  • 1195634
                    Norovirus Hu/GII-4/CGMH22/2010/TW
                  • 1195635
                    Norovirus Hu/GII-4/CGMH23/2010/TW
                  • 1195636
                    Norovirus Hu/GII-4/CGMH24/2010/TW
                  • 1195637
                    Norovirus Hu/GII-4/CGMH25/2010/TW
                  • 1195638
                    Norovirus Hu/GII-4/CGMH26/2010/TW
                  • 1195639
                    Norovirus Hu/GII-4/CGMH27/2010/TW
                  • 1195640
                    Norovirus Hu/GII-4/CGMH28/2010/TW
                  • 587432 
                    Norovirus Hu/GII-4/CUK-3/2008/KR
                  • 1325533
                    Norovirus Hu/GII.4/20199/2009/VNM
                  • 1195791
                    Norovirus Hu/GII.4/5M/USA/2004
                  • 1241966
                    Norovirus Hu/GII.4/Berowra/NSW767L/2012/AU
                  • 1241967
                    Norovirus Hu/GII.4/Caringbah/NSW409G/2011/AU
                  • 660656 
                    Norovirus Hu/GII.4/CHDC2094/1974/US
                  • 660657 
                    Norovirus Hu/GII.4/CHDC3967/1988/US
                  • 660658 
                    Norovirus Hu/GII.4/CHDC4108/1987/US
                  • 660659 
                    Norovirus Hu/GII.4/CHDC4871/1977/US
                  • 1184497
                    Norovirus Hu/GII.4/CHDC5191/1974/USA
                  • 1241968
                    Norovirus Hu/GII.4/Doonside/NSW536I/2011/AU
                  • 1566828
                    Norovirus Hu/GII.4/gg-12-08-04/2012/KR
                  • 1379486
                    Norovirus Hu/GII.4/Guangzhou/GZ2010-L88/CHN/2011
                  • 1379487
                    Norovirus Hu/GII.4/Guangzhou/GZ2010-L91/CHN/2011
                  • 1282423
                    Norovirus Hu/GII.4/GZ2010-L26/Guangzhou/CHN/2010
                  • 1282425
                    Norovirus Hu/GII.4/GZ2010-L87/Guangzhou/CHN/2011
                  • 1262401
                    Norovirus Hu/GII.4/Hong Kong/CUHK3630/2012/CHN
                  • 1337425
                    Norovirus Hu/GII.4/Hong Kong/CUHK6080/2012/CHN
                  • 1268361
                    Norovirus Hu/GII.4/HS191/2004/USA
                  • 1458702
                    Norovirus Hu/GII.4/HS288/2012/USA
                  • 1458703
                    Norovirus Hu/GII.4/HS292/2012/USA
                  • 1458704
                    Norovirus Hu/GII.4/HS66/2001/USA
                  • 1241969
                    Norovirus Hu/GII.4/Jannali/NSW774M/2011/AU
                  • 880562 
                    Norovirus Hu/GII.4/JB-15/KOR/2008
                  • 1432852
                    Norovirus Hu/GII.4/Jiangsu1/2011/CHN
                  • 1432853
                    Norovirus Hu/GII.4/Jiangsu2/2012/CHN
                  • 1406149
                    Norovirus Hu/GII.4/Jingzhou/2013403/CHN
                  • 392172 
                    Norovirus Hu/GII.4/MD-2004/2004/US
                  • 1241970
                    Norovirus Hu/GII.4/Miranda/NSW850K/2011/AU
                  • 1133122
                    Norovirus Hu/GII.4/New Orleans/2010/USA
                  • 1383602
                    Norovirus Hu/GII.4/NIHIC1.13/2012/USA
                  • 1406809
                    Norovirus Hu/GII.4/NIHIC1.16/2012/USA
                  • 1406799
                    Norovirus Hu/GII.4/NIHIC11.3/2013/USA
                  • 1383591
                    Norovirus Hu/GII.4/NIHIC13/2011/USA
                  • 1383599
                    Norovirus Hu/GII.4/NIHIC17.1/2012/USA
                  • 1383601
                    Norovirus Hu/GII.4/NIHIC17.5/2012/USA
                  • 1406805
                    Norovirus Hu/GII.4/NIHIC17.6/2012/USA
                  • 1406801
                    Norovirus Hu/GII.4/NIHIC17.8/2013/USA
                  • 1406802
                    Norovirus Hu/GII.4/NIHIC17.9/2013/USA
                  • 1383590
                    Norovirus Hu/GII.4/NIHIC18.1/2012/USA
                  • 1406797
                    Norovirus Hu/GII.4/NIHIC2.2/2010/USA
                  • 1406798
                    Norovirus Hu/GII.4/NIHIC2.3/2010/USA
                  • 1383596
                    Norovirus Hu/GII.4/NIHIC27.1/2012/USA
                  • 1406800
                    Norovirus Hu/GII.4/NIHIC27.2/2012/USA
                  • 1383609
                    Norovirus Hu/GII.4/NIHIC28.4/2012/USA
                  • 1383606
                    Norovirus Hu/GII.4/NIHIC28.5/2012/USA
                  • 1406796
                    Norovirus Hu/GII.4/NIHIC35/2013/USA
                  • 1316726
                    Norovirus Hu/GII.4/Ohio/684/USA
                  • 1221622
                    Norovirus Hu/GII.4/Ohio/7G/2012/USA
                  • 1221623
                    Norovirus Hu/GII.4/Ohio/7I/2012/USA
                  • 1241971
                    Norovirus Hu/GII.4/Randwick/NSW882J/2011/AU
                  • 1241972
                    Norovirus Hu/GII.4/Randwick/NSW938K/2011/AU
                  • 1183312
                    Norovirus Hu/GII.4/Rockdale/NSW006D/2009/AU
                  • 1312076
                    Norovirus Hu/GII.4/Seoul/1071/2010/KOR
                  • 1498296
                    Norovirus Hu/GII.4/SGU-110421/KOR/2011
                  • 1241973
                    Norovirus Hu/GII.4/Sydney/NSW0514/2012/AU
                  • 1241974
                    Norovirus Hu/GII.4/Woonona/NSW3309/2012/AU
                • Norovirus GII.6 (2)
                  • 1282430
                    Norovirus Hu/GII.6/GZ2010-L96/Guangzhou/CHN/2011
                  • 1458705
                    Norovirus Hu/GII.6/HS245/2010/USA
                • Norovirus GII.9 (1)
                  • 1260944
                    Norovirus Hu/GII.6/CHDC4073/1984/USA
                • 52276  
                  Snow Mountain virus
              • 262897 
                Norovirus GIV (3)
                • Norovirus GIV.1 (2)
                  • 1338688
                    Norovirus Hu/GIV.1/CCDC GR1113-59/CHN/2011
                  • 1183318
                    Norovirus Hu/GIV.1/LakeMacquarie/NSW268O/2010/AU
              • Norovirus isolates (72)
                • 258453 
                  Human calicivirus NLV/GII/Langen1061/2002/DE
                • 1261195
                  Norovirus Hu/Norwalk/10034/2009/VNM
                • 1261196
                  Norovirus Hu/Norwalk/10051/2009/VNM
                • 1261197
                  Norovirus Hu/Norwalk/10054/2009/VNM
                • 1261198
                  Norovirus Hu/Norwalk/10062/2009/VNM
                • 1261199
                  Norovirus Hu/Norwalk/10074/2009/VNM
                • 1261200
                  Norovirus Hu/Norwalk/10075/2009/VNM
                • 1261201
                  Norovirus Hu/Norwalk/10078/2009/VNM
                • 1261202
                  Norovirus Hu/Norwalk/10079/2009/VNM
                • 1261203
                  Norovirus Hu/Norwalk/10110/2009/VNM
                • 1261204
                  Norovirus Hu/Norwalk/10114/2009/VNM
                • 1261205
                  Norovirus Hu/Norwalk/10116/2009/VNM
                • 1261206
                  Norovirus Hu/Norwalk/10129/2009/VNM
                • 1261207
                  Norovirus Hu/Norwalk/10136/2009/VNM
                • 1261208
                  Norovirus Hu/Norwalk/10137/2009/VNM
                • 1261209
                  Norovirus Hu/Norwalk/10145/2009/VNM
                • 1261210
                  Norovirus Hu/Norwalk/10148/2009/VNM
                • 1261211
                  Norovirus Hu/Norwalk/10158/2009/VNM
                • 1261212
                  Norovirus Hu/Norwalk/10160/2009/VNM
                • 1261213
                  Norovirus Hu/Norwalk/10162/2009/VNM
                • 1261214
                  Norovirus Hu/Norwalk/10163/2009/VNM
                • 1261215
                  Norovirus Hu/Norwalk/10169/2009/VNM
                • 1261216
                  Norovirus Hu/Norwalk/10173/2009/VNM
                • 1261217
                  Norovirus Hu/Norwalk/10176/2009/VNM
                • 1261218
                  Norovirus Hu/Norwalk/10177/2009/VNM
                • 1261219
                  Norovirus Hu/Norwalk/10179/2009/VNM
                • 1261220
                  Norovirus Hu/Norwalk/10182/2009/VNM
                • 1261221
                  Norovirus Hu/Norwalk/10183/2009/VNM
                • 1261222
                  Norovirus Hu/Norwalk/10194/2009/VNM
                • 1261223
                  Norovirus Hu/Norwalk/10199/2009/VNM
                • 1261224
                  Norovirus Hu/Norwalk/10203/2009/VNM
                • 1261225
                  Norovirus Hu/Norwalk/10204/2009/VNM
                • 1261226
                  Norovirus Hu/Norwalk/10222/2009/VNM
                • 1261227
                  Norovirus Hu/Norwalk/10223/2009/VNM
                • 1261228
                  Norovirus Hu/Norwalk/10235/2009/VNM
                • 1261229
                  Norovirus Hu/Norwalk/10236/2009/VNM
                • 1261230
                  Norovirus Hu/Norwalk/10238/2009/VNM
                • 1261231
                  Norovirus Hu/Norwalk/10247/2009/VNM
                • 1261232
                  Norovirus Hu/Norwalk/10255/2009/VNM
                • 1261233
                  Norovirus Hu/Norwalk/10285/2010/VNM
                • 1261234
                  Norovirus Hu/Norwalk/10296/2010/VNM
                • 1261235
                  Norovirus Hu/Norwalk/10313/2010/VNM
                • 1261236
                  Norovirus Hu/Norwalk/10325/2010/VNM
                • 1261237
                  Norovirus Hu/Norwalk/10328/2010/VNM
                • 1261238
                  Norovirus Hu/Norwalk/10368/2010/VNM
                • 1261239
                  Norovirus Hu/Norwalk/10378/2010/VNM
                • 1261240
                  Norovirus Hu/Norwalk/10386/2010/VNM
                • 1261241
                  Norovirus Hu/Norwalk/20008/2009/VNM
                • 1261242
                  Norovirus Hu/Norwalk/20010/2009/VNM
