GenomeNet

Database: AAindex
Entry: SKOJ970101
LinkDB: SKOJ970101
H SKOJ970101
D Statistical potential derived by the quasichemical approximation
R PMID:9070450
A Skolnick, J., Jaroszewski, L., Kolinski, A. and Godzik, A.
T Derivation and testing of pair potentials for protein folding.
  When is the quasichemical approximation correct?
J Protein Science 6, 676-688 (1997)
M rows = ARNDCQEGHILKMFPSTWYV, cols = ARNDCQEGHILKMFPSTWYV
   0.8
   0.6 -0.1
   0.9  0.0  0.1
   1.2 -0.5  0.4  0.9
   0.6  0.7  0.6  0.8 -1.3
   0.6  0.2  0.2  0.6  0.3  0.3
   1.2 -0.4  0.5  0.9  0.9  0.8  1.2
   1.2  0.2  0.7  0.8  1.3  0.8  1.1  1.5
   0.4 -0.1  0.2 -0.1  0.1  0.1  0.1  0.7 -0.8
  -0.6 -0.2  0.5  0.5 -0.5  0.1  0.4  0.4 -0.1 -1.4
  -0.3 -0.1  0.4  0.7 -0.4  0.2  0.6  0.4 -0.1 -1.3 -1.2
   1.3  1.1  0.7  0.2  1.3  0.5  0.0  0.9  1.0  0.5  0.5  2.1
  -0.3  0.2  0.3  0.6 -0.3  0.1  0.4  0.5 -0.4 -1.0 -1.0  0.6 -1.1
  -0.2 -0.4  0.1  0.5 -0.6 -0.1  0.4  0.3 -0.4 -1.3 -1.3  0.4 -1.3 -1.5
   0.6  0.1  0.5  0.9  0.4  0.2  0.7  0.8  0.0  0.0  0.0  0.9 -0.2 -0.1  0.4
   0.9  0.2  0.7  0.7  0.6  0.6  0.6  0.8  0.0  0.3  0.4  0.9  0.4  0.1  0.6  0.6
   0.5  0.0  0.3  0.5  0.5  0.4  0.4  0.5  0.1 -0.3  0.0  0.8  0.0 -0.2  0.2  0.4  0.1
  -0.6 -0.6  0.0  0.0 -0.7 -0.4 -0.1  0.0 -0.9 -1.3 -1.4 -0.1 -1.5 -1.5 -0.8 -0.1 -0.2 -1.2
  -0.4 -0.7 -0.2 -0.2 -0.1 -0.3 -0.2  0.1 -0.8 -1.0 -0.9 -0.2 -1.1 -1.0 -0.5  0.1 -0.2 -1.2 -0.8
  -0.4  0.0  0.5  1.0 -0.6  0.2  0.5  0.5  0.0 -1.2 -1.2  0.7 -0.8 -1.1 -0.1  0.4 -0.2 -1.1 -0.8 -1.2
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