KEGG   Alteromonas australica H 17: EP13_08510
Entry
EP13_08510        CDS       T03220                                 
Name
(GenBank) ribonuclease
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
aal  Alteromonas australica H 17
Pathway
aal03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aal00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EP13_08510
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aal03019]
    EP13_08510
   03009 Ribosome biogenesis [BR:aal03009]
    EP13_08510
Enzymes [BR:aal01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     EP13_08510
Messenger RNA biogenesis [BR:aal03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     EP13_08510
Ribosome biogenesis [BR:aal03009]
 Prokaryotic type
  rRNA processing factors
   EP13_08510
SSDB
Motif
Pfam: RNase_E_G RNase_E_G_Thio S1 DUF6554
Other DBs
NCBI-ProteinID: AIF98720
UniProt: A0A075P1C6
Position
complement(1871751..1875053)
AA seq 1100 aa
MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRVEPSLEAAFVDY
GAERHGFLPLKEIARTYFPKGYRFEGRPNIKDVIKEGQEVIVQIDKEERGQKGAALTTFL
SLAGSYLVLMPNNPRAGGISRRIEGDERTELKESLSKLDLPDGMGLIVRTAGVGKSFEEL
EWDLKVLLKHWDAISGVAAEREAPFLIHQESNVIVRAIRDYLRRDIGEILIDKTSIYEQA
LQHIQLVRPDFANRVKLYRGEVPLFSHYQIESQIESAFQREVRLPSGGSIVIDPTEALTS
IDINSARATKGGDIEETALNTNLEAADEIARQLRLRDLGGLVVIDFIDMTPVRHQREVEN
RMKDAVRSDRARVQLGRISRFGLLEMSRQRLRPSLGESAHHVCPRCSGHGTIRGTESLAL
SILRILEEESIKENTGQIEAQLPVPVATYLLNEKRKSIQLLEKRHGVDLLLIPNANLDTP
HYQVQRRRPDDVVSEASYEVDLMPAVEAETETTTAAPVKREEPALKGLVAPTAAPVVAPK
EAPSKPADVPSLFSRIGKWLSDLFGSEESKEKETKEQQKPASKGHQSRQRNNDDRRRKPR
KNNRRHGQQPQNKEGGDQEQRKPRQDQDEKRNNRNRKPRKAQQPRDEQQTTKPVDKAQSQ
DNSQEPQAQKKREVAERRKRRDTRRSVRVNKDEDTQVQAKNKVPAKAKPVKAMAAEEGNE
KAPKTTKPKANESTPKQEQTQAPKKPKIDETDVIESKAQEEVTPSTPSTQDENANQTQDE
NGQKREGRGRSRRSPRHVRAAGQRRKKDAQNASEDGANVESNDTAQTQAAMPGKLESEVQ
SSETDAPVEPQVAVESTPSNEQSEAQPQAAETPAEATSPAKDVSQAPSEEDSTQADKPGL
LEPASEEAADVVQDELQFDLTSPDADANAKPAKPRVKVPVEAQATPPKQVEIDLNHDGDS
AEAPSAQESSADVAPEVVVEEKAQSSDADVADEKPVTPKSVKTSVINTSLAASSLGKRRA
SHPMTLPASVDDAFTDVALVAKADDTRPAITVCGKQALMRDVVGKASAPTTLPASVDVAS
QHVESAAESDEETESQAANS
NT seq 3303 nt   +upstreamnt  +downstreamnt
atgaaaagaatgttaattaatgcaactcaacaagaagagttgcgagttgccctcgttgat
gggcaacgtttgtatgatttagatattgaaagcccaggacacgagcagaaaaaagccaac
atttacaagggtaaaattactcgcgtagaacctagcttagaagccgcttttgttgattat
ggtgctgagcgccatggctttctccccctcaaagaaattgcccgcacttacttccctaaa
ggttacagattcgaaggtcgtcctaacatcaaggacgttatcaaagaaggccaagaagtt
attgtccaaattgacaaagaagaacgtggccagaaaggggctgcattaaccaccttcttg
tcgttagcgggcagctacctagtattaatgccaaataacccgagagcaggcggtatttct
cgtcgtatcgaaggtgatgagcgtacagagcttaaagaatcattaagcaaacttgatctt
cctgatggcatgggcttaatcgttcgtactgcgggtgtaggcaagtcttttgaagaactt
gagtgggatcttaaagtgctattgaagcactgggatgccatttctggtgtggcagctgag
cgtgaagctcccttccttattcaccaagaaagtaatgttattgtccgtgctattcgtgac