                • 1261243
                  Norovirus Hu/Norwalk/20014/2009/VNM
                • 1261244
                  Norovirus Hu/Norwalk/20016/2009/VNM
                • 1261245
                  Norovirus Hu/Norwalk/20019/2009/VNM
                • 1261246
                  Norovirus Hu/Norwalk/20033/2009/VNM
                • 1261247
                  Norovirus Hu/Norwalk/20035/2009/VNM
                • 1261248
                  Norovirus Hu/Norwalk/20044/2009/VNM
                • 1261249
                  Norovirus Hu/Norwalk/20047/2009/VNM
                • 1261250
                  Norovirus Hu/Norwalk/20066/2009/VNM
                • 1261251
                  Norovirus Hu/Norwalk/20067/2009/VNM
                • 1261252
                  Norovirus Hu/Norwalk/20069/2009/VNM
                • 1261253
                  Norovirus Hu/Norwalk/20092/2009/VNM
                • 1261254
                  Norovirus Hu/Norwalk/20093/2009/VNM
                • 1261255
                  Norovirus Hu/Norwalk/20094/2009/VNM
                • 1261256
                  Norovirus Hu/Norwalk/20118/2009/VNM
                • 1261257
                  Norovirus Hu/Norwalk/20122/2009/VNM
                • 1261258
                  Norovirus Hu/Norwalk/20123/2009/VNM
                • 1261259
                  Norovirus Hu/Norwalk/20128/2009/VNM
                • 1261260
                  Norovirus Hu/Norwalk/20135/2009/VNM
                • 1261261
                  Norovirus Hu/Norwalk/20139/2009/VNM
                • 1261262
                  Norovirus Hu/Norwalk/20140/2009/VNM
                • 1261263
                  Norovirus Hu/Norwalk/20142/2009/VNM
                • 756497 
                  Norovirus Hu/Shanghai/SH312/2009/CHN
                • 756496 
                  Norovirus Hu/Shanghai/SH5/2009/CHN
              • 95340  
                Norwalk-like virus
          • Sapovirus (7)
            • Sapporo virus (7)
              • Sapovirus GI (3)
                • Sapovirus GI.2 (1)
                  • 985691 
                    Sapovirus Hu/GI.2/BR-DF01/BRA/2009
                • 1346530
                  Sapovirus Hu/G1/BE-HPI01/DE/2012
                • 758863 
                  Sapovirus Hu/GI/Sapporo/MT-2010/1982
              • Sapovirus GII (2)
              • Sapovirus isolates (2)
                • 291175 
                  Sapovirus Hu/Dresden/pJG-Sap01/DE
                • 1280920
                  Sapovirus Hu/Nagoya/NGY-1/2012/JPN
        • Flaviviridae (54)
          • Flavivirus (27)
            • Dengue virus group (5)
            • Japanese encephalitis virus group (8)
            • Modoc virus group (1)
            • mosquito-borne viruses (1)
            • Ntaya virus group (1)
            • Rio Bravo virus group (1)
            • tick-borne encephalitis virus group (7)
              • 33743  
                Kyasanur forest disease virus (2)
                • 172148 
                  Alkhumra hemorrhagic fever virus
              • 11085  
                Langat virus
              • 11086  
                Louping ill virus
              • 12542  
                Omsk hemorrhagic fever virus
              • 11083  
                Powassan virus
              • Royal Farm virus (1)
            • Yellow fever virus group (2)
            • 64320  
              Zika virus
          • Hepacivirus (25)
            • 11103  
              Hepatitis C virus (25)
              • Hepatitis C virus genotype 1 (3)
                • 31646  
                  Hepatitis C virus subtype 1a
                • 31647  
                  Hepatitis C virus subtype 1b
                • 484894 
                  Hepatitis C virus subtype 1g
              • Hepatitis C virus genotype 2 (4)
                • 31649  
                  Hepatitis C virus subtype 2a
                • 31651  
                  Hepatitis C virus subtype 2c
                • 356466 
                  Hepatitis C virus subtype 2k
                • 1094901
                  Hepatitis C virus subtype 2m
              • 356114 
                Hepatitis C virus genotype 3 (4)
                • 356426 
                  Hepatitis C virus subtype 3a
                • 42792  
                  Hepatitis C virus subtype 3g
                • 1094895
                  Hepatitis C virus subtype 3i
              • 33745  
                Hepatitis C virus genotype 4 (9)
                • 31653  
                  Hepatitis C virus subtype 4a
                • 1094899
                  Hepatitis C virus subtype 4g
                • 1094898
                  Hepatitis C virus subtype 4L
                • 1094900
                  Hepatitis C virus subtype 4m
                • 693426 
                  Hepatitis C virus subtype 4n
                • 745709 
                  Hepatitis C virus subtype 4o
                • 693427 
                  Hepatitis C virus subtype 4r
                • 1208062
                  Hepatitis C virus subtype 4v
              • 33746  
                Hepatitis C virus genotype 5
              • 42182  
                Hepatitis C virus genotype 6 (2)
                • Hepatitis C virus subtype 6a (1)
                  • 356391 
                    Hepatitis C virus (isolate 6a33)
              • unclassified Hepatitis C virus (1)
                • 1208063
                  Hepatitis C virus subtype 2k/1b
          • Pegivirus (2)
            • Pegivirus A (1)
            • unclassified Pegivirus (1)
        • Hepeviridae (1)
          • Orthohepevirus (1)
            • Orthohepevirus A (1)
        • Nidovirales (16)
          • Coronaviridae (16)
            • Coronavirinae (16)
              • Alphacoronavirus (3)
                • 11137  
                  Human coronavirus 229E
                • 277944 
                  Human coronavirus NL63 (2)
                  • 270642 
                    Human group 1 coronavirus associated with pneumonia
              • Betacoronavirus (13)
                • Betacoronavirus 1 (3)
                  • Bovine coronavirus (2)
                    • 166124 
                      Human enteric coronavirus 4408 (2)
                      • 627439 
                        Human enteric coronavirus strain 4408
                  • 31631  
                    Human coronavirus OC43
                • 290028 
                  Human coronavirus HKU1
                • Severe acute respiratory syndrome-related coronavirus (4)
                • unclassified Betacoronavirus (5)
                  • 1335626
                    Middle East respiratory syndrome coronavirus (5)
                    • 1263720
                      Betacoronavirus England 1
                    • 1235996
                      Human betacoronavirus 2c EMC/2012
                    • 1298362
                      Human betacoronavirus 2c England-Qatar/2012
                    • 1306931
                      Human betacoronavirus 2c Jordan-N3/2012
        • Picornavirales (226)
        • Togaviridae (14)
          • Alphavirus (13)
            • 11020  
              Barmah Forest virus
            • EEEV complex (1)
              • 11021  
                Eastern equine encephalitis virus
            • SFV complex (7)
            • VEEV complex (1)
              • 11036  
                Venezuelan equine encephalitis virus
            • WEEV complex (3)
          • Rubivirus (1)
    • Retro-transcribing viruses (26)
      • Hepadnaviridae (8)
      • Retroviridae (18)
        • Orthoretrovirinae (12)
          • Deltaretrovirus (5)
            • Primate T-lymphotropic virus 1 (1)
              • 11908  
                Human T-lymphotropic virus 1
            • Primate T-lymphotropic virus 2 (2)
              • 11909  
                Human T-lymphotropic virus 2 (2)
                • 36368  
                  Human T-cell lymphotropic virus type 2b
            • Primate T-lymphotropic virus 3 (1)
              • 28332  
                Human T-lymphotropic virus 3
            • unclassified Deltaretrovirus (1)
              • 318279 
                Human T-lymphotropic virus 4
          • Gammaretrovirus (4)
            • Mammalian gammaretrovirus group (1)
              • Replication competent viruses (1)
                • Murine leukemia virus (1)
                  • unclassified Murine leukemia virus (1)
                    • 114654 
                      DG-75 Murine leukemia virus
            • unclassified Gammaretrovirus (3)
              • Murine leukemia-related retroviruses (3)
                • XMRV-related viruses (3)
                  • XMRV (3)
                    • 356663 
                      Xenotropic MuLV-related virus VP35
                    • 356664 
                      Xenotropic MuLV-related virus VP42
                    • 373193 
                      Xenotropic MuLV-related virus VP62
          • Lentivirus (3)
            • Primate lentivirus group (3)
              • 11676  
                Human immunodeficiency virus 1
              • 11709  
                Human immunodeficiency virus 2
              • unclassified Primate lentivirus group (1)
                • 12721  
                  Human immunodeficiency virus
        • Spumaretrovirinae (5)
          • Spumavirus (5)
            • 338079 
              African green monkey simian foamy virus
            • 338478 
              Macaque simian foamy virus
            • 11642  
              Simian foamy virus (3)
        • unclassified Retroviridae (1)
          • Human endogenous retroviruses (1)
            • Human endogenous retrovirus K (1)
              • 166122 
                Human endogenous retrovirus K113
    • Deltavirus (1)
    • unclassified viruses (6)
      • Genomoviridae (3)
        • Gemycircularvirus (3)
          • unclassified Gemycircularvirus (3)
            • 1862824
              Gemycircularvirus HV-GcV1
            • 1862825
              Gemycircularvirus HV-GcV2
            • 1707330
              Human plasma-associated gemycircularvirus
      • 1488574
        Human genital-associated circular DNA virus-1
      • 1930509
        Husavirus sp.
