KEGG ORTHOLOGY: K01982

KEGG

ORTHOLOGY: K01982

Entry

K01982 RNA KO

Name

LSUrRNA

Definition

large subunit ribosomal RNA

Pathway

Ribosome biogenesis in eukaryotes

Ribosome

Brite

KEGG Orthology (KO) [BR:ko00001]
09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    K01982  LSUrRNA; large subunit ribosomal RNA
   03008 Ribosome biogenesis in eukaryotes
    K01982  LSUrRNA; large subunit ribosomal RNA
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome
    K01982  LSUrRNA; large subunit ribosomal RNA
  09184 RNA family
   03100 Non-coding RNAs
    K01982  LSUrRNA; large subunit ribosomal RNA
Ribosome [BR:ko03011]
Ribosomal RNAs
  Eukaryotes
   K01982  LSUrRNA; large subunit ribosomal RNA
Non-coding RNAs [BR:ko03100]
Ribosomal RNA
  Large subunit rRNA
   K01982  LSUrRNA; large subunit ribosomal RNA

Genes

HSA:	4550(RNR2)

PTR:

PPS:

GGO:

PON:

NLE:

MCC:

MCF:

CSAB:

RRO:

CJC:

SBQ:

MMU:	17725(mt-Rnr2) 236598(Rn28s1)

RNO:	100861535(Rn28s) 170603(Rnr2)

CGE:

NGI:

HGL:

OCU:

CFA:

AML:

UMR:

FCA:

BTA:

BOM:

BIU:

CHX:

OAS:

SSC:

CFR:

CDK:

LVE:

OOR:

ECB:

EPZ:

EAI:

MYB:

MYD:

HAI:

PALE:

LAV:

MDO:

SHR:

OAA:

MGP:

CJO:

APLA:

TGU:

FAB:

PHI:

FPG:

FCH:

CLV:

ASN:

AMJ:

PSS:

CMY:

ACS:

PBI:

GJA:	26044417(APQ53_gr01)

XLA:

XTR:

DRE:	140506(mt-rnr2)

TRU:

TNG:

MZE:	26037632(APK84_gr01)

OLA:

XMA:

SASA:

LCM:

CMK:

BFO:

SPU:

SKO:

DME:	Dmel_CR34094(lrRNA) Dmel_CR45844(28SrRNA:CR45844)

DSE:

DSI:

DYA:

MDE:

AGA:

CQU:

SOC:

TCA:

BMOR:

PXY:

API:

DPX:

CEL:	CELE_F31C3.9(rrn-3.1) l-rRNA

CBR:

BMY:

LOA:

TSP:

CRG:

SMM:

ADF:

HMG:	6904232(lsu-rRNA)

TAD:	TradoM_r01(rnl) TradoM_r02(rnl)

AQU:

ATH:	ArthCr087(rrn23S) ArthCr089 ArthMr001(rrn26)

EUS:	ASK66_gr002(rrn23S) ASK66_gr007(rrn23S)

BNA:	11542100(rrn23S) 4237953(rrn26)

CIT:	4271152(CisiCr007) 4271178(CisiCr002)

GRA:	11538529(A6772_cr002) 11538541(A6772_cr007) 27429563(rrn26) 27429586(rrn26)

EGR:	9829711(rrn23) 9845767(EucgrC_r007)

GMX:	15308569(rrnL) 3989348(rrn23) 3989371(rrn23)

PVU:	PhvuCr108(rrn23) PhvuCr118(rrn23)

CAM:	6797497(CiarC_r002)

FVE:	10251573(rrn23) 10251596(rrn23)

PMUM:

18681167(CP95_r007) 18681173(CP95_r002)

MDM:	13630222(26rrn) 13630223(26rrn)

CSV:	11123881(rrnL) 11123916(rrnL) 3429367(23SrRNA) 3429368(23SrRNA)

RCU:	10221390(rrn26) 11542372(rrn23) 11542395(rrn23)

JCU:	7636394(rrn23) 7636405(rrn23)

VVI:	4025070(ViviCr002) 4025079(ViviCr007) 7498722(26Srrn)

SLY:	3950431(LyesC2r002) 3950432(LyesC2r007)

SOT:	4099938(SotuCr002) 4099943(SotuCr007)

INI:	29200393(rrnL) 29200425(rrn23) 29200428(rrn23)

SIND:

11452467(rrn23) 11452491(rrn23)

BVG:	809469(rrn26) 809541(rrn26) 809567(rrn26)

NNU:	20964224(rrn23) 20964235(rrn23) 28482640(rRNA26) 28482679(rRNA26)

OSA:	3131367(OrsajCr114) 3131377(OrsajCr119) 6450145(rrn26)

BDI:	6439784(BrdiC_r002) 6439831(BrdiC_r007)

