KEGG T01821: TC41

Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1: TC41_1546

Entry

TC41_1546         CDS       T01821

Name

(GenBank) Ku protein

K10979

DNA end-binding protein Ku

Organism

aad Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1

Pathway

aad03450

Non-homologous end-joining

Brite

KEGG Orthology (KO) [BR:aad00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    TC41_1546
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aad03400]
    TC41_1546
DNA repair and recombination proteins [BR:aad03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     TC41_1546

SSDB

Motif

Pfam:

Other DBs

NCBI-ProteinID:

AEJ43478

UniProt:

F8IJW6

Position

complement(1520114..1520938)

AA seq 274 aa
MHAMWRGSVSFGLVNIPVRLYKATETGGIHFRQLHRTCRTPISYRKFCPRCQAEVSQDEI
VRGFEYAKGEFVVVEDDDLAAFQGRRGETIDLVQFADAGEIDPVMFQGAYYLAPEASGKK
AYRLLWQALRASGRVGVARMTLRSAESLVLVRASEADGNVLVVHTLAWPEDVRSTGELPY
VREAVEIDANELEVAETLIRQLTKPFVPNEYRDESRARLEAWIAERRGEAGTERPGAPSS
GEVVDLMEALKKSLQLAKQAEKPQESKRKKRKTS

NT seq 825 nt +upstreamnt +downstreamnt
atgcacgcgatgtggcgaggatcggtgagctttggactcgtgaacatcccggtgcggctg
tacaaagcgacggagacaggcgggattcactttcggcagcttcacaggacctgtcggacg
ccgatatcctacaggaagttttgccctcgttgtcaggcggaagtgagccaggacgagatc
gtccgaggatttgaatacgcgaagggcgaattcgtcgtggtggaagacgacgatctcgcc
gcatttcaaggtcgccgcggggagaccatcgatctcgtccagttcgccgacgcgggcgag
atcgacccggtgatgtttcagggcgcgtactacctcgcccccgaggcgagcgggaagaag
gcgtaccgccttttgtggcaagcgcttcgggcgtcaggccgcgtcggcgtagcccggatg
acgctgcggagcgcggaatcgctcgtgctggtgagggcgagcgaggcggatgggaacgtg
ttggtggtgcacacgctcgcctggccggaggacgtgcgatcgaccggcgaacttccgtat
gtgcgggaagctgtggagatcgatgcgaatgagttggaagtcgcggagaccttgattcgg
caactgaccaagccgtttgtgccgaacgagtatcgagacgagagcagggcgcggttggag
gcttggatcgccgagcggcgcggcgaggcggggacggagaggccgggcgccccgtcgtcg
ggcgaggtcgtggacctgatggaggcgctcaagaagagcctgcagctcgccaaacaggcg
gagaagcctcaggagagcaagcgcaagaagcggaagacgtcgtga

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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