KEGG   Aedes aegypti (yellow fever mosquito): 5571065
Entry
5571065           CDS       T01053                                 
Name
(RefSeq) 5'-3' exoribonuclease 1
  KO
K12618  5'-3' exoribonuclease 1 [EC:3.1.13.-]
Organism
aag  Aedes aegypti (yellow fever mosquito)
Pathway
aag03008  Ribosome biogenesis in eukaryotes
aag03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aag00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    5571065
  09123 Folding, sorting and degradation
   03018 RNA degradation
    5571065
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aag03019]
    5571065
   03009 Ribosome biogenesis [BR:aag03009]
    5571065
   03016 Transfer RNA biogenesis [BR:aag03016]
    5571065
   03036 Chromosome and associated proteins [BR:aag03036]
    5571065
Messenger RNA biogenesis [BR:aag03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     5571065
  mRNA degradation factors
   5'-3' decay
    5' exonucleases
     5571065
Ribosome biogenesis [BR:aag03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    5571065
Transfer RNA biogenesis [BR:aag03016]
 Eukaryotic type
  tRNA degradation factors
   Rapid tRNA decay (RTD) pathway factors
    5571065
Chromosome and associated proteins [BR:aag03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    5571065
SSDB
Motif
Pfam: XRN_N XRN_M XRN1_D2_D3 XRN1_D1 SH3_12
Other DBs
NCBI-GeneID: 5571065
NCBI-ProteinID: XP_021709659
Position
3:complement(133254571..133276300)
AA seq 1666 aa
MGVPKFFRYISERYPCLSELIRENQVPDFDNLYLDMNGIIHNCSHPNDSDVFFRITEEKI
FSDIFHYLEFLFRMIRPQKLFFIAVDGVAPRAKMNQQRGRRFRSAREAQEQAEEAQKKGE
VLPTEARFDSNCITPGTSFMVRLQKALEHFIKVKVSTNPLWKHCKVILSGHETPGEGEHK
IMEYIRYAKSQPDFDSNTRHCLYGLDADLVMLGLCTHEKHFSLLREEVKFGKNDKKSSIV
EETRFYLLHLTLMREYLELEFAPVRDKLKFEFNIYKLIDDWVLMGYMVGNDFIPHLPHLH
INENALPTLFQAYMDILPTLDGYINEGGILNMPRLEVLMNRLARFDRDIFLENYTDLQYF
KSKRAHNDTEAFDVIIDDIKAEAEMDCDLSALIKASEDMFSDDEDDAEPPGDIENDPEFF
EKEFTAYKRNYYITKLGYQDYNQATRDEQTECYIRALQWTLLYYYRGVPSWAWYYPHHYA
PFISDLQNISSLKLNFEPGKPFLPFQQLLSVLPTASKDHLPSAYHKLMTDPNSPVVDYYP
ENFETDLNGKQQAWEAVVLIPFIDEKRLLKAMEPCDAFLTDEEKQRNVHGPMLVFQYDSK
GTKQLPACYGFEEIEQLKVKESAIYRDQLHVASNKLVLGPSKGAILDGYIKGFPTMKHLQ
YHGIIKEVRVKVFNFPSRNSSMVVVIDRPLKDSEKTTEMLARELLGRIVYVSWPHLTEAK
VVKVADAQVIFEKDREPRENNDKFFDTCSKAIVEHHNNRLAIDLGKISQMVHVKTCVGSE
YVLKENRYVLNKLWNMGETMYPVQAIVTDLKEALKTLKPYQEIREMFPENCLVFLRATQW
YGSLGHVIDVTAGHKRIKTRFEIHEEPNLDKVVDINEEAKSHYLTMQDAASMIGISANLL
SRLSSTIYMMRGARRSVNIDEGGKMNIGLQLRMVTQDVETVGYTRKVHKSWMFSEKAVEL
IKSYHEKVPNLFERLEHFGKGDILFEDEVFGEQKEGAVGLKELIAWIKSQDHAKAEKRSC
GTKMLEPNAVEELVKIVDEQATKLPTMQTMFVHPKDLYKPGMKQAKSIDHQANYELLDRV
IIARDTEVVPLGYRGTIIGIHLAKDPNPVRQESIVAKSDKYFDVLFDKEFPNGVQIFGIS
ATKNRVVRVAEGAVLNISFGTADLEYKQVDPSQPIILPAEEFINRNNQHAQHQRKHELVR
IFPPKPTPTAESIKKRLNERIEKKNPNKAFILANRKPLEESISSDPNAQTACDFEKLWNK
LRESSQAPSTFDDRDIKSFISKNSIPPPPLKTAIDVVPEKNAADTSTEENSVKDPSDMLR
