KEGG   Alteromonas australica H 17: EP13_04165
Entry
EP13_04165        CDS       T03220                                 
Name
(GenBank) exonuclease SbcC
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
aal  Alteromonas australica H 17
Brite
KEGG Orthology (KO) [BR:aal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aal03400]
    EP13_04165
DNA repair and recombination proteins [BR:aal03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     EP13_04165
    Archaeal homologous recombinant proteins
     EP13_04165
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B AAA_29 AAA_21 ABC_tran SMC_N cobW NTPase_1 HrpB7 XhlA nSTAND3 AAA_22 AAA_25
Other DBs
NCBI-ProteinID: AIF97957
UniProt: A0A075P3T1
Position
930229..933966
AA seq 1245 aa
MRILTLRLKNLNALKGEWKIDFTQSPFIDNGLFAITGPTGAGKTTLLDAICLALYHQTPR
LGAISTSNNDIMTRGTAECLAEVEFDIKGKAYRAFWSMRRARGKVDGNLQSADVELAEVE
SGDVLATQVRPKNEEIEKLTGLNFARFTKSMMLSQGDFAAFLNANEGDRAELLEELTGTE
IYGQISQTVHQQFSDAKQKKKEYELKLEGVTLLSDEHVAQLKQEQASTQQRIEAFNKQLA
ELQQQQQWQLAVKSNEQALYDAKQAQNSANDAINGAEQTLARLAQSEPAEKLRVPYLQRN
SLQQDVTRYQNSVNHKAAQLPELQSKKRQLIAAASHAESELNEAKAQTAALEKRIHEHVI
PLDSDIAQHINAQQKANEASQRLTQTLEQLKTHRADTESASAENKSTLATLETFLSEHSA
LLGMAEFMSGWGETARYIDNEQQQLKALTEALSKEREVLATLDGSIEESQQALSVLTDNY
NAEKTRVAHCEQALHAVLSNTSKASLQQERDIKLNHWDNLVQLAHVQQQYLVCEEDKASL
TAQQDALASTLLQQQAERNSLVQAYKATRSNLKDIEALIALDAEVAHLRAQLKSGEPCPV
CGANEHTTSSVTIDVPDTIAKRDITKQQLDDIEQKGAKAKDSVTQTELTLAQVEKQITQA
HSQSEALLVKWHRISNQLCTDIPRFKEVKVDTAQSVEKFTQQFKTRLDEINVQVKHIEQC
EQALNTATQRASQAHTTLQAEQSAHAMNQQQRETLAKQIRERQNELTHKTKAVNEKVAAL
RQDISAHHDSFSASESDATESQAPVMGHILHWLNEKADALKTYKQKQQQRDALKDELQSV
NETLLLIDRDIESAQAQLKEVLTQLTQHEEKLVALRNTRLNIFPEADIDEARSKARKKVD
DAEQQLSDTKAELQNTDNALSRLEAEIAQLNGQMAEKQQALNDATEAFNAKLADSPFSNE
QAFSNALLDEETRMGYVELQKRLTHKKQQADLLVENALATQKSLSAKAHAERWAQSLEHH
GSEWVGLQITEIAQQRDGLLSSLGQLEQQLHANHQAREKQQKLVDEMATFEAYYDDITYL
HSLIGSASGDKFRRFAQGLTLDNLVQLANQQLDKLHGRYQLSRKENEGLGLSVLDTWQGD
VERDTKTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEGFGTLDAETLDVALDALDN
LNASGKMIGVISHIEAMKERIPTQLKVIKRNGVGLSALDARYRVA
NT seq 3738 nt   +upstreamnt  +downstreamnt
atgagaatactgactttacgccttaaaaatctcaatgccctgaaaggagagtggaaaatt
gatttcactcaatcgccttttatcgacaatggtttgttcgcaattaccggccccacgggg
gcaggcaagaccacgttgctagatgccatctgcttggcgttatatcaccaaactcctcgt
cttggtgctatttctacttcgaacaatgacattatgactcgcggcacagccgagtgtttg
gccgaagtagaatttgatattaaaggcaaagcctatcgagcattttggagtatgcgccga
gcgcgaggaaaggttgacggtaacttgcaaagtgctgatgtagagctggcagaagttgaa
agcggcgatgttttagccacgcaagtgagacctaaaaatgaagaaatagaaaaactgacc
ggccttaattttgcgcgctttacaaaatcgatgatgttatcgcagggtgattttgccgcc
tttttaaatgctaatgaaggtgacagagcagagcttttagaagagctgacgggaacagaa
atttacgggcaaatttctcaaacagtgcatcaacaatttagcgatgccaaacaaaagaaa
aaagaatatgaattgaagcttgaaggggttaccttactcagtgatgagcacgttgcacag
ttaaaacaagagcaagccagtacccagcagcggatagaagcatttaataagcaactagcc
gaattgcaacaacagcaacaatggcaacttgcagtaaaaagcaacgaacaggcgctttat
gacgcgaaacaagctcaaaattcagcgaatgatgccattaatggggcagagcaaacgctt
gcgcgtttagcacaaagcgaaccggcagaaaaacttcgtgtgccctacttacagcgcaat