      • Smacovirusgroup (1)
9913   
Bos taurus (171 known viruses)
  • Viruses (171)
    • dsDNA viruses, no RNA stage (53)
      • Adenoviridae (8)
        • Atadenovirus (3)
          • 130499 
            Bovine adenovirus D (2)
          • unclassified Atadenovirus (1)
            • Bovine adenovirus E (1)
        • Mastadenovirus (5)
      • Herpesvirales (10)
        • Herpesviridae (10)
          • Alphaherpesvirinae (7)
            • Varicellovirus (7)
              • 10320  
                Bovine alphaherpesvirus 1 (6)
                • 79889  
                  Bovine herpesvirus type 1.1
                • Bovine herpesvirus type 1.2 (4)
                  • 1548190
                    Bovine herpesvirus type 1.2 strain B589
                  • 31519  
                    Bovine herpesvirus type 1.2 strain K22
                  • 1548191
                    Bovine herpesvirus type 1.2 strain SM023
                  • 1548192
                    Bovine herpesvirus type 1.2 strain SP1777
              • 35244  
                Bovine alphaherpesvirus 5
          • Gammaherpesvirinae (3)
            • Macavirus (2)
              • 35252  
                Alcelaphine gammaherpesvirus 1
              • 1504288
                Bovine gammaherpesvirus 6
            • Rhadinovirus (1)
              • 10385  
                Bovine gammaherpesvirus 4
      • Papillomaviridae (23)
        • Deltapapillomavirus (4)
          • 337052 
            Deltapapillomavirus 4 (4)
            • 10559  
              Bovine papillomavirus type 1
            • 1232138
              Bovine papillomavirus type 13
            • 10560  
              Bovine papillomavirus type 2
        • Dyoxipapillomavirus (1)
          • Dyoxipapillomavirus 1 (1)
            • 1001533
              Bos taurus papillomavirus 7
        • Epsilonpapillomavirus (2)
          • 40537  
            Epsilonpapillomavirus 1 (2)
        • unclassified Papillomaviridae (8)
          • non-primate mammal papillomaviruses (8)
            • 1887213
              Bos taurus papillomavirus 13
            • 1887214
              Bos taurus papillomavirus 16
            • 1887215
              Bos taurus papillomavirus 17
            • 1887216
              Bos taurus papillomavirus 18
            • 1887217
              Bos taurus papillomavirus 19
            • 1887218
              Bos taurus papillomavirus 20
            • 1887219
              Bos taurus papillomavirus 21
            • 10571  
              Bovine papillomavirus
        • Xipapillomavirus (8)
          • 10561  
            Xipapillomavirus 1 (7)
            • 453461 
              Bovine papillomavirus type 10 (2)
              • 508418 
                Bovine papillomavirus BAA5-Japan
            • 714200 
              Bovine papillomavirus type 11
            • 10562  
              Bovine papillomavirus type 4
            • 10563  
              Bovine papillomavirus type 6
            • 453460 
              Bovine papillomavirus type 9
          • Xipapillomavirus 2 (1)
            • 1070324
              Bos taurus papillomavirus 12
      • Polyomaviridae (6)
        • unassigned Polyomaviridae (2)
        • unclassified Polyomaviridae (4)
      • Poxviridae (6)
        • Chordopoxvirinae (6)
          • Capripoxvirus (1)
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              • 376849 
                Lumpy skin disease virus NI-2490
          • Orthopoxvirus (3)
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    • ssDNA viruses (10)
      • Circoviridae (3)
        • Circovirus (1)
          • Porcine circovirus 2 (1)
        • unclassified Circoviridae (2)
          • 1548712
            Circoviridae SFBeef
          • suggested genus Cyclovirus (1)
            • Cyclovirus PKgoat21/PAK/2009 (1)
              • 942032 
                Cyclovirus PKbeef23/PAK/2009
      • Parvoviridae (5)
        • Parvovirinae (5)
          • Bocaparvovirus (3)
            • unclassified Bocaparvovirus (1)
              • 1864484
                Ungulate bocaparvovirus 6
            • Ungulate bocaparvovirus 1 (2)
          • Copiparvovirus (1)
            • Ungulate copiparvovirus 1 (1)
          • Protoparvovirus (1)
            • Ungulate protoparvovirus 1 (1)
      • unclassified ssDNA viruses (2)
    • dsRNA viruses (11)
      • Reoviridae (11)
        • Sedoreovirinae (11)
          • Orbivirus (10)
            • 40051  
              Bluetongue virus
            • Epizootic hemorrhagic disease virus (8)
              • Epizootic hemorrhagic disease virus 1 (1)
                • 449133 
                  Epizootic hemorrhagic disease virus (serotype 1 / strain New Jersey)
              • Epizootic hemorrhagic disease virus 2 (2)
                • 449134 
                  Epizootic hemorrhagic disease virus (serotype 2 / strain 439)
                • 449142 
                  Epizootic hemorrhagic disease virus (serotype 2 / strain Ibaraki)
              • Epizootic hemorrhagic disease virus 5 (1)
                • 449137 
                  Epizootic hemorrhagic disease virus (serotype 5 / strain CSIRO 157)
              • Epizootic hemorrhagic disease virus 6 (2)
                • 449141 
                  Epizootic hemorrhagic disease virus (serotype 6 / strain 318)
                • 449138 
                  Epizootic hemorrhagic disease virus (serotype 6 / strain CSIRO 753)
              • Epizootic hemorrhagic disease virus 7 (1)
                • 449139 
                  Epizootic hemorrhagic disease virus (serotype 7 / strain CSIRO 775)
              • Epizootic hemorrhagic disease virus 8 (1)
                • 449140 
                  Epizootic hemorrhagic disease virus (serotype 8 / strain CPR 3961A)
            • 40059  
              Palyam virus
          • Seadornavirus (1)
            • Banna virus (1)
              • 649604 
                Banna virus strain JKT-6423
    • ssRNA viruses (83)
      • ssRNA negative-strand viruses (24)
        • Bunyaviridae (6)
          • Nairovirus (1)
            • 11593  
              Crimean-Congo hemorrhagic fever nairovirus
          • Orthobunyavirus (4)
          • Phlebovirus (1)
            • Rift Valley fever phlebovirus (1)
              • 11588  
                Rift Valley fever virus
        • Mononegavirales (17)
          • Bornaviridae (1)
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              • Mammalian 2 bornavirus (1)
                • 1885248
                  Variegated squirrel bornavirus 1
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            • Morbillivirus (2)
              • 11241  
                Rinderpest virus (2)
                • 11242  
                  Rinderpest virus (strain Kabete O)
            • Respirovirus (1)
              • 11215  
                Bovine parainfluenza virus 3
          • Pneumoviridae (2)
            • Orthopneumovirus (2)
              • 11246  
                Bovine respiratory syncytial virus (2)
                • 11247  
                  Bovine respiratory syncytial virus ATCC51908
          • Rhabdoviridae (11)
            • Ephemerovirus (5)
            • Lyssavirus (1)
            • Tibrovirus (1)
            • Vesiculovirus (4)
              • 50713  
                Cocal virus
              • 198833 
                Vesicular stomatitis Alagoas virus
              • 11277  
                Vesicular stomatitis Indiana virus
              • 11280  
                Vesicular stomatitis New Jersey virus
        • Orthomyxoviridae (1)
          • unclassified Orthomyxoviridae (1)
            • Influenzavirus D (1)
              • Influenza D virus (1)
                • 1542973
                  Influenza D virus (D/bovine/France/2986/2012)
      • ssRNA positive-strand viruses, no DNA stage (59)
        • Astroviridae (6)
          • Mamastrovirus (5)
            • unclassified Mamastrovirus (5)
          • unclassified Astroviridae (1)
        • Caliciviridae (6)
          • Nebovirus (4)
            • Newbury-1 virus (2)
            • unclassified Nebovirus (2)
              • 1812179
                Bovine calicivirus strain Kirklareli
              • 1212483
                Nebovirus Bo/M3641/2011/HUN
          • Norovirus (1)
            • Norwalk virus (1)
          • unclassified Caliciviridae (1)
        • Flaviviridae (12)
          • Flavivirus (2)
            • Japanese encephalitis virus group (1)
              • 11072  
                Japanese encephalitis virus
            • tick-borne encephalitis virus group (1)
          • Hepacivirus (1)
            • unclassified Hepacivirus (1)
          • Pestivirus (9)
            • 358764 
              Border disease virus
            • 11099  
              Bovine viral diarrhea virus 1 (3)
              • Bovine viral diarrhea virus isolates and strains (1)
                • 82470  
                  Bovine viral diarrhea virus strain Oregon C24V
              • 981676 
                Bovine viral diarrhea virus type 1b
            • 54315  
              Bovine viral diarrhea virus 2 (2)
              • 60869  
                Bovine viral diarrhea virus 2 C413
            • unclassified Pestivirus (3)
              • 381707 
                Bovine viral diarrhea virus 3 (2)
                • 402584 
                  Bovine viral diarrhea virus 3 Th/04_KhonKaen
              • Pestivirus Giraffe-1 (1)
        • Nidovirales (14)
          • Coronaviridae (13)
            • Coronavirinae (12)
              • Betacoronavirus (12)
                • Betacoronavirus 1 (12)
                  • 11128  
                    Bovine coronavirus (12)
                    • 422220 
                      Bovine coronavirus E-AH187 (2)
                      • 454963 
                        Bovine coronavirus E-AH187-TC
                    • 422217 
                      Bovine coronavirus E-AH65 (2)
                      • 422218 
                        Bovine coronavirus E-AH65-TC
                    • 422216 
                      Bovine coronavirus E-DB2-TC
                    • 422219 
                      Bovine coronavirus R-AH187
                    • 422214 
                      Bovine coronavirus R-AH65 (2)
                      • 422215 
                        Bovine coronavirus R-AH65-TC
                    • 502108 
                      Bovine respiratory coronavirus AH187
                    • 502105 
                      Bovine respiratory coronavirus bovine/US/OH-440-TC/1996
                    • Human enteric coronavirus 4408 (1)
                      • 627439 
