KEGG   ORTHOLOGY: K14276
Entry
K14276            RNA       KO                                     

Name
U1snRNA
Definition
U1 spliceosomal RNA
Pathway
ko03013  RNA transport
ko03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ko00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    K14276  U1snRNA; U1 spliceosomal RNA
  09122 Translation
   03013 RNA transport
    K14276  U1snRNA; U1 spliceosomal RNA
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome
    K14276  U1snRNA; U1 spliceosomal RNA
  09184 RNA family
   03100 Non-coding RNAs
    K14276  U1snRNA; U1 spliceosomal RNA
Spliceosome [BR:ko03041]
 Spliceosomal RNAs
  K14276 U1snRNA; U1 spliceosomal RNA
Non-coding RNAs [BR:ko03100]
 Small non-coding RNA
  Small nuclear RNA
   K14276  U1snRNA; U1 spliceosomal RNA
Genes
HSA: 101954264(RNVU1-4) 101954268(RNVU1-20) 101954273(RNVU1-1) 26863(RNVU1-18) 26864(RNVU1-7) 26869(RNU1-3) 26870(RNU1-2) 26871(RNU1-1) 6060(RNU1-4)
PTR: 112205469 112205480 112207615
GGO: 115930684 115932676
PON: 112128908 112130806
NLE: 115833899
MCC: 114674671 114674674
RRO: 115892423 115892428 115894101
MMU: 115487842(Gm22068) 115488077 115490484(Gm22155)
CGE: 113831800
VVP: 112915073 112918196 112926608
DRO: 112296623
LAV: 111748545
TMU: 111819405
SHR: 111719713
GGA: 112532220
APLA: 113843385
LSR: 116183512
SCAN: 115485015
CCAE: 111927520
FCH: 114014345
ACUN: 113490184
ASN: 112548993
XLA: 100335115
XTR: 116408489
PHYP: 113529413
EEE: 113585096
TRU: 105417574
KMR: 112451508
AOCE: 111579462
OTW: 112235223
SFM: 114909978
CIN: 113474884
DME: Dmel_CR31341(snRNA:U1:95Ca)
DER: 6541407
DYA: Dyak_GE27240(Dyak_snRNA:U1:1)
DAN: 6508053
DPO: Dpse_GA29979(Dpse_snRNA:U1:7)
DPE: 6587655
DWI: 6646999
DGR: Dgri_GH25887(Dgri_snRNA:U1:2)
DMO: Dmoj_GI25445(Dmoj_snRNA:U1:1)
DNV: 115561892
DHE: 111594355
DVI: 116651957
LCQ: 111677286
AALB: 115262833
SOC: 113003222
OBO: 113562680
NVI: 116416677
API: 115034351
AGS: 114125921
RMD: 113550744
CSCU: 111618339
LAK: 112042309
PDAM: 113672059
PSOM: 113336972
SCE: snR19
LTH: KLTH0B08184r(SNR19)
ZRO: ZYRO0F15246r(SNR19)
CGR: CAGL0K05063r(SNR19)
 » show all
Reference
PMID:3056718
  Authors
Seraphin B, Kretzner L, Rosbash M
  Title
A U1 snRNA:pre-mRNA base pairing interaction is required early in yeast spliceosome assembly but does not uniquely define the 5' cleavage site.
  Journal
EMBO J 7:2533-8 (1988)
DOI:10.1002/j.1460-2075.1988.tb03101.x
Reference
PMID:6085956
  Authors
Denison RA, Weiner AM
  Title
Human U1 RNA pseudogenes may be generated by both DNA- and RNA-mediated mechanisms.
  Journal
Mol Cell Biol 2:815-28 (1982)
DOI:10.1128/mcb.2.7.815
  Sequence

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