KEGG   Aeromonas hydrophila MX16A: BOQ57_11605
Entry
BOQ57_11605       CDS       T04629                                 
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
aaj  Aeromonas hydrophila MX16A
Pathway
aaj03030  DNA replication
aaj03430  Mismatch repair
aaj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:aaj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BOQ57_11605
   03430 Mismatch repair
    BOQ57_11605
   03440 Homologous recombination
    BOQ57_11605
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aaj03032]
    BOQ57_11605
   03400 DNA repair and recombination proteins [BR:aaj03400]
    BOQ57_11605
Enzymes [BR:aaj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BOQ57_11605
DNA replication proteins [BR:aaj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BOQ57_11605
DNA repair and recombination proteins [BR:aaj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BOQ57_11605
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_tau_5 DNA_pol3_gamma3 AAA RuvB_N AAA_16 AAA_22 AAA_5 AAA_14 AAA_18 AAA_2 ResIII nSTAND3 Rad17 AAA_19 TsaE AAA_30 VapE-like_dom SKI TniB Mg_chelatase DUF815 PatG_D Zeta_toxin PIF1 AAA_24 DNA_pol3_delta Herpes_Helicase
Other DBs
NCBI-ProteinID: APJ15523
Position
complement(2469085..2471619)
AA seq 844 aa
MSYQVLARKWRPHTFEQVVGQHHVLTALTNALDQGRLHHAYLLSGTRGVGKTTIARILAK
SLNCEQGISSHPCGVCDTCREIDQGNFVDLLEIDAASRTKVEDTRELLDNVQYRPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPPYVKFLLATTDPQKLPITILSRCLQFHLKSLDQ
TQIAKQLEWVLDQEGQPFEPRALLALAKAADGSMRDALSLTDQALAHGNGSVRLDSVLAM
LGTLDHRHLHQLLEAVLRQDAPATMAKITEIATLGPDFDQLHAELEGLLHRIAMAQLLPA
TVQEQGADADALLQLAQAMSPEEVQLCYQIVLGGRKDLPWAPDGRTALEMTCLRMLAFSP
RREVLHPASLTALPPAMGGLATEARSGAAAPGKPQGAEPAPAASAAPQASSAVAAAAPAA
TIAPVVMAEPAAVEPALERQDNGAELDPLFAEQDELLREAEQMGYEAGTLPAASGDLPAE
PSVAPPSVPVMAESKPESIPQAEVVADAEAVPSTVSSMQSLLGKRNLLRSRLRSEPSAAT
TSVRTAPAKPATVMQPAAATPAPAFEPQPARVDGQGQASARPAPQTGYDDLPPLDAYEES
GSDYEEYLSQGFSDAFASAPLPERTAEALSPAPVPAAVARPQSDDLPPWDLDGSASRQVS
AAPVAAPVTVPREVVASEPVPAVSVMETIDWDELEGDNQPQAGEVAARLIPSSLLNSCGD
PWAELIARTGVGGRLRQLAINSVMSQQGDKVLLTLKPEQRHLISDRARADLAEIIGPELG
QPVQVEVTLGNVPKQETPLEIEHRLYLGVREQVTRDLEQDPNVQFLQQRFGAVLHHDSIE
PLSR
NT seq 2535 nt   +upstreamnt  +downstreamnt
atgagctatcaggttctggcgcgtaaatggcgcccccatacgtttgaacaagtggtaggc
cagcatcatgtgctgaccgccttgaccaacgccctggatcagggacggctgcatcacgcc
tatctgctgagcggcacccgcggggtcggcaagaccaccatcgcccgcatcctggccaag
agcctcaactgcgagcaggggatcagcagccacccgtgcggggtgtgcgacacctgccgc
