KEGG ORTHOLOGY: K01979

KEGG

ORTHOLOGY: K01979

Entry

K01979 RNA KO

Name

SSUrRNA

Definition

small subunit ribosomal RNA

Pathway

Ribosome biogenesis in eukaryotes

Ribosome

Brite

KEGG Orthology (KO) [BR:ko00001]
09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    K01979  SSUrRNA; small subunit ribosomal RNA
   03008 Ribosome biogenesis in eukaryotes
    K01979  SSUrRNA; small subunit ribosomal RNA
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome
    K01979  SSUrRNA; small subunit ribosomal RNA
  09184 RNA family
   03100 Non-coding RNAs
    K01979  SSUrRNA; small subunit ribosomal RNA
Ribosome [BR:ko03011]
Ribosomal RNAs
  Eukaryotes
   K01979  SSUrRNA; small subunit ribosomal RNA
Non-coding RNAs [BR:ko03100]
Ribosomal RNA
  Small subunit rRNA
   K01979  SSUrRNA; small subunit ribosomal RNA

Genes

HSA:	4549(RNR1)

PTR:

PPS:

GGO:

PON:

NLE:

MCC:

MCF:

CSAB:

RRO:

CJC:

SBQ:

MMU:	17724(mt-Rnr1)

RNO:	100861533(Rn18s) 170602(Rnr1)

CGE:

NGI:

HGL:

OCU:	100328976(RN18S) 12S_rRNA

CFA:

AML:

UMR:

FCA:

BTA:

BOM:

CHX:

OAS:

SSC:	100861538(RN18S) 12S_rRNA

CFR:

LVE:

ECB:	100861557(RN18S) s-rRNA

MYB:

MYD:

PALE:

LAV:

MDO:

SHR:

OAA:

MGP:

CJO:

APLA:

TGU:

FAB:

PHI:

FPG:

FCH:

CLV:

ASN:

AMJ:

PSS:

CMY:

ACS:

PBI:

GJA:	26044415(APQ53_gr02)

XLA:

XTR:

DRE:	140505(mt-rnr1)

TRU:

TNG:

MZE:	26037630(APK84_gr02)

OLA:

XMA:

SASA:

LCM:

CMK:

BFO:

SPU:

SKO:

DME:	Dmel_CR34096(srRNA) Dmel_CR41548(18SrRNA:CR41548) Dmel_CR45838(18SrRNA:CR45838) Dmel_CR45841(18SrRNA:CR45841)

DSE:

DSI:

DYA:

DPO:	Dpse_GA30004(Dpse_18SrRNA:GA30004)

DMO:	Dmoj_GI25475(Dmoj_18SrRNA:GI25475)

MDE:

AGA:

CQU:

SOC:

TCA:

BMOR:

DPL:

PXY:

API:

DPX:

CEL:	CELE_F31C3.7(rrn-1.1) CELE_F31C3.8(rrn-1.2) s-rRNA

CBR:

BMY:

LOA:

TSP:

CRG:	s-rRNA-1 s-rRNA-2

SMM:

ADF:

HMG:

TAD:	TradoM_r03(rns)

AQU:

ATH:	AT3G41768 ArthCr086(rrn16S) ArthCr088 ArthMr003(rrn18)

EUS:	ASK66_gr001(rrn16S) ASK66_gr008(rrn16S)

BNA:	11542036(rrn16S) 11542053(rrn16S) 4237952(rrn18)

CIT:	4271104(CisiCr008) 4271177(CisiCr001)

TCC:	9978167(rrn16) 9978195(rrn16)

GRA:	11538527(A6772_cr001) 11538601(A6772_cr008) 27429572(rrn18) 27429620(rrn18)

EGR:	9829709(rrn16) 9845765(EucgrC_r008)

GMX:	15308557(rrnS) 3989345(rrn16) 3989374(rrn16)

PVU:	PhvuCr105(rrn16) PhvuCr121(rrn16)

VAR:	15382720(rrn16)

CAM:	6797524(CiarC_r001)

FVE:	10251570(rrn16) 10251599(rrn16)

PMUM:

18681166(CP95_r008) 18681169(CP95_r001)

MDM:	13630232(18rrn)

CSV:	11123874(rrnS) 11123911(rrnS) 3429365(16SrRNA) 3429366(16SrRNA)

RCU:	10221391(rrn18) 11542369(rrn16) 11542398(rrn16)

JCU:	7636391(rrn16) 7636408(rrn16)

VVI:	4025010(ViviCr008) 4025065(ViviCr001) 7498754(18Srrn)

SLY:	3950430(LyesC2r008) 3950467(LyesC2r001)

SOT:	4099937(SotuCr001) 4099944(SotuCr008)

INI:	29200395(rrnS) 29200436(rrn16) 29200443(rrn16)

SIND:

11452464(rrn16) 11452494(rrn16)

BVG:	809573(rrn18)

NNU:	20964221(rrn16) 20964238(rrn16) 28482677(rRNA18) 28482717(rRNA18)

OSA:	3131364(OrsajCr113) 3131380(OrsajCr120) 6450167(rrn18)

OBR:	BBW32_gr001(rrn16) BBW32_gr008(rrn16)

BDI:	6439810(BrdiC_r001) 6439890(BrdiC_r008)

ZMA:	1466350(ZemaCr113) 1466357(ZemaCr120)

SITA:

19526838(W841_r001) 19526866(W841_r008)

PDA:	18S_rRNA 8890561(rrn16) 8890612(rrn16)

