KEGG   Alteromonas australica H 17: EP13_03080
Entry
EP13_03080        CDS       T03220                                 
Name
(GenBank) pseudouridine synthase
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
aal  Alteromonas australica H 17
Brite
KEGG Orthology (KO) [BR:aal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:aal03009]
    EP13_03080
   03016 Transfer RNA biogenesis [BR:aal03016]
    EP13_03080
Enzymes [BR:aal01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     EP13_03080
    5.4.99.29  23S rRNA pseudouridine746 synthase
     EP13_03080
Ribosome biogenesis [BR:aal03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    EP13_03080
Transfer RNA biogenesis [BR:aal03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    EP13_03080
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: AIF97756
UniProt: A0A075NWA5
Position
complement(688083..688787)
AA seq 234 aa
MANPSFVYRPPMSPYLRIVYYDDHILVADKPSGLLSVPGKADEHKDALIGRVNHVFPTAT
VVHRLDMATSGIMVMALNKASHRHISKQFELRQTRKRYFARVFGNVEQAEGEIRLPLICD
WPNRPKQMVDHERGKPAHTRYQTIQQEGDETLVALYPVTGRSHQLRVHMLALGHPILGDR
LYAHEKALAMAPRLQLHAESLCFAHPVTLEAMTFNSPIPFSDYVPKPLFDEIRP
NT seq 705 nt   +upstreamnt  +downstreamnt
atggcgaacccctctttcgtgtaccggcctccaatgtcaccgtatttacgtatagtgtat
tacgatgaccacatcttagtggccgataaacccagcgggttactcagtgtgcctggaaag
gctgacgagcataaagatgccctaatcggccgagtaaaccatgtgtttccaactgcgact
gtcgtgcatcgcttggatatggccacttctggtatcatggtgatggccttgaataaggcc
agtcataggcatatatcgaagcagttcgagcttcgtcaaactcgaaagcgctatttcgct
cgagtgtttggcaacgttgaacaagcagagggcgagataaggctaccgcttatttgcgat
tggcctaaccggccaaagcaaatggtggatcatgaaaggggtaaacctgctcacactcgt
taccaaaccatacaacaagagggtgacgaaacactggtagcgctatatccggtgacaggt
cgctcccaccagcttagggtgcacatgttagcccttggccaccccatattaggtgatagg
ctatacgcccatgagaaggcgctagccatggcgcctaggttgcaactccatgctgaatcg
ctctgttttgcacatccggtaaccctagaagcaatgacatttaatagccctattcctttt
agtgactatgtgcctaagcccctgtttgatgagatcaggccctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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