KEGG   ORTHOLOGY: K14277
Entry
K14277            RNA       KO                                     

Name
U2snRNA
Definition
U2 spliceosomal RNA
Pathway
ko03013  RNA transport
ko03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ko00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    K14277  U2snRNA; U2 spliceosomal RNA
  09122 Translation
   03013 RNA transport
    K14277  U2snRNA; U2 spliceosomal RNA
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome
    K14277  U2snRNA; U2 spliceosomal RNA
  09184 RNA family
   03100 Non-coding RNAs
    K14277  U2snRNA; U2 spliceosomal RNA
Spliceosome [BR:ko03041]
 Spliceosomal RNAs
  K14277 U2snRNA; U2 spliceosomal RNA
Non-coding RNAs [BR:ko03100]
 Small non-coding RNA
  Small nuclear RNA
   K14277  U2snRNA; U2 spliceosomal RNA
Genes
HSA: 6066(RNU2-1)
PTR: 112204499 112204942
GGO: 115935930 115936155 115936417
PON: 112129838 112129839 112135057 112135363 112135682
NLE: 115834606 115836110
MCC: 114672940 114673345 114675879 114675880
RRO: 115893807 115894116 115895062 115896741
MMU: 115487687(Gm23472) 115487916 115489412 115489416 19848(Rnu2-10)
CGE: 113833639 113833640 113833641
VVP: 112910694
UAH: 113249703
AJU: 113597107
BBUB: 112584173
PCAD: 112066623
DRO: 112298959
SHR: 111719720
MGP: 116216217
CJO: 116652593
APLA: 113841406
SCAN: 115484757
CCAE: 111942370
ETL: 114072723
FCH: 114014990
ACUN: 113478962
ASN: 112549722
PBI: 112542010
PMUR: 114923920
PMUA: 114587243
XLA: 100335128(rnu2)
XTR: 116407389
PHYP: 113540713
EEE: 113585098
MZE: 111501435
ONL: 112842301
XMA: 111605935
KMR: 112451478
AOCE: 111579476
SLAL: 111671373
OTW: 112238887
SALP: 111976191
ELS: 114829640
PKI: 111832783
SPU: 115917722 619205(U2)
DME: Dmel_CR31850(snRNA:U2:34ABa) Dmel_CR31854(snRNA:U2:34ABb) Dmel_CR32878(snRNA:U2:38ABb) Dmel_CR32882(snRNA:U2:38ABa) Dmel_CR32913(snRNA:U2:14B) Dmel_CR33788(snRNA:U2:34ABc)
DYA: Dyak_GE27256(Dyak_snRNA:U2:4)
DAN: 6508063
DPO: Dpse_GA29982(Dpse_snRNA:U2:1) Dpse_GA29983(Dpse_snRNA:U2:2) Dpse_GA29984(Dpse_snRNA:U2:3) Dpse_GA29985(Dpse_snRNA:U2:4) Dpse_GA29986(Dpse_snRNA:U2:5) Dpse_GA29987(Dpse_snRNA:U2:6) Dpse_GA29988(Dpse_snRNA:U2:7)
DWI: 6642161
DGR: Dgri_GH25895(Dgri_snRNA:U2:1) Dgri_GH25896(Dgri_snRNA:U2:2) Dgri_GH25897(Dgri_snRNA:U2:3) Dgri_GH25898(Dgri_snRNA:U2:4) Dgri_GH25899(Dgri_snRNA:U2:5) Dgri_GH25900(Dgri_snRNA:U2:6) Dgri_GH25901(Dgri_snRNA:U2:7)
DMO: Dmoj_GI25453(Dmoj_snRNA:U2:1) Dmoj_GI25454(Dmoj_snRNA:U2:2) Dmoj_GI25455(Dmoj_snRNA:U2:3) Dmoj_GI25456(Dmoj_snRNA:U2:4) Dmoj_GI25457(Dmoj_snRNA:U2:5) Dmoj_GI25458(Dmoj_snRNA:U2:6) Dmoj_GI25459(Dmoj_snRNA:U2:7) Dmoj_GI25460(Dmoj_snRNA:U2:8)
DNV: 115562074
DHE: 111591941
DVI: 6623161
LCQ: 111686453
CFO: 112637281
NVI: 116417483
BMAN: 114244487
TNL: 113499124
API: 115034356
AGS: 114129825
CLEC: 112127445
PVM: 113801503
DPTE: 113791446
CSCU: 111618967
PCAN: 112554742
LAK: 112041338
AMIL: 114947595
DGT: 114540842
CIT: 112495671
CMOS: 111436089
CPEP: 111810975
PDA: 113463361
SCE: LSR1
LTH: KLTH0H06138r(SNR20)
ZRO: ZYRO0C14586r(SNR20)
CGR: CAGL0K07175r(SNR20)
DHA: DEHA2D10846r(SNR20)
YLI: YALI0C03391r(SNR20)
 » show all
Reference
  Authors
Yu AT, Ge J, Yu YT
  Title
Pseudouridines in spliceosomal snRNAs.
  Journal
Protein Cell 2:712-25 (2011)
DOI:10.1007/s13238-011-1087-1
Reference
  Authors
Baraniskin A, Zaslavska E, Nopel-Dunnebacke S, Ahle G, Seidel S, Schlegel U, Schmiegel W, Hahn S, Schroers R
  Title
Circulating U2 small nuclear RNA fragments as a novel diagnostic biomarker for primary central nervous system lymphoma.
  Journal
Neuro Oncol 18:361-7 (2016)
DOI:10.1093/neuonc/nov144
  Sequence
[hsa:6066]

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