KEGG   ORTHOLOGY: K14280
Entry
K14280            RNA       KO                                     

Name
U6snRNA
Definition
U6 spliceosomal RNA
Pathway
ko03013  RNA transport
ko03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ko00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    K14280  U6snRNA; U6 spliceosomal RNA
  09122 Translation
   03013 RNA transport
    K14280  U6snRNA; U6 spliceosomal RNA
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome
    K14280  U6snRNA; U6 spliceosomal RNA
  09184 RNA family
   03100 Non-coding RNAs
    K14280  U6snRNA; U6 spliceosomal RNA
Spliceosome [BR:ko03041]
 Spliceosomal RNAs
  K14280 U6snRNA; U6 spliceosomal RNA
Non-coding RNAs [BR:ko03100]
 Small non-coding RNA
  Small nuclear RNA
   K14280  U6snRNA; U6 spliceosomal RNA
Genes
HSA: 101954271(RNU6-9) 26827(RNU6-1)
PTR: 112205800 112209988
GGO: 115930396 115930505 115935557
PON: 112129311 112133343 112134555
NLE: 115831098 115831100 115834854
MCC: 114671252 114671675 114677162
RRO: 115892451 115892452 115898415
MMU: 115486786(Gm25790) 115486848(Gm24464) 115487553(Gm22623)
CGE: 113832801 113833647 113836576
VVP: 112921494 112921882
GGA: 112530043
TGU: 115490921
SCAN: 115484689
CCAE: 111937596
FCH: 114017306
PSS: 112545286
PBI: 112541418
XTR: 100335113
PHYP: 113537218
EEE: 113567692
TRU: 115246713
MZE: 111500842
ONL: 112847594
KMR: 112450052
AOCE: 111571429
SLAL: 111644339
OTW: 112219270
SALP: 112073428
ELS: 114830100
SFM: 114910775
PKI: 111846442
CIN: 113474324
SPU: 115927792
DME: Dmel_CR31379(snRNA:U6:96Aa) Dmel_CR31539(snRNA:U6:96Ac) Dmel_CR32867(snRNA:U6:96Ab)
DER: 6554676
DYA: Dyak_GE27273(Dyak_snRNA:U6:1)
DPO: Dpse_GA30000(Dpse_snRNA:U6:1) Dpse_GA30001(Dpse_snRNA:U6:2) Dpse_GA30002(Dpse_snRNA:U6:3)
DPE: 6594259
DGR: Dgri_GH25913(Dgri_snRNA:U6:1) Dgri_GH25914(Dgri_snRNA:U6:2) Dgri_GH25915(Dgri_snRNA:U6:3)
DMO: Dmoj_GI25471(Dmoj_snRNA:U6:1) Dmoj_GI25472(Dmoj_snRNA:U6:2) Dmoj_GI25473(Dmoj_snRNA:U6:3)
DNV: 115562999
DHE: 111592401
LCQ: 111684670
AME: 113218703
BIM: 112213159
CCAL: 113464151
OBB: 114874857
SOC: 113003465
HST: 112588284
CFO: 112638565
OBO: 113562223
BMAN: 114241273
AGS: 114120274
RMD: 113555337
CLEC: 112127373
PVM: 113818385
TUT: 112538845
DPTE: 113792399
CEL: CELE_C28A5.7(C28A5.7) CELE_K09B11.19(K09B11.19)
PCAN: 112554745
LAK: 112041419
AMIL: 114957425
PDAM: 113679634
DGT: 114516393
PSOM: 113343067
SCE: snR6
LTH: KLTH0G12804r(SNR6)
ZRO: ZYRO0D06292r(SNR6)
CGR: CAGL0M11652r(SNR6)
DHA: DEHA2D15774r(SNR6)
YLI: YALI0F07549r(SNR6)
 » show all
Reference
  Authors
Yu AT, Ge J, Yu YT
  Title
Pseudouridines in spliceosomal snRNAs.
  Journal
Protein Cell 2:712-25 (2011)
DOI:10.1007/s13238-011-1087-1
Reference
PMID:3360322
  Authors
Kunkel GR, Pederson T
  Title
Upstream elements required for efficient transcription of a human U6 RNA gene resemble those of U1 and U2 genes even though a different polymerase is used.
  Journal
Genes Dev 2:196-204 (1988)
DOI:10.1101/gad.2.2.196
  Sequence
[hsa:26827]

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