KEGG   Aminobacter aminovorans: AA2016_0838
Entry
AA2016_0838       CDS       T04343                                 
Name
(GenBank) Ffh, signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
aak  Aminobacter aminovorans
Pathway
aak02024  Quorum sensing
aak03060  Protein export
aak03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:aak00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    AA2016_0838
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AA2016_0838
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AA2016_0838
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:aak02044]
    AA2016_0838
Enzymes [BR:aak01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     AA2016_0838
Secretion system [BR:aak02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   AA2016_0838
  Eukaryotic Sec-SRP protein
   AA2016_0838
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA AAA_33 Zeta_toxin AAA_30 AAA_31 AAA_22 AAA_19 ATPase ArsA_ATPase AAA_25 6PF2K ResIII DnaB_C APS_kinase AAA_17 ABC_tran AAA_14 Thymidylate_kin AAA_16 MipZ AAA_18 AAA KTI12 AAA_28 AAA_5 NACHT DNA_ligase_OB_2
Other DBs
NCBI-ProteinID: AMS39776
Position
886299..887882
AA seq 527 aa
MFESLQERLGSILNGLTGRGALSEADVSAALREVRRALLEADVALEVVRSFTDKVREKAV
GAAVLKSIKPGQMVVKIVHDELVEMLGAEGVAVDLNAPAPVVIMMVGLQGSGKTTTSAKI
AKRLTERQGKKVLMASLDTRRPAAQEQLRQLGEQTKVATLPVIAGQSPVDIAKRAVQAAK
LGGHDVVILDTAGRTHIDEPLMVEMADIRKVSDPHEILLVADSLTGQDAVNLAKNFDDRV
GITGLVLTRMDGDGRGGAALSMRAVTGKPIKLIGVGEKMDALEEFYPKRIADRILGMGDI
VSLVEKAAETIDAEKAAAMAKKMQSGKFDLNDLADQLGQMQKMGGMGGIMGMMPGMGKMK
DQMAAAGLDDKMFGRQLAIISSMTKAERANPDVLKHSRKKRIAAGSGTDAAEINKLLKMH
RQMADMMKAMGGKGKGGGLMRGMMGGLASKMGLGGMMPGGGMPDLSKMDPKQLEALQKQA
EAAGLGGGLKGLPGGMPGLGGGGLPGLPGGMKLPGLGGGLPGLGKKK
NT seq 1584 nt   +upstreamnt  +downstreamnt
atgtttgaatcgctgcaagagcggcttggatcaatccttaacggcctgaccggccgtggc
gcactgtcggaggccgatgtctcggcagccctgcgcgaggttcgccgtgccctgctcgaa
gcggacgtggcgctggaagtcgtccgctcgttcaccgacaaggtgcgcgagaaggccgtc
ggcgccgccgtcctgaagtcgatcaaacccgggcagatggtcgtcaagatcgtccatgac
gaacttgtcgaaatgcttggcgccgaaggcgtagccgtcgacctcaacgcgcccgctccg
gtcgtcatcatgatggtcggcctgcagggttcgggcaagaccaccacctcggccaagatc
gccaagcgcctcaccgagcgccagggcaagaaggtcctgatggcctcgctcgacacgcgc
cgcccggccgcgcaggagcagctgcgccagctcggcgagcagaccaaggtcgcgaccctt
cccgtcatcgccggccagtcgccggtcgacatcgccaagcgcgccgttcaggcggccaag
ctcggcggccacgacgtcgtcatcctcgacacggccggccgcacccatatcgacgagccg
ctgatggtcgagatggccgacatccgcaaggtgtcggacccgcacgaaatcctgctcgtc
gccgactcgctgaccggccaggatgccgtcaacctcgccaagaatttcgacgaccgcgtc
ggcatcaccggcctggtgctgacccgtatggacggcgacggccgcggcggtgctgcgctg
tcgatgcgcgctgtcaccggcaagccgatcaagctgatcggcgtcggcgaaaagatggat
gcgctggaggagttctatcccaagcgcatcgccgaccgcatcctcggcatgggcgacatc
gtttcgctggtcgagaaggctgccgaaaccatcgacgcggaaaaagccgcggcgatggcc
aagaagatgcagtcgggcaagttcgacctgaacgacctcgccgaccagcttggccagatg
cagaagatgggcggcatgggtggcatcatgggcatgatgcctggcatgggcaagatgaag
gaccagatggccgcggcgggcctggacgacaagatgttcggccgccagcttgccatcatc
tcgtcgatgaccaaggccgagcgtgcgaaccccgacgttctcaagcactcgcgcaagaag
cgcattgccgccggttccggcaccgacgccgccgagatcaacaagctgctcaagatgcat
cgccagatggccgacatgatgaaggccatgggcggcaagggcaaaggcggcggcctcatg
cgcggcatgatgggcggcctggcttccaagatgggcctcggcggcatgatgcctggcggc
ggcatgcccgacctgtccaagatggatcccaagcagctcgaagccctgcagaagcaggcc
gaagccgccggcctcggtggcgggctcaagggtcttccgggcggcatgcctggtctcggc
ggcggtggccttcccggcctgcccggcggcatgaagcttcccggtctcggtggcggcctg
cccggccttggcaagaagaagtga

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