KEGG   COMPOUND: C00361
Entry
C00361                      Compound                               

Name
dGDP;
2'-Deoxyguanosine 5'-diphosphate
Formula
C10H15N5O10P2
Exact mass
427.0294
Mol weight
427.2011
Structure
Reaction
Pathway
map00230  Purine metabolism
map01100  Metabolic pathways
Enzyme
1.17.4.1        2.7.1.40        2.7.1.48        2.7.4.6         
2.7.4.8         2.7.4.12
Brite
Compounds with biological roles [BR:br08001]
 Nucleic acids
  Nucleotides
   Deoxyribonucleotides
    C00361  dGDP
Other DBs
PubChem: 3652
ChEBI: 28862
ChEMBL: CHEMBL1232205
PDB-CCD: DGI[PDBj]
3DMET: B01227
NIKKAJI: J366.498H
KCF data

ATOM        27
            1   C8y C    30.9856  -19.2791
            2   N4y N    29.9285  -18.5373
            3   C8y C    32.2180  -18.3680
            4   N5x N    31.1199  -20.7042
            5   C1y C    28.6377  -18.9577
            6   C8x C    30.3956  -17.1413
            7   N5x N    31.8442  -17.1530
            8   C8y C    33.4678  -18.9286
            9   C8y C    32.4458  -21.2823
            10  O2x O    27.4988  -18.1051
            11  C1x C    28.2054  -20.2135
            12  N4x N    33.6314  -20.4120
            13  O5x O    34.5776  -18.0992
            14  N1a N    32.5976  -22.6666
            15  C1y C    26.3949  -18.8993
            16  C1y C    26.8270  -20.2135
            17  C1b C    25.0749  -18.4672
            18  O1a O    26.3773  -21.5277
            19  O2b O    24.0294  -19.4017
            20  P1b P    22.6335  -19.4017
            21  O2c O    21.2375  -19.4017
            22  O1c O    22.6276  -20.7975
            23  O1c O    22.6276  -17.9999
            24  P1b P    19.8417  -19.3900
            25  O1c O    19.8300  -20.7918
            26  O1c O    18.4399  -19.3900
            27  O1c O    19.8300  -17.9942
BOND        29
            1     1   2 1
            2     1   3 2
            3     1   4 1
            4     5   2 1 #Up
            5     2   6 1
            6     3   7 1
            7     3   8 1
            8     4   9 2
            9     5  10 1
            10    5  11 1
            11    8  12 1
            12    8  13 2
            13    9  14 1
            14   10  15 1
            15   11  16 1
            16   15  17 1 #Up
            17   16  18 1 #Down
            18   17  19 1
            19   19  20 1
            20   20  21 1
            21   20  22 1
            22   20  23 2
            23   21  24 1
            24   24  25 1
            25   24  26 1
            26   24  27 2
            27    6   7 2
            28    9  12 1
            29   15  16 1

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