                        Human enteric coronavirus strain 4408
            • Torovirinae (1)
              • Torovirus (1)
                • Bovine torovirus (1)
          • unclassified Nidovirales (1)
        • Picornavirales (20)
          • Picornaviridae (20)
            • Aphthovirus (10)
              • 693066 
                Bovine rhinitis B virus
              • Foot-and-mouth disease virus (9)
                • 12111  
                  Foot-and-mouth disease virus - type A
                • 110195 
                  Foot-and-mouth disease virus - type Asia 1
                • Foot-and-mouth disease virus - type C (1)
                  • 12121  
                    Foot-and-mouth disease virus C1
                • 12118  
                  Foot-and-mouth disease virus - type O (6)
                  • 461292 
                    Foot-and-mouth disease virus O/UKG/4014/2001
                  • 461293 
                    Foot-and-mouth disease virus O/UKG/4998/2001
                  • 461295 
                    Foot-and-mouth disease virus O/UKG/5470/2001
                  • 461289 
                    Foot-and-mouth disease virus O/UKG/7039/2001
                  • 461290 
                    Foot-and-mouth disease virus O/UKG/9161/2001
            • Enterovirus (5)
            • Hunnivirus (1)
              • Hunnivirus A (1)
            • Kobuvirus (3)
              • unclassified Kobuvirus (3)
                • 1476554
                  Bovine kobuvirus
                • 1659220
                  Kobuvirus cattle/Kagoshima-1-22-KoV/2014/JPN
                • 1659219
                  Kobuvirus cattle/Kagoshima-2-24-KoV/2015/JPN
            • unclassified Picornaviridae (1)
        • Togaviridae (1)
          • Alphavirus (1)
            • VEEV complex (1)
              • 11036  
                Venezuelan equine encephalitis virus
    • Retro-transcribing viruses (4)
      • Retroviridae (4)
        • Orthoretrovirinae (3)
          • Betaretrovirus (1)
            • unclassified Betaretrovirus (1)
          • Deltaretrovirus (1)
          • Lentivirus (1)
            • Bovine lentivirus group (1)
              • 11657  
                Bovine immunodeficiency virus
        • Spumaretrovirinae (1)
          • Spumavirus (1)
    • unclassified viruses (10)
      • 1843764
        Bovine faeces associated circular DNA virus 1
      • 1843765
        Bovine faeces associated circular DNA virus 2
      • Genomoviridae (1)
        • Gemycircularvirus (1)
          • unclassified Gemycircularvirus (1)
            • 1843742
              Faeces associated gemycircularvirus 22
      • 1843772
        Porcine faeces associated circular DNA molecule-1
      • Smacovirusgroup (6)
        • 1843749
          Bovine faeces associated smacovirus 1
        • 1843750
          Bovine faeces associated smacovirus 2
        • 1843751
          Bovine faeces associated smacovirus 3
        • 1843752
          Bovine faeces associated smacovirus 4
        • 1843753
          Bovine faeces associated smacovirus 5
        • 1843754
          Bovine faeces associated smacovirus 6
9823   
Sus scrofa (150 known viruses)
  • Viruses (150)
    • dsDNA viruses, no RNA stage (10)
      • Adenoviridae (2)
        • Mastadenovirus (2)
          • Porcine mastadenovirus A (1)
          • 130371 
            Porcine mastadenovirus C
      • Asfarviridae (4)
        • Asfivirus (4)
          • 10497  
            African swine fever virus (4)
            • 443876 
              African swine fever virus Benin 97/1
            • 686262 
              African swine fever virus E75
            • 443878 
              African swine fever virus OURT 88/3
      • Herpesvirales (2)
        • Herpesviridae (2)
          • Alphaherpesvirinae (1)
            • Varicellovirus (1)
              • 10345  
                Suid alphaherpesvirus 1
          • Betaherpesvirinae (1)
            • unassigned Betaherpesvirinae (1)
      • Poxviridae (2)
        • Chordopoxvirinae (2)
          • Orthopoxvirus (1)
            • Vaccinia virus (1)
          • Suipoxvirus (1)
    • ssDNA viruses (54)
      • Anelloviridae (5)
        • Iotatorquevirus (3)
          • 687386 
            Torque teno sus virus 1a
          • 687387 
            Torque teno sus virus 1b
          • unclassified Iotatorquevirus (1)
            • 742012 
              Torque teno sus virus SH0822/2008
        • Kappatorquevirus (2)
          • 1218488
            Torque teno sus virus k2 (2)
            • 1239832
              Torque teno sus virus k2b
      • Circoviridae (26)
        • Circovirus (19)
          • 133704 
            Porcine circovirus 1
          • 85708  
            Porcine circovirus 2 (14)
            • 479166 
              Porcine circovirus 2 P0404c/03
            • 479167 
              Porcine circovirus 2 R0255/209/03
            • 479168 
              Porcine circovirus 2 S0255/210/03
            • 348291 
              Porcine circovirus 2 strain SD3
            • 348292 
              Porcine circovirus 2 strain SD5
            • 348293 
              Porcine circovirus 2 strain SD6
            • 479169 
              Porcine circovirus 2 T0181c/03
            • 479170 
              Porcine circovirus 2 U0168/03
            • 479171 
              Porcine circovirus 2 Z0161b/03
            • 85709  
              Porcine circovirus type 2-B
            • 85543  
              Porcine circovirus type 2-C
            • 86385  
              Porcine circovirus type 2-D
            • 85544  
              Porcine circovirus type 2-E
          • unclassified Circovirus (4)
        • unclassified Circoviridae (7)
          • Po-Circo-like virus (2)
          • 1105385
            Po-Circo-like virus 41
          • 1105386
            Po-Circo-like virus 51
          • 1475062
            Porcine stool-associated circular virus 4
          • 1475063
            Porcine stool-associated circular virus 5
          • suggested genus Cyclovirus (1)
            • Cyclovirus VN (1)
      • Parvoviridae (13)
        • Parvovirinae (13)
          • Bocaparvovirus (8)
            • unclassified Bocaparvovirus (2)
              • 1165907
                Porcine bocavirus
              • Porcine bocavirus 5 (1)
                • 1131622
                  Porcine bocavirus 5/JS677
            • Ungulate bocaparvovirus 2 (2)
              • Porcine bocavirus 1 (1)
                • 795694 
                  Porcine bocavirus 1 pig/ZJD/China/2006
              • Porcine bocavirus 2 (1)
                • 795695 
                  Porcine bocavirus 2 pig/ZJD/China/2006
            • Ungulate bocaparvovirus 5 (4)
          • Copiparvovirus (1)
            • Ungulate copiparvovirus 2 (1)
          • Protoparvovirus (3)
            • unclassified Protoparvovirus (2)
            • Ungulate protoparvovirus 1 (1)
          • unclassified Parvovirinae (1)
      • unclassified ssDNA viruses (10)
        • 1249501
          Pig stool associated circular ssDNA virus (2)
          • 1114942
            Pig stool associated circular ssDNA virus GER2011
        • 1537164
          Porcine stool-associated circular virus 1
        • 1328031
          Porcine stool-associated circular virus 2
        • 1328032
          Porcine stool-associated circular virus 3
        • 1537165
          Porcine stool-associated circular virus 6
        • 1537166
          Porcine stool-associated circular virus 7
        • 1537167
          Porcine stool-associated circular virus 8
        • 1537168
          Porcine stool-associated circular virus 9
        • 1488557
          PoSCV Kor J481
    • dsRNA viruses (3)
      • Picobirnaviridae (1)
        • Picobirnavirus (1)
          • unclassified Picobirnavirus (1)
      • Reoviridae (2)
        • Sedoreovirinae (2)
          • Orbivirus (1)
          • Seadornavirus (1)
            • Banna virus (1)
              • 649604 
                Banna virus strain JKT-6423
    • ssRNA viruses (77)
      • ssRNA negative-strand viruses (12)
        • Mononegavirales (8)
          • Filoviridae (2)
            • Ebolavirus (2)
          • Paramyxoviridae (4)
            • Henipavirus (1)
            • Respirovirus (1)
              • unclassified Respirovirus (1)
                • 505220 
                  Swine parainfluenza virus 3
            • Rubulavirus (2)
              • 53179  
                Porcine rubulavirus
              • unclassified Rubulavirus (1)
          • Rhabdoviridae (2)
            • Lyssavirus (1)
            • Vesiculovirus (1)
              • 11277  
                Vesicular stomatitis Indiana virus
        • Orthomyxoviridae (4)
          • Influenzavirus A (3)
            • Influenza A virus (3)
              • H1N1 subtype (2)
                • 641501 
                  Influenza A virus (A/California/04/2009(H1N1))
                • 211044 
                  Influenza A virus (A/Puerto Rico/8/1934(H1N1))
              • H5N1 subtype (1)
                • 93838  
                  Influenza A virus (A/goose/Guangdong/1/1996(H5N1))
          • Influenzavirus C (1)
            • Influenza C virus (1)
              • 11553  
                Influenza C virus (C/Ann Arbor/1/50)
      • ssRNA positive-strand viruses, no DNA stage (65)
        • Astroviridae (6)
          • Mamastrovirus (5)
            • 1239567
              Mamastrovirus 3
            • unclassified Mamastrovirus (4)
          • unclassified Astroviridae (1)
        • Caliciviridae (9)
          • Norovirus (1)
            • Norwalk virus (1)
              • Norovirus GII (1)
                • Norovirus GII isolates (1)
                  • 1088689
                    Norovirus pig/GII/Ch6/China/2009
          • Sapovirus (4)
            • Sapporo virus (4)
              • Sapovirus GIII (1)
              • Sapovirus GVI (1)
                • 1471436
                  Sapovirus pig/GVI/OH-JJ674/2000/US
              • Sapovirus isolates (2)
                • 1401324
                  Sapovirus pig/Gansu/CH430/2012/CHN
                • 638664 
                  Sapovirus pig/sav1/2008/CHN
          • unclassified Caliciviridae (3)
            • St-Valerien swine virus (3)
          • Vesivirus (1)
            • 35612  
              Vesicular exanthema of swine virus
        • Flaviviridae (8)
          • Flavivirus (2)
            • Japanese encephalitis virus group (1)
              • 11072  
                Japanese encephalitis virus
            • tick-borne encephalitis virus group (1)
          • Pestivirus (6)
            • 11096  
              Classical swine fever virus (4)