tacttacgtcgcgacattggcgaaatccttatcgacaaaaccagcatatatgaacaagca
ttacagcacattcaattggtacgtcctgacttcgcaaaccgcgtaaaactttaccgtggc
gaagttccattgttcagtcactaccaaattgaaagccaaatagaatcggcatttcaacgt
gaagttcgcttaccgtcaggtggctcaattgttattgatcctaccgaagcactcacctca
attgatatcaactctgcccgcgccacaaaaggcggagatattgaagaaactgcgctgaat
accaacttagaagcagcagacgaaattgcacgtcagctacgcctacgtgatttaggtggc
ttggtggttatcgactttatcgatatgacaccggtaagacaccagcgtgaagttgagaac
cggatgaaagatgcagtacgaagtgaccgtgctcgtgttcaattaggccgtatctctcgc
tttggcttattagaaatgtcacgccaacgcttacgtccttcattgggcgagtcggcacac
catgtgtgtcctcgttgctcaggtcacggcactattcgtggtactgaatctcttgcgctt
tctatcctacgtattcttgaagaagaaagcatcaaagaaaacacggggcaaattgaagcg
cagcttccggtccctgttgccacgtacctgctaaacgaaaagcgtaagtctatccagtta
ctagagaagcgccacggtgtagatttattacttatccctaacgcaaatctagacacgcca
cactatcaagttcagcgccgtcgccctgatgacgtggtgtcagaagcgagctacgaagtt
gatcttatgcctgcggtagaagcagaaacagagaccacaacagccgccccagttaaacga
gaagagcctgcccttaaaggtttagttgcccccaccgcggcacctgttgttgcgcctaaa
gaggcaccatcgaagcctgcagatgtaccttctttgttctctcgtattggtaaatggtta
agcgacctctttggtagcgaagaaagcaaagagaaagaaaccaaggaacagcaaaaaccg
gcaagcaaagggcaccagtcacgtcagcgtaataacgatgacagacgtcgtaagcctcgg
aaaaataaccgtcgtcatggtcagcaaccacaaaacaaagaaggtggtgatcaggaacaa
cgtaagccacgtcaagatcaagacgaaaaacgtaacaaccgcaatcgcaaaccgcgtaag
gcgcagcagccccgtgatgagcaacagaccactaagccggtagataaagcacaaagccaa
gacaacagccaagaaccgcaagcgcagaaaaagcgtgaagttgctgaacgtcgtaagcgt
cgtgatacacgccgcagtgttcgagtgaataaagacgaagatactcaagttcaagctaag
aacaaggtgcccgctaaagcgaagcctgtgaaagcaatggcggctgaggaaggcaacgaa
aaagcgcctaaaacaaccaagccaaaagcgaatgagtcaacccctaagcaagaacagact
caagcgcctaagaagccgaaaatagatgagaccgacgttattgaatctaaggcgcaagaa
gaggtaacgccttctacacctagcacacaagacgaaaatgctaaccagactcaggatgaa
aatggtcagaaacgagaaggcagaggccgctcacgtcgttcacctcgtcatgttcgtgca
gcaggacaacgtcgtaagaaggatgcgcaaaacgcatcagaagacggcgccaatgtagag
tctaacgataccgcgcaaacccaagcagcaatgcccggtaagttagaatcagaggtccag
tcttcagaaacagacgcgcctgttgagccgcaagtcgctgttgagtctacgccaagcaat
gaacaaagcgaagcgcaacctcaagccgctgaaacgccagcagaagctacgtcgccagcg
aaagacgtaagccaagcgccaagtgaagaagactcgacgcaagcagataagcccggtttg
ctagagcctgcaagcgaagaagccgctgatgttgtgcaagacgaacttcagttcgatctt
acttctccagatgctgatgccaatgctaagccagcgaagcctcgggttaaagtgcctgta
gaagcgcaagcaacgccacctaagcaagttgaaatagatttgaatcacgatggcgatagc
gctgaagcaccaagcgcgcaagaaagcagtgctgatgtggccccagaggtggttgtggaa
gaaaaagctcaaagcagtgatgctgacgttgccgacgaaaagccggtaacccctaagtcg
gtgaagacatcggttatcaacacgagtttggcggcaagtagcttaggtaaacgtagggca
tctcaccctatgacattaccggcttcggttgatgatgcatttactgatgtggcactagtg
gcaaaagcagatgatacacgtcctgccatcacggtatgtggcaaacaagcgctaatgcgt
gatgttgttggaaaggcttctgcccctaccacgttgccggcaagcgtagacgtagcctct
caacatgttgagtcggcagctgaaagtgacgaagagactgagtctcaagccgctaacagc
taa

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