EGU:	12079438(rrn16) 12079492(rrn16)

ATR:	2546492(AmtrCr008) 2546558(rrn16S)

SMO:	SemoP_r001(rrn16) SemoP_r008(rrn16)

CRE:	ChreCr001(rrnS) ChreCr010(rrnS)

CSL:	CospCoM_r02(rrnS) CospP_r003(rrs)

CVR:	ChvaP_r003(rrnS) OJ20_r01(rrnS)

APRO:

OTA:	OstapCr01(rrs) OstapCr06(rrs) OstapMr01(rrs) OstapMr02(rrs) OstapMr05(rrs) OstapMr06(rrs)

BPG:	Bathy11g00185 Bathy11g00685 BathyCg00226 BathyMg00106 BathyMg00242

MIS:	MicpuN_chl59(rrs3) MicpuN_chl6(rrs1) MicpuN_mit43(rrs_2.1) MicpuN_mit44(rrs_2.2) MicpuN_mit8(rrs_1.1) MicpuN_mit9(rrs_1.2)

CME:	CYME_CMQ305R CYME_CMQ401R CYME_CMR208R CymeCr210(rrn16)

GSL:	JL72_r001(rrn16) JL72_r006(rrn16) JL72_r02(rrnS)

CCP:	CHC_195(rrs) ChcroMr28(rns)

SCE:	Q0020(15S_RRNA) RDN18-1 RDN18-2

ERC:	Ecym_4195 Ecym_4199

KLA:	KllafMr02(srRNA)

LTH:	KLTH0H13213r KLTH0H13232r KLTH0H13254r

ZRO:	ZYRO0E10104r ZYRO0E10114r ZYRO0E10134r

CGR:	CAGL0L13398r CaglfMr14(15S_rRNA)

NCS:	NCAS_RDN18-1 NCAS_RDN18-2

NDI:	NDAI_RDN18-1

TPF:	TPHA_RDN18-1

TBL:	TBLA_RDN18-1a TBLA_RDN18-2a

TDL:	TDEL_RDN18-1 TDEL_RDN18-2 TDEL_RDN18-3

KAF:	KAFR_RDN18-1(RDN18-1)

DHA:	SSU_rRNA(SSU)

CAL:	CAALFM_CR08770WA(RDN18) CaalfMr17(rns)

YLI:

PAN:	PoanfMr56(rns)

FGR:	FGSG_20047 FGSG_20049 FGSG_20050 FGSG_20052 FGSG_20054 FGSG_20056 FGSG_20058 FGSG_20072 FGSG_20074 FGSG_20077 FGSG_20079 FGSG_20081 FGSG_20083 FGSG_20084 FGSG_20087 GizefMr34

VDA:	VDAG_20042 VDAG_20044

ANI:	ANID_20048(rns)

ANG:

CIM:	CIMG_15516 CIMG_15521 CIMG_15523 CIMG_15525 CIMG_15527

PBL:	PAAG_12685 PAAG_12691

PNO:

SPO:	SPRRNA.42 SPRRNA.43 SPRRNA.44 SPRRNA.45 SPRRNA.46 ScpofMr12

WIC:	J056_004865

UMA:	UMAG_16215

ECU:	ECU01_0025 ECU01_1585

EIN:	Eint_010020 Eint_011400 Eint_040020 Eint_050020 Eint_100020

EHE:	EHEL_010020 EHEL_011370 EHEL_020020 EHEL_030020 EHEL_041640 EHEL_060020 EHEL_070020

SRE:	PTSG_20003 PTSG_20006 PTSG_20012 PTSG_20021 PTSG_20026 PTSG_20032 PTSG_20035 PTSG_20036 PTSG_20038 PTSG_20041 PTSG_20043

DDI:	DidioMr43(rnsA)

DFA:	Difao_mr01

PCB:	BN827_A580(rrs) MAL9_18S_rRNA(MAL9_18S:rRNA) chab5_18s_rRNA(chab5_18s:rRNA)

TPV:

TOT:	TOT_01r000001 TOT_03r000002

TGO:	TGME49_461470

TET:	TepyoMr49(rns_b)

AAF:	AuanCr001(rrn16S)

PSOJ:

SPAR:

SPRG_30239 SPRG_30244 SPRG_30247

LMA:	LMJF27_rRNA_01 LMJF27_rRNA_02 LMJF27_rRNA_03 LMJF27_rRNA_04 LMJF27_rRNA_05 LMJF27_rRNA_06

LDO:	LDBPK_27rRNA6

Reference

Authors

Shen Z, Zheng J, Chen B, Peng G, Zhang T, Gong S, Zhu Y, Zhang C, Li R, Yang L, Zhou J, Cai T, Jin L, Lu J, Guan MX

Title

Frequency and spectrum of mitochondrial 12S rRNA variants in 440 Han Chinese hearing impaired pediatric subjects from two otology clinics.

Journal

J Transl Med 9:4 (2011)
DOI:10.1186/1479-5876-9-4

Sequence

[hsa:4549]

Reference

Authors

Venema J, Tollervey D

Title

Ribosome synthesis in Saccharomyces cerevisiae.

Journal

Annu Rev Genet 33:261-311 (1999)
DOI:10.1146/annurev.genet.33.1.261

Sequence

[sce:RDN18-1 RDN18-2]

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Gene (408)   
   KEGG GENES (408)   
Literature (2)   
   PubMed (2)   
All databases (417)   

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