              • 358769 
                Classical swine fever virus - Alfort/187
              • 358812 
                Classical swine fever virus - C
              • Classical swine fever virus isolates (1)
                • 149596 
                  Classical swine fever virus strain Eystrup
            • unclassified Pestivirus (2)
              • Atypical porcine pestivirus (1)
                • 1873455
                  Atypical porcine pestivirus 1
              • 412969 
                Porcine pestivirus isolate Bungowannah
        • Hepeviridae (1)
          • Orthohepevirus (1)
            • Orthohepevirus A (1)
              • Hepatitis E virus (1)
                • 63421  
                  Swine hepatitis E virus
        • Nidovirales (16)
          • Arteriviridae (2)
            • Arterivirus (2)
              • 28344  
                Porcine reproductive and respiratory syndrome virus (2)
          • Coronaviridae (14)
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              • Alphacoronavirus (4)
                • Alphacoronavirus 1 (2)
                  • 11149  
                    Transmissible gastroenteritis virus (2)
                    • Porcine respiratory coronavirus (1)
                • 28295  
                  Porcine epidemic diarrhea virus
                • unclassified Alphacoronavirus (1)
                  • 1766554
                    Swine enteric coronavirus
              • Deltacoronavirus (9)
                • unclassified Deltacoronavirus (9)
                  • 1159905
                    Porcine coronavirus HKU15 (9)
                    • 1465644
                      Deltacoronavirus PDCoV/USA/Illinois121/2014
                    • 1477411
                      Deltacoronavirus PDCoV/USA/Illinois133/2014
                    • 1477412
                      Deltacoronavirus PDCoV/USA/Illinois134/2014
                    • 1477413
                      Deltacoronavirus PDCoV/USA/Illinois136/2014
                    • 1477414
                      Deltacoronavirus PDCoV/USA/Ohio137/2014
                    • 1476502
                      Porcine deltacoronavirus 8734/USA-IA/2014
                    • 1559519
                      Porcine deltacoronavirus KNU14-04
                    • 1525854
                      Swine deltacoronavirus OhioCVM1/2014
            • Torovirinae (1)
              • Torovirus (1)
        • Nodaviridae (1)
          • Alphanodavirus (1)
        • Picornavirales (23)
          • Picornaviridae (20)
            • Aphthovirus (5)
              • Foot-and-mouth disease virus (5)
                • Foot-and-mouth disease virus - type C (1)
                  • 12121  
                    Foot-and-mouth disease virus C1
                • 12118  
                  Foot-and-mouth disease virus - type O (2)
                  • 290057 
                    Foot-and-mouth disease virus O/ES/2001
                • 12122  
                  Foot-and-mouth disease virus - type SAT 1
                • 35292  
                  Foot-and-mouth disease virus - type SAT 2
            • Cardiovirus (1)
              • Cardiovirus A (1)
                • 12104  
                  Encephalomyocarditis virus
            • Enterovirus (4)
              • Enterovirus B (2)
                • 12075  
                  Swine vesicular disease virus (2)
                  • 12076  
                    Swine vesicular disease virus (STRAIN H/3 '76)
              • 106966 
                Enterovirus G (2)
            • Kobuvirus (4)
              • Aichivirus C (4)
                • 1156769
                  Porcine kobuvirus (3)
                  • 1136133
                    Porcine kobuvirus SH-W-CHN/2010/China
                  • 703582 
                    Porcine kobuvirus swine/K-30-HUN/2008/HUN
                • 569195 
                  Porcine kobuvirus swine/S-1-HUN/2007/Hungary
            • Pasivirus (1)
              • Pasivirus A (1)
            • Sapelovirus (2)
            • Senecavirus (1)
            • Teschovirus (2)
          • unclassified Picornavirales (3)
        • Togaviridae (1)
          • Alphavirus (1)
            • SFV complex (1)
              • Getah virus (1)
    • Retro-transcribing viruses (3)
      • Retroviridae (3)
        • Orthoretrovirinae (3)
          • Gammaretrovirus (3)
            • Mammalian gammaretrovirus group (3)
              • Replication competent viruses (3)
                • Porcine type-C oncovirus (3)
                  • Porcine endogenous retrovirus (3)
                    • 194958 
                      Porcine endogenous retrovirus A
                    • 194959 
                      Porcine endogenous retrovirus B
                    • 168238 
                      Porcine endogenous retrovirus E
    • unclassified viruses (3)
      • Genomoviridae (2)
        • Gemycircularvirus (2)
          • unclassified Gemycircularvirus (2)
            • 1843739
              Faeces associated gemycircularvirus 19
            • 1391031
              Faeces associated gemycircularvirus 2
      • 1930510
        Posavirus sp.
10090  
Mus musculus (112 known viruses)
  • Viruses (112)
    • dsDNA viruses, no RNA stage (17)
      • Adenoviridae (2)
        • Mastadenovirus (2)
          • 129956 
            Murine mastadenovirus A
          • Murine mastadenovirus B (1)
      • Herpesvirales (2)
        • Herpesviridae (2)
          • Betaherpesvirinae (2)
            • Muromegalovirus (2)
              • 10366  
                Murid betaherpesvirus 1 (2)
                • 69156  
                  Murine cytomegalovirus (strain K181)
      • Papillomaviridae (1)
        • Pipapillomavirus (1)
          • Pipapillomavirus 2 (1)
            • 763552 
              Mus musculus papillomavirus type 1
      • Polyomaviridae (3)
        • Alphapolyomavirus (2)
          • Mus musculus polyomavirus 1 (2)
            • 10636  
              Murine polyomavirus strain A2
            • 179241 
              Murine polyomavirus strain BG
        • Betapolyomavirus (1)
          • 1891770
            Mus musculus polyomavirus 2
      • Poxviridae (9)
        • Chordopoxvirinae (7)
          • Orthopoxvirus (7)
            • 10243  
              Cowpox virus
            • 12643  
              Ectromelia virus (2)
            • 10244  
              Monkeypox virus (2)
              • 619591 
                Monkeypox virus Zaire-96-I-16
            • unclassified Orthopoxvirus (1)
            • Vaccinia virus (1)
        • unclassified Poxviridae (2)
    • ssDNA viruses (9)
      • Circoviridae (1)
        • unclassified Circoviridae (1)
          • suggested genus Cyclovirus (1)
      • Parvoviridae (8)
        • Parvovirinae (8)
          • Protoparvovirus (8)
    • dsRNA viruses (2)
      • Reoviridae (2)
        • Sedoreovirinae (2)
          • Orbivirus (1)
          • Seadornavirus (1)
    • ssRNA viruses (69)
      • ssRNA negative-strand viruses (10)
        • Arenaviridae (1)
          • Mammarenavirus (1)
            • 11623  
              Lymphocytic choriomeningitis mammarenavirus
        • Mononegavirales (9)
          • Nyamiviridae (1)
            • Nyavirus (1)
          • Paramyxoviridae (2)
            • Respirovirus (1)
            • unclassified Paramyxoviridae (1)
          • Pneumoviridae (2)
            • Orthopneumovirus (2)
              • Murine pneumonia virus (2)
                • 296738 
                  Pneumonia virus of mice 15
                • 270473 
                  Pneumonia virus of mice J3666
          • Rhabdoviridae (4)
            • Lyssavirus (1)
              • unclassified Lyssavirus (1)
            • unclassified Rhabdoviridae (2)
              • Bracorhabdovirus (1)
              • 1027468
                Farmington virus
            • Vesiculovirus (1)
      • ssRNA positive-strand viruses, no DNA stage (59)
        • Astroviridae (2)
          • unclassified Astroviridae (2)
        • Caliciviridae (32)
          • Norovirus (32)
            • Norwalk virus (32)
              • Norovirus GV (32)
                • Murine norovirus (32)
                  • 351048 
                    Murine norovirus 3
                  • Murine norovirus GV (31)
                    • 463718 
                      Murine norovirus GV/CR1/2005/USA
                    • 463724 
                      Murine norovirus GV/CR10/2005/USA
                    • 463725 
                      Murine norovirus GV/CR11/2005/USA
                    • 463726 
                      Murine norovirus GV/CR13/2005/USA
                    • 463727 
                      Murine norovirus GV/CR15/2005/USA
                    • 463728 
                      Murine norovirus GV/CR17/2005/USA
                    • 463729 
                      Murine norovirus GV/CR18/2005/DEU
                    • 463719 
                      Murine norovirus GV/CR3/2005/USA
                    • 463720 
                      Murine norovirus GV/CR4/2005/USA
                    • 463721 
                      Murine norovirus GV/CR5/2005/USA
                    • 463722 
                      Murine norovirus GV/CR6/2005/USA
                    • 463723 
                      Murine norovirus GV/CR7/2005/USA
                    • 1028321
                      Murine norovirus GV/NIH-2409/2005/USA
                    • 1028322
                      Murine norovirus GV/NIH-2410/2005/USA
                    • 1028323
                      Murine norovirus GV/NIH-2411/2005/USA
                    • 1028324
                      Murine norovirus GV/NIH-2747/2005/USA
                    • 1028325
                      Murine norovirus GV/NIH-2750/2005/USA
                    • 1028326
                      Murine norovirus GV/NIH-4421/2005/USA
                    • 1028327
                      Murine norovirus GV/NIH-4428/2005/USA
                    • 1028328
                      Murine norovirus GV/NIH-4431/2005/USA
                    • 1028329
                      Murine norovirus GV/NIH-A114/2006/USA
                    • 1028330
                      Murine norovirus GV/NIH-D220/2007/USA
                    • 463709 
                      Murine norovirus GV/WU11/2005/USA
                    • 463710 
                      Murine norovirus GV/WU12/2005/USA
                    • 463711 
                      Murine norovirus GV/WU20/2005/USA
                    • 463712 
                      Murine norovirus GV/WU21/2005/USA
                    • 463713 
                      Murine norovirus GV/WU22/2005/USA
                    • 463714 