tcacttcaacaggatgttacccgctaccaaaacagtgtgaaccacaaagcagctcaacta
ccggaattgcaaagcaaaaaaaggcagttaattgcagccgctagtcatgctgaatcagaa
cttaatgaagccaaagcgcaaactgcggcccttgaaaagcgtatacatgaacacgtcatt
ccccttgatagtgacatagcgcaacatatcaacgcgcagcaaaaagccaatgaagcatca
cagcgtttaacgcaaacgctagaacagctaaaaacgcaccgtgcggataccgaaagcgct
tcggcggagaataaatcaacgctggcgacattagagaccttcctaagcgagcacagcgca
ttactcggtatggctgaatttatgagtggatggggcgaaaccgctcgctacatagacaac
gagcaacagcaactaaaagcgctaacggaagccttaagtaaagaaagggaagtgctagcc
acactcgatggctcaatagaagaaagtcagcaagcattgagcgtactgacggataattac
aacgctgaaaaaacgagggtagcccactgtgaacaggcgttacacgcagtacttagtaac
actagcaaagccagtttgcagcaagagcgcgatataaagctaaaccattgggataatttg
gtgcagctagcccatgttcaacagcaatatcttgtgtgtgaagaggataaagcgtctctt
accgctcaacaagatgcactcgctagcacgcttttacagcaacaagcagagcgaaacagc
ttagttcaggcgtataaagcaacccgcagtaacttaaaagatattgaggcgcttattgcc
cttgatgcagaagtggctcacttgcgtgcgcaattaaaaagtggagaaccttgcccggta
tgcggggctaatgagcacaccacgtctagcgtgaccatagatgtgccagacaccattgct
aagcgagacatcacgaagcagcagcttgatgacatagaacaaaaaggggccaaggcaaaa
gacagtgtcacgcaaaccgagctgacgcttgcccaagtggaaaagcaaattactcaggct
cactcacaaagtgaggcgctacttgttaaatggcacaggatctcaaaccaactgtgcacc
gatattcctcgttttaaagaggtgaaagtagacactgcccaaagtgtggagaagtttact
cagcagtttaaaacccgtttagatgaaataaatgtgcaggtaaagcatattgagcaatgt
gaacaggcgctcaatactgcaacgcaacgagcgagccaagcacacactactttgcaagct
gaacagtctgcccatgcgatgaatcagcaacagagggagacattggcaaagcaaatacgc
gaacgccaaaatgaattgacgcacaaaaccaaggcggttaacgagaaagtggctgcattg
aggcaagatattagtgcccatcatgattctttttcagcgagcgaaagtgacgctaccgaa
agccaagcaccggtcatgggccatattcttcactggttaaatgaaaaagccgacgcgctt
aaaacctataagcaaaagcaacagcagcgcgacgcacttaaagacgagttgcaaagtgtt
aatgaaacattactgctaatagaccgcgatatcgaaagtgcgcaggcgcaacttaaggaa
gtgttaacccaattaacacagcacgaagagaaattggttgcgctgcggaatacccgccta
aacattttcccggaagctgatattgatgaagctcgaagcaaagcacgaaaaaaagtcgat
gatgcagaacagcaactgagtgacaccaaagcagagctgcaaaatacagataacgcgtta
tcccgtttagaggctgaaattgcgcagctcaatgggcaaatggctgaaaagcaacaggcg
ctcaatgacgccactgaggcttttaacgccaaactggcagacagccccttttccaacgaa
caagctttcagcaatgcgttactcgatgaagaaacccgaatgggctacgttgaacttcaa
aagcgcttaacccataaaaagcagcaggcagacttgttagtagaaaatgcattggccacc
caaaagtcgctgtcagctaaagcgcatgccgaacgctgggcgcagtcgttagaacaccat
ggttcagagtgggtagggctgcaaataactgaaatcgcgcagcaaagagatgggctttta
tcgtcgttagggcaacttgagcaacaacttcacgcgaaccatcaagcccgtgaaaagcag
caaaaactcgtggatgaaatggcaacgtttgaagcctattacgacgacattacctatttg
cattcgcttatcggttcggccagtggagataaattcaggcgtttcgcacagggattaacg
ctagataatcttgttcaattggccaaccagcagctagacaagttgcacggtaggtatcag
ttaagccgtaaagaaaatgagggactgggcttaagcgtgctggatacttggcagggcgat
gtggagcgagacaccaaaactttgtcaggcggagagagctttttagtgagtttagcgttg
gcgctagcgctgtcagacttagtgagccacaaaaccagtatcgactcgctattcctagat
gaaggctttggtaccttagatgctgaaaccttagatgtcgcgctcgacgcgttagacaac
ctgaatgccagcggcaaaatgattggtgtcattagccatattgaagcgatgaaagagcgc
atccccacgcaactaaaagttatcaaacgcaacggggtaggattaagtgcattggatgca
aggtatagggttgcgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (20)   

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