gagatcgatcagggcaacttcgtcgacctgctggagattgatgcggcgtcgcgcaccaag
gtggaagatacccgcgaactgctcgacaacgtgcagtaccgaccggcccgtggccgcttc
aaggtctatctcatcgacgaagtgcacatgttgtcgcgccacagcttcaacgcgctgctg
aaaaccctggaagagccgcccccctatgtgaagttcctgctggccaccacggatccgcag
aagctgccgatcaccatcctctcgcgctgcctgcagtttcatctgaagagtctggatcag
acccagatcgccaagcagctcgaatgggtgctggatcaggaggggcaaccctttgaaccg
cgcgccctgttggcgctggccaaggcggccgacggcagcatgcgcgatgccctgagtctg
accgatcaggcgctggctcacggcaatggcagcgtgcgcctcgatagcgtgctggccatg
ctgggtacgctcgatcatcgccatctgcaccagctgctggaggcggtgctgcgccaggat
gcaccggccaccatggccaagatcaccgaaattgccaccctgggccccgactttgatcag
ctgcacgccgagctggaaggcttgctccatcgcatcgccatggcgcagctgctgccggcg
actgtgcaggagcagggggcggacgccgatgccctgctgcagctggcccaggccatgagc
ccggaagaggtgcaactctgctatcaaatcgtgctgggcggccgtaaagacttgccttgg
gcaccggatggccgcaccgcgctggagatgacctgcctgcggatgctggccttctcgccc
cggcgtgaagtactgcaccccgccagcctgacggcgctaccccccgccatgggagggttg
gcgacagaggcgagaagtggcgcagcggcgccgggaaagccccagggggctgagccggcc
ccggctgccagtgcagcgccacaggcttcgtctgcggttgcagccgccgcgcctgccgcg
actattgcccctgtggtgatggccgagccagctgctgtcgagccagctttggagagacag
gataacggcgccgagctggatccgctgtttgccgagcaggatgagttgctgcgcgaggcc
gagcagatgggctacgaggcggggacgttgccggccgcgtccggcgacctgccggcagag
ccgtctgtggcacccccttcagtgcctgtcatggccgagtccaagcccgaatcaatcccg
caggccgaggtggtggccgacgcagaggccgttccctcgacggtctccagcatgcaaagc
ctgcttggcaagcgcaatctgctgcgcagtcgtctgcgcagcgaaccgtcggcggcgacc
acctctgtgcgcacggcccccgccaaaccagcaacggtgatgcaacctgccgccgccacg
ccagccccggctttcgagccgcaaccggcgcgggttgatgggcaagggcaggcgtctgcc
cggccagccccgcagacggggtatgacgacttgccgccgctcgatgcctatgaagagagc
ggcagcgactacgaagagtatttgagccaaggtttcagcgatgcgtttgccagcgcacct
ctgccggagcggactgccgaggctttgtcgccggcgcctgttcccgcggccgtggcacgt
cctcagtcagacgatctaccgccctgggatctggacggtagtgcatctcggcaggttagc
gctgcgcctgttgcggctcctgtgacggtccctcgcgaggtcgttgccagcgagccggtg
cctgcggtctcggtgatggagaccatcgactgggacgagctggagggtgacaaccagccg
caagcgggagaagtggcggccagattgatcccgtcctccctgctgaacagctgtggcgat
ccctgggccgagctgattgcccgcaccggtgtcggtggtcggctgcgtcagctggccatc
aactcggtcatgagccagcagggggacaaggtgctgttgaccctcaaaccggagcagcgc
catctgattagcgacagggcgcgcgccgatctggccgagatcatcggccccgagctgggg
caaccggtgcaggtggaggtcacgctgggcaacgtgcctaagcaggaaacgccgctggaa
atagagcaccgcctctatctcggggtgcgtgagcaggtcacccgggatctggagcaggat
cccaacgtgcaatttttgcagcagcgatttggcgccgtgcttcaccacgacagcatagag
ccgctgagtcgctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (28)   
   Pfam (28)   
All databases (40)   

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