                      Murine norovirus GV/WU23/2005/USA
                    • 463715 
                      Murine norovirus GV/WU24/2005/USA
                    • 463716 
                      Murine norovirus GV/WU25/2005/USA
                    • 463717 
                      Murine norovirus GV/WU26/2005/USA
        • Flaviviridae (4)
          • Flavivirus (4)
            • Japanese encephalitis virus group (1)
              • Murray Valley encephalitis virus (1)
            • Ntaya virus group (1)
            • tick-borne encephalitis virus group (1)
              • 11084  
                Tick-borne encephalitis virus
            • 64320  
              Zika virus
        • Nidovirales (14)
          • Coronaviridae (14)
            • Coronavirinae (14)
              • Betacoronavirus (14)
                • Murine coronavirus (14)
                  • 11138  
                    Murine hepatitis virus (14)
                    • 591071 
                      Murine coronavirus inf-MHV-A59
                    • 502106 
                      Murine coronavirus MHV-1
                    • 502104 
                      Murine coronavirus MHV-3
                    • 591068 
                      Murine coronavirus MHV-JHM.IA
                    • 591069 
                      Murine coronavirus RA59/R13
                    • 502107 
                      Murine coronavirus RA59/SJHM
                    • 429331 
                      Murine coronavirus repA59/RJHM
                    • 429330 
                      Murine coronavirus repJHM/RA59
                    • 591070 
                      Murine coronavirus RJHM/A
                    • 430472 
                      Murine coronavirus SA59/RJHM
                    • 76344  
                      Murine hepatitis virus strain 2
                    • 11142  
                      Murine hepatitis virus strain A59
                    • 11144  
                      Murine hepatitis virus strain JHM
        • Picornavirales (7)
          • Picornaviridae (7)
            • Cardiovirus (5)
              • Cardiovirus A (2)
              • Cardiovirus B (3)
                • 204711 
                  Theilovirus (3)
                  • 434309 
                    Saffold virus
                  • Theiler's encephalomyelitis virus (1)
                    • 12127  
                      Theiler's encephalomyelitis virus (STRAIN GDVII)
            • Parechovirus (2)
              • unclassified Parechovirus (2)
    • Retro-transcribing viruses (15)
      • Retroviridae (15)
        • Orthoretrovirinae (15)
          • Betaretrovirus (1)
            • 11757  
              Mouse mammary tumor virus
          • Gammaretrovirus (14)
            • Mammalian gammaretrovirus group (7)
              • Replication competent viruses (6)
                • Murine leukemia virus (6)
                  • 11791  
                    AKR (endogenous) murine leukemia virus
                  • 11795  
                    Friend murine leukemia virus
                  • 11801  
                    Moloney murine leukemia virus
                  • unclassified Murine leukemia virus (3)
                    • 11792  
                      Cas-Br-E murine leukemia virus
                    • 44561  
                      Murine type C retrovirus
                    • 11938  
                      Rauscher murine leukemia virus
              • Replication defective viruses (1)
                • 11809  
                  Moloney murine sarcoma virus
            • unclassified Gammaretrovirus (7)
              • 11788  
                Abelson murine leukemia virus
              • Murine leukemia-related retroviruses (2)
              • 11830  
                Murine osteosarcoma virus (2)
                • 11806  
                  FBR murine osteosarcoma virus
              • 590745 
                Mus musculus mobilized endogenous polytropic provirus
              • Spleen focus-forming virus (1)
                • 11820  
                  Friend spleen focus-forming virus
9031   
Gallus gallus (65 known viruses)
  • Viruses (65)
    • dsDNA viruses, no RNA stage (14)
      • Adenoviridae (6)
        • Atadenovirus (1)
        • Aviadenovirus (5)
      • Herpesvirales (6)
        • Herpesviridae (6)
          • Alphaherpesvirinae (6)
            • Iltovirus (1)
              • 10386  
                Gallid alphaherpesvirus 1
            • Mardivirus (5)
              • 10390  
                Gallid alphaherpesvirus 2 (2)
                • 1123959
                  Gallid herpesvirus 2 strain 814
              • 35250  
                Gallid herpesvirus 3 (2)
                • 36353  
                  Marek's disease virus serotype 2 MDV2
              • 37108  
                Meleagrid alphaherpesvirus 1
      • Polyomaviridae (1)
        • Gammapolyomavirus (1)
          • Aves polyomavirus 1 (1)
            • 133789 
              Budgerigar fledgling disease virus - 1
      • Poxviridae (1)
        • Chordopoxvirinae (1)
          • Avipoxvirus (1)
    • ssDNA viruses (11)
      • Circoviridae (5)
        • Circovirus (1)
          • unclassified Circovirus (1)
            • Columbid circovirus (1)
              • 942030 
                Circovirus NGchicken38/NGA/2009
        • Gyrovirus (2)
          • 12618  
            Chicken anemia virus
          • unclassified Gyrovirus (1)
        • unclassified Circoviridae (2)
          • suggested genus Cyclovirus (2)
            • 942037 
              Cyclovirus NGchicken15/NGA/2009 (2)
              • 942036 
                Cyclovirus NGchicken8/NGA/2009
      • Parvoviridae (6)
        • Parvovirinae (6)
          • Aveparvovirus (3)
            • Galliform aveparvovirus 1 (3)
          • Dependoparvovirus (3)
            • Avian dependoparvovirus 1 (2)
              • 341671 
                Avian adeno-associated virus (2)
                • 281492 
                  Avian adeno-associated virus strain DA-1
            • unclassified Dependovirus (1)
              • 219704 
                Avian adeno-associated virus ATCC VR-865
    • dsRNA viruses (5)
      • Birnaviridae (1)
        • Avibirnavirus (1)
          • 10995  
            Infectious bursal disease virus
      • Reoviridae (4)
        • Sedoreovirinae (3)
          • Rotavirus (3)
            • Rotavirus D (1)
              • 884200 
                Rotavirus D chicken/05V0049/DEU/2005
            • Rotavirus F (1)
              • 994994 
                Rotavirus F chicken/03V0568/DEU/2003
            • Rotavirus G (1)
              • 994995 
                Rotavirus G chicken/03V0567/DEU/2003
        • Spinareovirinae (1)
          • Orthoreovirus (1)
    • ssRNA viruses (22)
      • ssRNA negative-strand viruses (4)
        • Mononegavirales (4)
          • Paramyxoviridae (3)
            • Avulavirus (3)
              • 35302  
                Avian paramyxovirus 2
              • Newcastle disease virus (1)
                • 139270 
                  Newcastle disease virus B1
              • unclassified Avulavirus (1)
          • Rhabdoviridae (1)
            • unclassified Rhabdoviridae (1)
      • ssRNA positive-strand viruses, no DNA stage (18)
        • Astroviridae (2)
          • Avastrovirus (2)
            • unclassified Avastrovirus (2)
        • Hepeviridae (1)
          • unassigned Hepeviridae (1)
        • Nidovirales (1)
          • Coronaviridae (1)
            • Coronavirinae (1)
              • Gammacoronavirus (1)
                • Avian coronavirus (1)
                  • 11120  
                    Infectious bronchitis virus
        • Picornavirales (14)
          • Picornaviridae (14)
            • Avihepatovirus (1)
              • Duck hepatitis A virus (1)
            • Gallivirus (2)
              • unclassified Gallivirus (2)
            • Megrivirus (1)
              • unclassified Megrivirus (1)
            • Sicinivirus (2)
              • 1755588
                Sicinivirus A
              • unclassified Sicinivirus (1)
            • Tremovirus (1)
              • 70796  
                Avian encephalomyelitis virus
            • unclassified Picornaviridae (7)
    • Retro-transcribing viruses (9)
      • Retroviridae (9)
        • Orthoretrovirinae (8)
          • Alpharetrovirus (7)
            • 11864  
              Avian leukosis virus (4)
            • 11885  
              Fujinami sarcoma virus
            • 11886  
              Rous sarcoma virus
            • unclassified Alpharetrovirus (1)
              • 11867  
                Avian myelocytomatosis virus
          • Gammaretrovirus (1)
            • Reticuloendotheliosis virus group (1)
              • 11636  
                Reticuloendotheliosis virus
        • unclassified Retroviridae (1)
          • Avian retroviruses (1)
            • 93465  
              Avian endogenous retrovirus EAV-HP
    • unclassified viruses (3)
      • Genomoviridae (3)
        • Gemycircularvirus (3)
          • unclassified Gemycircularvirus (3)
            • 1843737
              Faeces associated gemycircularvirus 17
            • 1843740
              Faeces associated gemycircularvirus 20
            • 1843761
              Sewage associated gemycircularvirus 3
10088  
Mus (50 known viruses)
  • Viruses (50)
    • dsDNA viruses, no RNA stage (2)
      • Polyomaviridae (1)
        • Alphapolyomavirus (1)
          • Mus musculus polyomavirus 1 (1)
            • 179241 
              Murine polyomavirus strain BG
      • Poxviridae (1)
        • Chordopoxvirinae (1)
          • Orthopoxvirus (1)
            • Ectromelia virus (1)
    • ssDNA viruses (8)
      • Circoviridae (1)
        • unclassified Circoviridae (1)
          • suggested genus Cyclovirus (1)
      • Parvoviridae (7)
        • Parvovirinae (7)
          • Protoparvovirus (7)
            • Rodent protoparvovirus 1 (7)
    • ssRNA viruses (39)
      • ssRNA negative-strand viruses (2)
        • Bunyaviridae (2)
          • Nairovirus (1)
            • Thiafora nairovirus (1)
          • Phlebovirus (1)
            • unclassified Phlebovirus (1)
      • ssRNA positive-strand viruses, no DNA stage (37)
        • Caliciviridae (32)
          • Norovirus (32)
            • Norwalk virus (32)
              • Norovirus GV (32)
                • Murine norovirus (32)
                  • 351048 
                    Murine norovirus 3
                  • Murine norovirus GV (31)
                    • 463718 
                      Murine norovirus GV/CR1/2005/USA
                    • 463724 
                      Murine norovirus GV/CR10/2005/USA
