KEGG   ORTHOLOGY: K14279
Entry
K14279            RNA       KO                                     

Name
U5snRNA
Definition
U5 spliceosomal RNA
Pathway
ko03013  RNA transport
ko03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ko00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    K14279  U5snRNA; U5 spliceosomal RNA
  09122 Translation
   03013 RNA transport
    K14279  U5snRNA; U5 spliceosomal RNA
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome
    K14279  U5snRNA; U5 spliceosomal RNA
  09184 RNA family
   03100 Non-coding RNAs
    K14279  U5snRNA; U5 spliceosomal RNA
Spliceosome [BR:ko03041]
 Spliceosomal RNAs
  K14279 U5snRNA; U5 spliceosomal RNA
Non-coding RNAs [BR:ko03100]
 Small non-coding RNA
  Small nuclear RNA
   K14279  U5snRNA; U5 spliceosomal RNA
Genes
HSA: 26831(RNU5A-1)
PTR: 112204343 112205798 112205799
GGO: 115930987 115930988 115935748
PON: 112129308 112129309 112130892 112134859
NLE: 115835808 115836562
MCC: 114680080 114680555
RRO: 115892448 115897754 115899862
MMU: 115487325(Gm25313) 115487699 115490088(Gm23143) 115490089(Gm25099) 97418(Rnu5g)
CGE: 113833020 113835234 113835235 113836118
VVP: 112915081 112918291
APLA: 113844399
TGU: 115496318
FCH: 114015395
ACUN: 113483194
PHYP: 113546885
EEE: 113585253
ONL: 112847733
SLAL: 111665116
DME: Dmel_CR32880(snRNA:U5:38ABb) Dmel_CR32881(snRNA:U5:38ABa) Dmel_CR32914(snRNA:U5:14B)
DYA: Dyak_GE27269(Dyak_snRNA:U5:5) Dyak_GE27270(Dyak_snRNA:U5:6) Dyak_GE27271(Dyak_snRNA:U5:7)
DPO: Dpse_GA29993(Dpse_snRNA:U5:1)
DPE: 6594925
DGR: Dgri_GH25906(Dgri_snRNA:U5:1) Dgri_GH25907(Dgri_snRNA:U5:2) Dgri_GH25909(Dgri_snRNA:U5:4) Dgri_GH25910(Dgri_snRNA:U5:5) Dgri_GH25911(Dgri_snRNA:U5:6)
DMO: Dmoj_GI25465(Dmoj_snRNA:U5:1) Dmoj_GI25466(Dmoj_snRNA:U5:2) Dmoj_GI25467(Dmoj_snRNA:U5:3)
LCQ: 111691090
BIM: 112213397
CCAL: 113464546
OBB: 114875025
MPHA: 114254353
NVI: 116417500
API: 115033491
LTH: KLTH0C01914r(SNR7)
ZRO: ZYRO0B15334r(SNR7)
CGR: CAGL0B02137r(SNR7)
DHA: DEHA2B02662r(SNR7)
YLI: YALI0F10145r(SNR7)
 » show all
Reference
  Authors
Yu AT, Ge J, Yu YT
  Title
Pseudouridines in spliceosomal snRNAs.
  Journal
Protein Cell 2:712-25 (2011)
DOI:10.1007/s13238-011-1087-1
Reference
PMID:6200827
  Authors
Branlant C, Krol A, Lazar E, Haendler B, Jacob M, Galego-Dias L, Pousada C
  Title
High evolutionary conservation of the secondary structure and of certain nucleotide sequences of U5 RNA.
  Journal
Nucleic Acids Res 11:8359-67 (1983)
DOI:10.1093/nar/11.23.8359
  Sequence
[hsa:26831]

DBGET integrated database retrieval system