KMLRINSQDETAISSGVPNGVVPTNNEGILNTLVPAIPAVPPVVNIPMPKNLPKPPSSWR
SPKKSSNDEQVTKTKSQNSTASTTANVPTTKDAPKPPHRNAIPNHYPYVAQHPPNVPHHQ
PLFMPFPPFNIPHNRIYPAGPPIPAYPNQLHPMPRYQQAPQAHMHQQQLYNPQYSNNNPG
HNSNNHRQRGPKGPQNLSFNRNTPAGTGAFVPLQAMINSKNRNNNSTATSTPSSGTGSKK
QPPNPAATVFVQKNAEHRQMVEQKQEEVKQSFASFMADSVSKVDESVIPASKQQQQQHVP
LENTSDKEENVDHCESGSNLNEVNPSTAQPCKQRQMRIAARFTHAE
NT seq 5001 nt   +upstreamnt  +downstreamnt
atgggagttccgaagttcttccgctacatcagcgagcgctatccgtgcctgagcgagctg
attcgtgaaaatcaggtgccagacttcgacaatctctacctggacatgaatggcatcatc
cataactgttcgcatcccaatgattcggacgtgttcttccggattacggaggaaaaaata
ttcagcgacatattccattacttggaatttctgttccggatgatccgtccgcagaagtta
ttcttcatcgccgtcgacggagtggctccacgggctaaaatgaaccagcaacgaggacgt
cgtttccggtcagcccgcgaagcgcaagaacaagcagaagaagcccagaagaagggagaa
gttctaccgacagaggctaggttcgatagtaactgcatcacgcccggtacaagctttatg
gttcggctccagaaggcactggagcatttcattaaggtaaaggttagcacaaaccctctg
tggaaacactgtaaggtgattctaagcggacatgaaactcccggagaaggagaacataaa
atcatggaatacattagatacgcaaagtcacagccagattttgattccaatacgcgtcac
tgtctttatggcttggatgctgatttagttatgctgggactttgcactcacgaaaaacat
ttttctctactgagagaagaggtaaagtttggtaagaatgacaaaaagtcaagcattgtc
gaagaaactcgtttctacttgctacatttgacgttgatgcgagaatacttggaactcgag
tttgctcctgttcgggacaagctaaagttcgagttcaacatctacaagctgatagatgac
tgggtgctgatgggctacatggtgggcaatgatttcatcccacacctgccacatttgcat
atcaacgaaaacgcgcttccgacactgttccaagcgtacatggacattttgcccaccctg
gatggatatattaatgaaggaggcatactgaatatgccacgtttagaagtgctgatgaac
cgtctggcacgtttcgacagagatatatttctcgagaactacaccgatttgcagtacttc
aagtcaaaacgagctcacaacgatactgaagcgtttgatgtgatcatagatgatataaaa
gccgaagcggaaatggactgtgatctttcggcccttatcaaggcatcggaagatatgttc
tcggacgatgaggacgatgcagaaccaccaggtgacattgaaaacgatcctgagtttttc
gagaaggaattcaccgcgtataaaagaaactattatatcaccaaactaggttatcaagac
tataatcaagcaactcgcgacgagcaaactgaatgctacataagagcccttcagtggacg
cttctctactactatcggggagtaccatcgtgggcttggtactatccccatcactacgct
ccgttcattagcgatctgcaaaacatcagtagtctgaagctgaatttcgaaccgggaaaa
ccgttcctcccgtttcaacagttgttgagcgtattaccaacagccagtaaagaccatctt
cccagtgcgtaccacaagctcatgaccgatccgaacagtcccgtggtggactactacccg
gagaatttcgaaaccgatctcaacgggaagcaacaagcgtgggaagcggtggttcttatt
ccattcattgacgaaaagcgcctcctgaaagctatggaaccgtgcgacgctttccttacg
gatgaggagaaacaacggaacgtacacggaccgatgttggtgtttcagtacgactcgaag
ggcaccaagcagcttcctgcatgctacggattcgaagaaatcgagcagctgaaagtgaag
gagtctgctatttatcgcgaccagttacacgttgcgagcaataaactcgttctcgggcct
tcgaaaggtgcaattctggatggatacataaaaggcttcccgacaatgaaacatctccaa
tatcatggaataatcaaggaagtgcgagtgaaggtattcaactttccgagtcgaaattcg
agcatggtggtcgtcattgatcgtcccctgaaggacagtgaaaaaacgacagagatgttg
gcacgggaactactcggtcgtatagtgtatgtcagctggccccatctaaccgaggccaag
gtcgttaaggtagcggacgcacaggtaatattcgagaaagatcgtgaaccacgggagaac
aacgataaatttttcgatacctgtagcaaagccatcgttgaacatcacaataaccgattg
gcaatagacttgggcaaaatcagccaaatggttcatgttaaaacttgtgttgggagtgag