                    • 463725 
                      Murine norovirus GV/CR11/2005/USA
                    • 463726 
                      Murine norovirus GV/CR13/2005/USA
                    • 463727 
                      Murine norovirus GV/CR15/2005/USA
                    • 463728 
                      Murine norovirus GV/CR17/2005/USA
                    • 463729 
                      Murine norovirus GV/CR18/2005/DEU
                    • 463719 
                      Murine norovirus GV/CR3/2005/USA
                    • 463720 
                      Murine norovirus GV/CR4/2005/USA
                    • 463721 
                      Murine norovirus GV/CR5/2005/USA
                    • 463722 
                      Murine norovirus GV/CR6/2005/USA
                    • 463723 
                      Murine norovirus GV/CR7/2005/USA
                    • 1028321
                      Murine norovirus GV/NIH-2409/2005/USA
                    • 1028322
                      Murine norovirus GV/NIH-2410/2005/USA
                    • 1028323
                      Murine norovirus GV/NIH-2411/2005/USA
                    • 1028324
                      Murine norovirus GV/NIH-2747/2005/USA
                    • 1028325
                      Murine norovirus GV/NIH-2750/2005/USA
                    • 1028326
                      Murine norovirus GV/NIH-4421/2005/USA
                    • 1028327
                      Murine norovirus GV/NIH-4428/2005/USA
                    • 1028328
                      Murine norovirus GV/NIH-4431/2005/USA
                    • 1028329
                      Murine norovirus GV/NIH-A114/2006/USA
                    • 1028330
                      Murine norovirus GV/NIH-D220/2007/USA
                    • 463709 
                      Murine norovirus GV/WU11/2005/USA
                    • 463710 
                      Murine norovirus GV/WU12/2005/USA
                    • 463711 
                      Murine norovirus GV/WU20/2005/USA
                    • 463712 
                      Murine norovirus GV/WU21/2005/USA
                    • 463713 
                      Murine norovirus GV/WU22/2005/USA
                    • 463714 
                      Murine norovirus GV/WU23/2005/USA
                    • 463715 
                      Murine norovirus GV/WU24/2005/USA
                    • 463716 
                      Murine norovirus GV/WU25/2005/USA
                    • 463717 
                      Murine norovirus GV/WU26/2005/USA
        • Flaviviridae (2)
          • Flavivirus (2)
            • Japanese encephalitis virus group (1)
              • West Nile virus (1)
                • 406269 
                  West Nile virus strain PTRoxo
            • tick-borne encephalitis virus group (1)
        • Nidovirales (1)
          • Coronaviridae (1)
            • Coronavirinae (1)
              • Betacoronavirus (1)
                • Murine coronavirus (1)
                  • Murine hepatitis virus (1)
                    • 11142  
                      Murine hepatitis virus strain A59
        • Picornavirales (1)
          • Picornaviridae (1)
            • Cardiovirus (1)
              • Cardiovirus A (1)
                • Encephalomyocarditis virus (1)
        • Togaviridae (1)
          • Alphavirus (1)
    • Retro-transcribing viruses (1)
      • Retroviridae (1)
        • Orthoretrovirinae (1)
          • Gammaretrovirus (1)
            • unclassified Gammaretrovirus (1)
              • 11819  
                Spleen focus-forming virus
9615   
Canis lupus familiaris (47 known viruses)
  • Viruses (47)
    • dsDNA viruses, no RNA stage (20)
      • Adenoviridae (3)
        • Mastadenovirus (3)
      • Herpesvirales (1)
        • Herpesviridae (1)
          • Alphaherpesvirinae (1)
            • Varicellovirus (1)
      • Papillomaviridae (15)
        • Chipapillomavirus (5)
          • Chipapillomavirus 1 (3)
          • Chipapillomavirus 2 (1)
          • Chipapillomavirus 3 (1)
            • 1081055
              Canis familiaris papillomavirus 8
        • Lambdapapillomavirus (2)
          • 35258  
            Lambdapapillomavirus 2
          • Lambdapapillomavirus 3 (1)
            • 1513269
              Canis familiaris papillomavirus 6
        • Taupapillomavirus (3)
          • Taupapillomavirus 1 (2)
            • 292792 
              Canis familiaris papillomavirus 2 (2)
          • Taupapillomavirus 2 (1)
            • 1226723
              Canis familiaris papillomavirus 13
        • unclassified Papillomaviridae (5)
          • non-primate mammal papillomaviruses (5)
      • Poxviridae (1)
        • Chordopoxvirinae (1)
          • Orthopoxvirus (1)
    • ssDNA viruses (8)
      • Anelloviridae (1)
        • Thetatorquevirus (1)
      • Circoviridae (1)
        • Circovirus (1)
      • Parvoviridae (6)
        • Parvovirinae (6)
          • Bocaparvovirus (3)
            • Carnivore bocaparvovirus 1 (1)
            • Carnivore bocaparvovirus 2 (1)
            • unclassified Bocaparvovirus (1)
          • Protoparvovirus (3)
            • Carnivore protoparvovirus 1 (3)
              • Feline panleukopenia virus (3)
                • 10788  
                  Canine parvovirus (3)
                  • Canine parvovirus 2 (2)
    • dsRNA viruses (3)
      • Reoviridae (3)
        • Sedoreovirinae (3)
          • Orbivirus (2)
          • Rotavirus (1)
            • unclassified rotaviruses (1)
    • ssRNA viruses (15)
      • ssRNA negative-strand viruses (5)
        • Mononegavirales (5)
          • Paramyxoviridae (2)
            • Morbillivirus (1)
              • 11232  
                Canine distemper virus
            • Rubulavirus (1)
          • Pneumoviridae (1)
            • Pneumovirus (1)
              • unclassified Pneumovirus (1)
          • Rhabdoviridae (2)
            • Lyssavirus (2)
      • ssRNA positive-strand viruses, no DNA stage (10)
        • Astroviridae (1)
          • Mamastrovirus (1)
            • unclassified Mamastrovirus (1)
        • Caliciviridae (3)
          • Vesivirus (3)
            • unclassified Vesivirus (3)
        • Flaviviridae (1)
          • Flavivirus (1)
            • tick-borne encephalitis virus group (1)
        • Nidovirales (1)
          • Coronaviridae (1)
            • Coronavirinae (1)
              • Betacoronavirus (1)
                • Betacoronavirus 1 (1)
                  • 215681 
                    Canine respiratory coronavirus
        • Picornavirales (4)
          • Picornaviridae (3)
            • Dicipivirus (1)
              • Cadicivirus A (1)
            • Kobuvirus (2)
              • Aichivirus A (2)
                • Canine kobuvirus 1 (1)
                  • 1082189
                    Canine kobuvirus US-PC0082
                • 1281440
                  Canine kobuvirus CH-1
          • unclassified Picornavirales (1)
    • unclassified viruses (1)
      • Genomoviridae (1)
        • Gemycircularvirus (1)
          • unclassified Gemycircularvirus (1)
            • 1843735
              Faeces associated gemycircularvirus 15
9544   
Macaca mulatta (47 known viruses)
  • Viruses (47)
    • dsDNA viruses, no RNA stage (24)
      • Adenoviridae (16)
        • Mastadenovirus (16)
          • Human mastadenovirus G (3)
          • Simian mastadenovirus A (2)
          • unclassified Simian adenoviruses (11)
      • Herpesvirales (6)
        • Herpesviridae (6)
          • Alphaherpesvirinae (2)
            • Simplexvirus (2)
              • 10325  
                Macacine alphaherpesvirus 1
              • 340907 
                Papiine alphaherpesvirus 2
          • Betaherpesvirinae (1)
            • Cytomegalovirus (1)
              • 47929  
                Macacine betaherpesvirus 3
          • Gammaherpesvirinae (3)
            • Lymphocryptovirus (1)
              • 45455  
                Macacine gammaherpesvirus 4
            • Rhadinovirus (2)
              • 154334 
                Macacine gammaherpesvirus 5 (2)
                • 83534  
                  Macaca mulatta rhadinovirus 17577
      • Papillomaviridae (2)
        • Alphapapillomavirus (2)
          • 10570  
            Alphapapillomavirus 12 (2)
            • 464935 
              Rhesus papillomavirus type 1b
    • ssDNA viruses (4)
      • Parvoviridae (4)
        • Parvovirinae (4)
          • Dependoparvovirus (4)
            • Adeno-associated dependoparvovirus A (4)
              • 85106  
                Adeno-associated virus - 1
              • 57579  
                Adeno-associated virus - 4 (3)
    • ssRNA viruses (16)
      • ssRNA positive-strand viruses, no DNA stage (16)
        • Flaviviridae (1)
          • Flavivirus (1)
        • Nidovirales (1)
          • Arteriviridae (1)
            • Arterivirus (1)
        • Picornavirales (14)
          • Picornaviridae (14)
            • Enterovirus (12)
            • Hepatovirus (1)
              • Hepatovirus A (1)
                • 12101  
                  Simian hepatitis A virus
            • Sapelovirus (1)
              • Sapelovirus B (1)
    • Retro-transcribing viruses (3)
      • Retroviridae (3)
        • Orthoretrovirinae (3)
          • Betaretrovirus (3)
9397   
Chiroptera (45 known viruses)
  • Viruses (45)
    • ssDNA viruses (5)
      • Circoviridae (5)
        • Circovirus (4)
          • unclassified Circovirus (4)
            • 1572237
              Bat circovirus POA/2012/II
            • 1572239
              Bat circovirus POA/2012/VI
            • 1072162
              Bat circovirus ZS/China/2011
            • 1732201
              Tadarida brasiliensis circovirus 1
        • unclassified Circoviridae (1)
          • suggested genus Cyclovirus (1)
    • dsRNA viruses (2)
      • Reoviridae (1)
        • Spinareovirinae (1)
          • Orthoreovirus (1)
            • Pteropine orthoreovirus (1)
      • Totiviridae (1)
        • unclassified Totiviridae (1)
    • ssRNA viruses (37)
      • ssRNA negative-strand viruses (1)
        • Mononegavirales (1)
          • Rhabdoviridae (1)
            • Lyssavirus (1)
      • ssRNA positive-strand viruses, no DNA stage (36)
        • Astroviridae (1)
          • unclassified Astroviridae (1)
            • 1906170
              Bastrovirus-like_virus/VietNam/Bat/17819_21
        • Caliciviridae (1)
          • Sapovirus (1)
            • unclassified Sapovirus (1)
        • Flaviviridae (1)
          • Flavivirus (1)
            • Rio Bravo virus group (1)
        • Nidovirales (32)
          • Coronaviridae (32)
            • Coronavirinae (32)
              • Alphacoronavirus (3)
