KEGG   Aureococcus anophagefferens: AURANDRAFT_52680
Entry
AURANDRAFT_52680  CDS       T04134                                 
Name
(RefSeq) hypothetical protein
  KO
K06063  SNW domain-containing protein 1
Organism
aaf  Aureococcus anophagefferens
Pathway
aaf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aaf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AURANDRAFT_52680
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aaf03041]
    AURANDRAFT_52680
Spliceosome [BR:aaf03041]
 Complex B
  Other components
   Prp19-related factors
    AURANDRAFT_52680
 Complex C
    AURANDRAFT_52680
SSDB
Motif
Pfam: SKIP_SNW
Other DBs
NCBI-GeneID: 20222229
NCBI-ProteinID: XP_009034306
JGI: Auran1_52680
UniProt: F0Y2K4
Position
Unknown
AA seq 564 aa
MSSVAPGQALSRALPTPAREYVVWKDEDKRKKSAPGTARTTAKIPGYGSRRGFVPRSLGD
FGDGGAYPEVHVAQYPLGMGTKEEARSSSTAVVALEVGEDGAVKYDAIVKQGENKGRIVQ
TSLEDVKEKEGAEDALALPSAEAEAAAAQRTQAALGAILDGKINSAKPTHVPEACDPNRQ
KATFVRYTPNPSAPGYSASASQRIVKLVDQQVDPMAPPKHKHTKIPRGPPSPPVPVPVPV
LHSPPRKVTVHDQQSWKIPPCVSNWKNARGYTIPLDKRLAADGRGLQEQTVNNDFATLAE
ALYIAERSARDDVRARAQIRNSNALREKEAQEARLRDLAASARDERAKLADRRGGAAAPR
PRDDGAAAFFGDDGDELLGGGADEDPAVAAGRAEREQVRVERKRDRERQMRLDNAKGDMK
RSRLERERDRDVSEKVALGLLKGTAKLAGEAQFDKRLFNQSSGMDSGFGDDGDYNVYSKP
LLDREDATAIYRPREADAGKYGDGDAQLADLTASSKFAAPERGFAGTAGAGPRSRDKPVQ
FEAQKEEADPFGLDAFLTDVKNKQ
NT seq 1695 nt   +upstreamnt  +downstreamnt
atgtcgtccgtcgcgcccggccaggcgttgagccgggccctgccgacgccggcgcgcgag
tacgtcgtgtggaaggacgaggacaagcggaagaagagcgcccccggtacggcgcggacg
acggcgaagatcccgggctacgggtcgcggcggggcttcgtgccgcggtcgctcggcgac
ttcggcgacggcggcgcgtaccccgaggtccacgtcgcgcagtaccccctgggcatgggc
acgaaggaggaggcgcggtcgtcgtcgacggccgtcgtcgccctcgaggtcggcgaggac
ggcgccgtcaagtacgacgcgatcgtgaagcagggcgagaacaaggggcggatcgtgcag
acgtcgctcgaggacgtcaaggagaaggagggcgcggaggacgcgctcgcgctgccgagc
gccgaggccgaggcggcggccgcccagcgcacgcaggcggccctgggcgcgatcctcgac
ggcaagatcaactcggcgaagccgacgcacgtgcccgaggcgtgcgacccgaaccggcag
aaggcgacgttcgtgcgctacacgccgaacccgagcgcgccgggctacagcgcgtcggcc
tcccagcgcatcgtcaagctcgtcgaccagcaggtcgaccccatggcgccgccgaagcac
aagcacacgaagatcccgcgcggcccgccgagcccgccggtgcccgtgccggtgcccgtg
ctccactcgccgccgcgcaaggtcacggtccacgaccagcagtcctggaagatcccgccc
tgcgtgtccaactggaagaacgcgcggggctacaccatccccctcgacaagcgcctcgcc
gcggacggccgcggcctccaggagcagacggtgaacaacgacttcgcgacgctggcggag
gcgctctacatcgccgagcggtccgcgcgcgacgacgtgcgcgcgcgcgcgcagatccgc
aactcgaacgcgctccgggagaaggaggcccaggaggcgcggctccgcgacctcgcggcg
tccgcgcgcgacgagcgggccaagctcgcggaccggcgcggcggcgccgcggcgccgcgg
ccgcgcgacgacggcgccgcggccttcttcggcgacgacggcgacgagctgctcggcggc
ggcgccgacgaggacccggccgtcgccgcgggccgcgcggagcgcgagcaggtccgcgtc
gagcggaagcgcgaccgcgagcggcagatgcgcctcgacaacgccaagggcgacatgaag
cggagccgcctcgagcgcgagcgcgaccgcgacgtctccgagaaggtcgcgctggggctg
ctcaagggcacggcgaagctcgcgggcgaggcgcagttcgacaagcggctcttcaaccag
tcctcgggcatggacagcggcttcggcgacgacggcgactacaacgtctactcgaagccc
ctgctcgaccgcgaggacgcgacggccatctaccgcccgcgcgaggccgacgcgggcaag
tacggcgacggcgacgcgcagctcgcggatctgaccgcgtcgtccaagttcgccgcgccc
gagcggggcttcgcgggcacggcgggcgccggcccgcggagccgcgacaagcccgtccag
ttcgaggcgcagaaggaggaggcggaccccttcggcctcgacgcgttcctcacggacgtc
aagaacaagcagtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (269)   
   KEGG ORTHOLOGY (1)   
   RefGene (264)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (277)   

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