KEGG   Alteromonas australica H 17: EP13_08515
Entry
EP13_08515        CDS       T03220                                 
Name
(GenBank) 23S rRNA pseudouridylate synthase
  KO
K06179  23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
Organism
aal  Alteromonas australica H 17
Brite
KEGG Orthology (KO) [BR:aal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:aal03009]
    EP13_08515
Enzymes [BR:aal01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.24  23S rRNA pseudouridine955/2504/2580 synthase
     EP13_08515
Ribosome biogenesis [BR:aal03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    EP13_08515
SSDB
Motif
Pfam: PseudoU_synth_2 S4 GO-like_E_set
Other DBs
NCBI-ProteinID: AIF98721
UniProt: A0A075NYS6
Position
1875790..1876743
AA seq 317 aa
MKEQTPQKVQFVTVDADVAGQRIDNFLRTQLKGVPKSMIYRILRKGEVRVNKGRIKPEYK
LADGDVVRIPPVRVSEGAPAPSPKLDKIASLESHILFEDDRILVMNKPSGIAVHGGSGLS
FGLIEGLRALRPDAKFMELVHRLDRETSGCILIAKKRSALRHMHEQLRTGKMDKRYQALV
AGEWPSTRFKVKAPLRKNTLQSGERMVSVGDDGKPSETRYRILQQFEGATLVEASPITGR
THQIRVHCLHAGHPIGGDPKYGDAEFDNQMRKIGLSRLFLHAHSISLIHPGTEERVKFTA
PLDATLSATLNALSKHA
NT seq 954 nt   +upstreamnt  +downstreamnt
atgaaagaacagactccccaaaaagtacaatttgtaaccgtagacgcagatgtggccggc
cagcgaattgacaattttctgcgcactcaacttaagggtgtgcccaaaagcatgatttac
cgaattttgcgtaaaggcgaagttcgcgtgaataaaggtagaattaaacccgaatacaaa
ttggctgacggcgatgtggtgcggatccctccggtgagggtgtctgagggtgcacctgcg
ccttcgccaaaattagataaaatcgcctcccttgagagccatattttatttgaagatgat
cgtatattggttatgaataaaccttctggcattgcggtgcacggtggcagcggattaagc
tttggtttaattgaagggttaagggcattgcgtcctgatgcgaagtttatggaactcgtg
caccgcctggatagggaaacctcaggctgtattctgattgcgaaaaagcggtcggcattg
cgacacatgcatgaacaattacgtaccggcaaaatggataagcgctatcaagccttagtc
gcaggggagtggccttcaacacggtttaaagtgaaagcgcctctacgtaaaaatacacta
caatcaggtgagcgcatggtgagtgtgggcgacgatggcaagccttctgaaacccgctac
cgcattttgcagcaatttgaaggggctacccttgttgaggcgtcgccgattaccgggcga
actcaccaaatccgcgtgcattgtttacatgcgggccatcccattggcggcgatcctaaa
tacggcgatgctgaatttgataaccaaatgcgtaaaattggcctgagccggttatttctt
cacgcgcacagtatttctcttatccatcctggtactgaggaacgggtgaagtttactgcg
ccattggatgccacattaagcgctacgttaaatgcgcttagcaagcatgcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system