ZMA:	100275739 1466351(ZemaCr114) 1466356(ZemaCr119)

SITA:

19526841(W841_r002) 19526863(W841_r007)

PDA:	26S_rRNA 8890584(rrn23) 8890609(rrn23)

EGU:	12079453(rrn23) 12079480(rrn23)

ATR:	2546493(AmtrCr002) 2546556(rrn23S)

SMO:	SemoP_r002(rrn23) SemoP_r007(rrn23)

CRE:	ChreCr004(rrnL) ChreCr007(rrnL)

CSL:	CospCoM_r01(rrnL) CospP_r001(rrl)

CVR:	ChvaP_r001(rrnL) OJ20_r02(rrnL)

APRO:

CP73_r001(rrn23) ChprMr001(rnl)

OTA:	OstapCr02(rrl) OstapCr05(rrl) OstapMr03(rrl) OstapMr04(rrl)

BPG:	Bathy11g00175 Bathy11g00695 BathyCg00222 BathyMg00102 BathyMg00246

MIS:	MicpuN_chl56(rrl2) MicpuN_chl9(rrl1) MicpuN_mit11(rrl_1) MicpuN_mit41(rrl_2)

CME:	CYME_CMQ303R CYME_CMQ403R CYME_CMR206R CymeCr211(rrn23)

GSL:	JL72_r002(rrn5) JL72_r005(rrn23) JL72_r01(rrnL)

CCP:	CHC_180(rrl) ChcroMr26(rnl)

SCE:	ICR1 Q0158(21S_RRNA) RDN25-1 RDN25-2

ERC:	Ecym_4197 Ecym_4201

KLA:	KllafMr01(lrRNA)

LTH:	KLTH0H13192r KLTH0H13205r KLTH0H13219r

ZRO:	ZYRO0E10100r ZYRO0E10108r ZYRO0E10118r

CGR:	CAGL0L13365r CaglfMr13(21S_rRNA)

NCS:	NCAS_RDN25-1 NCAS_RDN25-2

NDI:	NDAI_RDN25-1

TPF:	TPHA_RDN25-1

TBL:	TBLA_RDN25-1a TBLA_RDN25-2a

TDL:	TDEL_RDN25-1 TDEL_RDN25-2 TDEL_RDN25-3

KAF:	KAFR_RDN25-1(RDN25-1)

DHA:	LSU_rRNA(LSU)

CAL:	CAALFM_CR08810WA(RDN25) CaalfMr16(rnl)

YLI:

PAN:	PoanfMr55(rnl)

FGR:	FGSG_20048 FGSG_20051 FGSG_20053 FGSG_20055 FGSG_20057 FGSG_20073 FGSG_20075 FGSG_20076 FGSG_20082 FGSG_20085 GizefMr17

VDA:	VDAG_20041 VDAG_20043 VDAG_20045

ANI:	ANID_20049(rnl)

ANG:

CIM:	CIMG_15522 CIMG_15524 CIMG_15526 CIMG_15528

PBL:	PAAG_11629 PAAG_11631 PAAG_11633 PAAG_11635 PAAG_12687 PAAG_12688 PAAG_12690

PNO:

SPO:	SPRRNA.47 SPRRNA.48 SPRRNA.49 ScpofMr11

SRE:	PTSG_20009 PTSG_20010 PTSG_20013 PTSG_20030

DDI:	DidioMr42(rnlA)

DFA:	Difao_mr02

PCB:	BN827_A500(rrl) MAL9_28S_rRNA(MAL9_28S:rRNA) chab5_28s_rRNA(chab5_28s:rRNA)

TPV:

TOT:	TOT_01r000002 TOT_03r000001

BBO:	BBOV_VI000030 BBOV_VI000040

TGO:	TGME49_461480

TET:	TepyoMr47(rnl_b_1) TepyoMr50(rnl_b_2)

AAF:	AuanCr002(rrn23S)

PSOJ:

SPAR:

SPRG_30241 SPRG_30242 SPRG_30245 SPRG_30248 SPRG_30252 SPRG_30257 SPRG_30263

Reference

Authors

Poll G, Braun T, Jakovljevic J, Neueder A, Jakob S, Woolford JL Jr, Tschochner H, Milkereit P

Title

rRNA maturation in yeast cells depleted of large ribosomal subunit proteins.

Journal

PLoS One 4:e8249 (2009)
DOI:10.1371/journal.pone.0008249

Reference

Authors

Venema J, Tollervey D

Title

Ribosome synthesis in Saccharomyces cerevisiae.

Journal

Annu Rev Genet 33:261-311 (1999)
DOI:10.1146/annurev.genet.33.1.261

Sequence

[sce:RDN25-1 RDN25-2]

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Gene (376)   
   KEGG GENES (376)   
Literature (2)   
   PubMed (2)   
All databases (385)   

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