tatgtacttaaggaaaatcggtacgtgttgaataagctctggaacatgggggaaactatg
tacccagtgcaggcgatcgtaacggatctgaaagaagcactaaagacactgaagccatat
caggagattcgagaaatgtttcctgaaaactgtctggtgtttttgcgggcaacgcagtgg
tatggaagtttgggtcacgtaatagatgtgaccgcaggccataagcgtatcaagactcga
tttgaaatacacgaagagcccaatctagataaggttgtagacataaatgaagaagccaag
agtcactatttgaccatgcaggacgcggcttcgatgataggcatatcggctaatcttttg
agcaggctttcatcgactatttatatgatgcgaggagcgagacgatcggtcaacatagac
gaaggaggaaagatgaacatcggattgcagctgagaatggtcacacaagatgtggaaacg
gttggttacacccgtaaggtccataagtcttggatgttttcggagaaagcagtcgagcta
atcaaaagctaccacgaaaaagttcctaatttgtttgaaagattggagcatttcggaaaa
ggtgatattctttttgaggatgaggtattcggagaacaaaaggagggtgccgtaggactg
aaagagttgatagcatggattaagagtcaggatcacgcgaaggcagaaaagcgatcttgt
gggacaaaaatgttggaacctaatgccgtagaggagctggtgaagatagtcgatgaacag
gcaaccaaattgcctaccatgcagaccatgtttgtacatccgaaggatctgtacaagccg
ggaatgaaacaggcgaaaagtatcgatcatcaagctaattacgaactgcttgatcgcgtg
attatcgctcgagacactgaggttgttcctctgggttaccggggtacgattatcggaata
cacctcgccaaggatccgaatccggttcgacaagagagtatcgtggccaaaagtgacaaa
tatttcgatgtgttgttcgataaagagtttcccaatggcgttcaaattttcggtatttct
gccacgaagaaccgtgtagtgcgagttgccgaaggagccgtgttgaatatttcattcgga
actgctgacttggaatacaagcaagtagatcccagccagccaatcatactcccggccgaa
gaattcatcaaccgaaataaccagcatgctcaacatcagaggaaacacgagctggtccga
atattccctccaaaaccgacgcctacagcggaatctatcaagaagcgcctgaatgagcga
attgagaagaaaaacccaaataaagcgttcatcctcgccaacaggaaaccgttggaagag
agtataagtagtgatcctaatgcgcaaacagcctgtgattttgaaaaactgtggaataag
ctcagggagtcatcgcaagcgccgtccacctttgacgatcgcgatatcaaaagtttcata
tcgaaaaattcaatccctcctccgccattgaagactgcgatagatgttgtgccagaaaaa
aatgcagctgatacatcgactgaagaaaattcggtgaaagatccttcagatatgctgcga
aagatgctcagaataaacagccaggatgagactgcgatatcttctggtgtacccaatggg
gtagtgcctaccaacaatgaaggcattctaaataccttggtccccgctatacctgcagta
ccgccggtagtcaacattcccatgccaaagaatttgccaaagccaccgtcatcgtggagg
tcacccaaaaagtcgtcaaacgacgaacaagttactaaaacgaaatcacaaaactccaca
gccagcacaaccgcaaatgtcccgacgacgaaagacgcgccaaagcccccgcacagaaat
gctattccaaatcactatccttatgtggcccagcatccgcccaatgttccgcaccatcag
ccgctctttatgccatttccaccgttcaacattccgcacaaccggatttacccggcgggt
ccacccatccccgcataccccaaccagttgcatccaatgcctcgctatcagcaagcaccg
caggctcacatgcatcagcaacagctgtacaatccacagtattcgaataataatcctgga
cacaactcaaacaaccaccggcaacgtggtcccaaaggaccgcagaacctcagcttcaac
aggaacactcccgctggcacaggagccttcgtgccccttcaggccatgatcaactccaaa
aaccggaacaacaattccaccgcaacatccacgccatccagcggaaccggtagcaaaaag
caaccccccaacccagcagcaacggttttcgtgcagaagaatgccgaacatcggcaaatg
gtcgaacagaagcaggaagaggtgaagcaaagcttcgcctcgttcatggccgatagcgtc
agtaaggttgatgaatctgtgatccccgctagcaagcaacaacaacaacaacatgtgccc
ttggaaaacaccagtgataaagaggagaacgtagatcactgcgaaagcggttccaatttg
aatgaggtgaacccgtcaacagcccagccgtgcaaacagcgacagatgagaatagctgcc
aggttcacgcatgccgaataa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (19)   

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