                • Bat coronavirus HKU10 (2)
                  • 1241932
                    Hipposideros bat coronavirus HKU10
                  • 1241933
                    Rousettus bat coronavirus HKU10
                • unclassified Alphacoronavirus (1)
                  • Bat coronavirus 1A (1)
              • Betacoronavirus (29)
                • 694008 
                  Pipistrellus bat coronavirus HKU5 (5)
                • 694006 
                  Rousettus bat coronavirus HKU9 (9)
                • Severe acute respiratory syndrome-related coronavirus (10)
                  • SARS coronavirus (10)
                    • Bat coronavirus HKU3 (10)
                      • 741997 
                        Bat SARS coronavirus HKU3-10
                      • 741998 
                        Bat SARS coronavirus HKU3-11
                      • 741999 
                        Bat SARS coronavirus HKU3-12
                      • 742000 
                        Bat SARS coronavirus HKU3-13
                      • 742001 
                        Bat SARS coronavirus HKU3-4
                      • 742002 
                        Bat SARS coronavirus HKU3-5
                      • 742003 
                        Bat SARS coronavirus HKU3-6
                      • 742004 
                        Bat SARS coronavirus HKU3-7
                      • 742005 
                        Bat SARS coronavirus HKU3-8
                      • 742006 
                        Bat SARS coronavirus HKU3-9
                • 694007 
                  Tylonycteris bat coronavirus HKU4 (5)
        • Tymovirales (1)
          • unclassified Tymovirales (1)
    • unclassified viruses (1)
9534   
Chlorocebus aethiops (45 known viruses)
  • Viruses (45)
    • dsDNA viruses, no RNA stage (17)
      • Adenoviridae (7)
        • Mastadenovirus (7)
          • Simian mastadenovirus A (2)
          • unclassified Simian adenoviruses (5)
      • Asfarviridae (1)
        • Asfivirus (1)
          • 10497  
            African swine fever virus
      • Herpesvirales (3)
        • Herpesviridae (3)
          • Alphaherpesvirinae (2)
            • Simplexvirus (1)
              • 10317  
                Cercopithecine alphaherpesvirus 2
            • Varicellovirus (1)
              • 35246  
                Cercopithecine alphaherpesvirus 9
          • Betaherpesvirinae (1)
            • Cytomegalovirus (1)
              • 50292  
                Cercopithecine betaherpesvirus 5
      • Polyomaviridae (1)
        • unclassified Polyomaviridae (1)
          • 12480  
            African green monkey polyomavirus
      • Poxviridae (5)
        • Chordopoxvirinae (4)
          • Orthopoxvirus (3)
          • Yatapoxvirus (1)
        • unclassified Poxviridae (1)
    • ssDNA viruses (5)
      • Anelloviridae (5)
        • Alphatorquevirus (5)
          • unclassified Alphatorquevirus (5)
            • 1619218
              Simian torque teno virus 30
            • 1619219
              Simian torque teno virus 31
            • 1619220
              Simian torque teno virus 32
            • 1629656
              Simian torque teno virus 33
            • 1629657
              Simian torque teno virus 34
    • ssRNA viruses (20)
      • ssRNA negative-strand viruses (12)
        • Arenaviridae (2)
          • Arenavirus (1)
            • Old world arenaviruses (1)
              • unclassified Old world arenaviruses (1)
                • 300180 
                  Mopeia Lassa virus reassortant 29
          • Mammarenavirus (1)
            • 11628  
              Machupo mammarenavirus
        • Bunyaviridae (2)
          • Hantavirus (1)
          • Nairovirus (1)
            • Thiafora nairovirus (1)
        • Mononegavirales (8)
          • Filoviridae (4)
            • Marburgvirus (4)
              • 11269  
                Marburg marburgvirus (4)
                • 378830 
                  Lake Victoria marburgvirus - Angola2005
                • 33727  
                  Marburg virus - Musoke, Kenya, 1980
                • 378809 
                  Ravn virus - Ravn, Kenya, 1987
          • Paramyxoviridae (1)
            • Avulavirus (1)
          • Rhabdoviridae (3)
            • unclassified Rhabdoviridae (2)
            • Vesiculovirus (1)
              • unclassified Vesiculovirus (1)
      • ssRNA positive-strand viruses, no DNA stage (8)
        • Caliciviridae (1)
          • Vesivirus (1)
            • unclassified Vesivirus (1)
              • 1564182
                San Miguel sea lion virus 8
        • Flaviviridae (2)
          • Flavivirus (2)
            • 64303  
              Aroa virus
            • Japanese encephalitis virus group (1)
              • West Nile virus (1)
                • 307044 
                  West Nile virus strain 385-99
        • Nidovirales (1)
          • Arteriviridae (1)
            • Arterivirus (1)
              • 38143  
                Simian hemorrhagic fever virus
        • Picornavirales (3)
          • Picornaviridae (3)
            • Enterovirus (3)
              • Enterovirus A (1)
              • Enterovirus B (1)
              • 1330521
                Enterovirus J
        • Togaviridae (1)
          • Alphavirus (1)
    • Retro-transcribing viruses (3)
      • Retroviridae (3)
        • Orthoretrovirinae (2)
          • Deltaretrovirus (1)
            • Primate T-lymphotropic virus 1 (1)
              • 33747  
                Simian T-lymphotropic virus 1
          • Lentivirus (1)
            • Primate lentivirus group (1)
              • 11723  
                Simian immunodeficiency virus
        • Spumaretrovirinae (1)
          • Spumavirus (1)
            • 338079 
              African green monkey simian foamy virus
9940   
Ovis aries (45 known viruses)
  • Viruses (45)
    • dsDNA viruses, no RNA stage (9)
      • Adenoviridae (1)
        • Atadenovirus (1)
          • Ovine adenovirus D (1)
      • Herpesvirales (1)
        • Herpesviridae (1)
          • Gammaherpesvirinae (1)
            • Macavirus (1)
              • 10398  
                Ovine gammaherpesvirus 2
      • Papillomaviridae (3)
        • Deltapapillomavirus (2)
          • 56144  
            Deltapapillomavirus 3 (2)
            • 56145  
              Ovine papillomavirus type 2
        • Dyokappapapillomavirus (1)
          • Dyokappapapillomavirus 1 (1)
            • 634772 
              Ovis aries papillomavirus 3
      • Polyomaviridae (1)
        • unclassified Polyomaviridae (1)
      • Poxviridae (3)
        • Chordopoxvirinae (3)
          • Capripoxvirus (2)
            • Goatpox virus (1)
            • 10266  
              Sheeppox virus
          • Parapoxvirus (1)
    • dsRNA viruses (2)
      • Reoviridae (2)
        • Sedoreovirinae (2)
          • Orbivirus (2)
    • ssRNA viruses (24)
      • ssRNA negative-strand viruses (7)
        • Bunyaviridae (3)
          • Nairovirus (1)
            • 11593  
              Crimean-Congo hemorrhagic fever nairovirus
          • Orthobunyavirus (1)
            • Akabane orthobunyavirus (1)
          • Phlebovirus (1)
            • Rift Valley fever phlebovirus (1)
              • 11588  
                Rift Valley fever virus
        • Mononegavirales (4)
          • Bornaviridae (1)
            • Bornavirus (1)
              • Mammalian 2 bornavirus (1)
                • 1885248
                  Variegated squirrel bornavirus 1
          • Paramyxoviridae (2)
            • Morbillivirus (2)
              • 31604  
                Peste-des-petits-ruminants virus
              • Rinderpest virus (1)
                • 11242  
                  Rinderpest virus (strain Kabete O)
          • Rhabdoviridae (1)
            • Lyssavirus (1)
      • ssRNA positive-strand viruses, no DNA stage (17)
        • Astroviridae (1)
          • Mamastrovirus (1)
        • Flaviviridae (5)
          • Flavivirus (2)
            • tick-borne encephalitis virus group (1)
            • Yellow fever virus group (1)
          • Pestivirus (3)
            • 358764 
              Border disease virus
            • 54315  
              Bovine viral diarrhea virus 2
            • unclassified Pestivirus (1)
              • Aydin virus (1)
                • 1234809
                  Pestivirus strain Aydin/04-TR
        • Picornavirales (10)
          • Picornaviridae (10)
            • Aphthovirus (9)
              • Foot-and-mouth disease virus (9)
                • Foot-and-mouth disease virus - type C (2)
                  • 12121  
                    Foot-and-mouth disease virus C1
                  • 46291  
                    Foot-and-mouth disease virus C4
                • 12118  
                  Foot-and-mouth disease virus - type O (6)
                  • 461287 
                    Foot-and-mouth disease virus O/UKG/3952/2001
                  • 461288 
                    Foot-and-mouth disease virus O/UKG/4141/2001
                  • 461296 
                    Foot-and-mouth disease virus O/UKG/5681/2001
                  • 461291 
                    Foot-and-mouth disease virus O/UKG/7299/2001
                  • 461294 
                    Foot-and-mouth disease virus O/UKG/9443/2001
                • 12123  
                  Foot-and-mouth disease virus - type SAT 3
            • Enterovirus (1)
              • Enterovirus G (1)
        • Togaviridae (1)
          • Alphavirus (1)
    • Retro-transcribing viruses (5)
      • Retroviridae (5)
        • Orthoretrovirinae (5)
          • Betaretrovirus (2)
            • 11746  
              Jaagsiekte sheep retrovirus
            • unclassified Betaretrovirus (1)
              • 69576  
                Ovine enzootic nasal tumor virus
          • Lentivirus (3)
            • Ovine/caprine lentivirus group (2)
              • Caprine arthritis encephalitis virus (1)
                • 621214 
                  Caprine arthritis encephalitis virus Ov496
              • 11741  
                Visna/maedi virus
            • unclassified Lentivirus (1)
    • unclassified viruses (5)
      • Genomoviridae (2)
        • Gemycircularvirus (2)
          • unclassified Gemycircularvirus (2)
            • Faeces associated gemycircularvirus 1 (1)
              • 1391028
                Faecal-associated gemycircularvirus 1a
            • 1843736
              Faeces associated gemycircularvirus 16
      • Smacovirusgroup (3)
        • 1843756
          Sheep faeces associated smacovirus 1
        • 1843757
          Sheep faeces associated smacovirus 2
        • 1843758
          Sheep faeces associated smacovirus 3