KEGG   COMPOUND: C00315Help
Entry
C00315                      Compound                               

Name
Spermidine;
N-(3-Aminopropyl)-1,4-butane-diamine
Formula
C7H19N3
Exact mass
145.1579
Mol weight
145.2459
Structure
Mol fileKCF fileDB search
Reaction
Pathway
map00330  Arginine and proline metabolism
map00410  beta-Alanine metabolism
map00480  Glutathione metabolism
map00940  Phenylpropanoid biosynthesis
map01100  Metabolic pathways
map02010  ABC transporters
map04976  Bile secretion
Module
M00133  Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine
Enzyme
1.5.3.13        1.5.3.14        1.5.3.16        1.5.3.17        
1.5.99.6        2.3.1.248       2.3.1.249       2.5.1.16        
2.5.1.22        2.5.1.44        2.5.1.45        2.5.1.46        
2.5.1.79        2.5.1.128       3.5.1.48        3.5.1.78        
3.5.1.-         3.5.3.24        4.1.1.96        6.3.1.8         
6.3.1.9
Other DBs
CAS: 124-20-9
PubChem: 3609
ChEBI: 16610
ChEMBL: CHEMBL19612
KNApSAcK: C00001431
PDB-CCD: SPD[PDBj] SR0[PDBj]
3DMET: B01214
NIKKAJI: J10.054D
KCF data Show

ATOM        10
            1   C1b C    23.8990  -23.5201
            2   N1b N    25.1010  -22.8199
            3   C1b C    22.6854  -22.8199
            4   C1b C    26.3146  -23.5201
            5   C1b C    21.4717  -23.5201
            6   C1b C    27.5283  -22.8199
            7   C1b C    20.2581  -22.8199
            8   C1b C    28.7419  -23.5201
            9   N1a N    19.0445  -23.5201
            10  N1a N    29.9555  -22.8199
BOND        9
            1     1   2 1
            2     1   3 1
            3     2   4 1
            4     3   5 1
            5     4   6 1
            6     5   7 1
            7     6   8 1
            8     7   9 1
            9     8  10 1

» Japanese version

KEGG   COMPOUND: C00134Help
Entry
C00134                      Compound                               

Name
Putrescine;
1,4-Butanediamine;
1,4-Diaminobutane;
Tetramethylenediamine;
Butane-1,4-diamine
Formula
C4H12N2
Exact mass
88.1
Mol weight
88.1515
Structure
Mol fileKCF fileDB search
Reaction
Pathway
map00330  Arginine and proline metabolism
map00472  D-Arginine and D-ornithine metabolism
map00480  Glutathione metabolism
map00960  Tropane, piperidine and pyridine alkaloid biosynthesis
map01060  Biosynthesis of plant secondary metabolites
map01064  Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid
map01100  Metabolic pathways
map01110  Biosynthesis of secondary metabolites
map01130  Biosynthesis of antibiotics
map02010  ABC transporters
map04974  Protein digestion and absorption
Module
M00133  Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine
M00134  Polyamine biosynthesis, arginine => ornithine => putrescine
M00135  GABA biosynthesis, eukaryotes, putrescine => GABA
M00136  GABA biosynthesis, prokaryotes, putrescine => GABA
Enzyme
1.4.3.10        1.4.3.22        1.5.1.43        1.5.3.13        
1.5.3.17        2.1.1.53        2.1.3.6         2.3.1.57        
2.3.1.138       2.3.1.-         2.5.1.16        2.5.1.44        
2.5.1.45        2.6.1.29        2.6.1.82        2.6.1.113       
3.5.1.53        3.5.1.62        3.5.3.11        4.1.1.17        
4.1.1.116       6.3.1.11
Brite
Compounds with biological roles [BR:br08001]
 Peptides
  Amines
   Biogenic amines
    C00134  Putrescine
BRITE hierarchy
Other DBs
CAS: 110-60-1
PubChem: 3434
ChEBI: 17148
ChEMBL: CHEMBL46257
KNApSAcK: C00001428
PDB-CCD: PUT[PDBj]
3DMET: B00037
NIKKAJI: J1.979H
KCF data Show

ATOM        6
            1   C1b C    25.0120  -16.1708
            2   C1b C    26.2280  -15.4692
            3   C1b C    23.8016  -15.4692
            4   C1b C    27.4384  -16.1708
            5   N1a N    22.5913  -16.1708
            6   N1a N    28.6487  -15.4692
BOND        5
            1     1   2 1
            2     1   3 1
            3     2   4 1
            4     3   5 1
            5     4   6 1

» Japanese version

DBGET integrated database retrieval system