KEGG   Alteromonas australica H 17: EP13_12470
Entry
EP13_12470        CDS       T03220                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
aal  Alteromonas australica H 17
Brite
KEGG Orthology (KO) [BR:aal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aal03021]
    EP13_12470
Transcription machinery [BR:aal03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     EP13_12470
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF GerE F_actin_cap_B DUF1492 HTH_24
Other DBs
NCBI-ProteinID: AIF99429
UniProt: A0A075NXM6
Position
complement(2758856..2759467)
AA seq 203 aa
MLVGIPLEQSNSAIKPKECAVEMSDYLVAVADKRCKRSFSRVFNYFAPRLRSYALKQMGN
EALAMELVQDTMSNVWQKAHLFNAEKGSPSTWIFTIARNIRFDMLRKLQNRKEDVCSDDL
WPVLCEQTADLNEAPLDEQVTLEQIGHLFEALPSKQQAVIESIYIDGKSQQEVADELEIP
LGTVKSRTRLALQRLKGMLHDSE
NT seq 612 nt   +upstreamnt  +downstreamnt
atgttagttggaattccattggaacaaagcaacagtgccattaagcctaaagaatgtgca
gtagaaatgtcggattaccttgtcgctgtagccgacaaacgatgtaagcgttcattttct
cgcgtattcaattacttcgcacctcgcttacgttcttatgctcttaaacaaatgggcaac
gaagctttagcgatggagttagtgcaagacactatgtcgaatgtttggcagaaagcgcac
ttatttaacgctgaaaaaggttcgccttctacgtggattttcaccattgcacgtaacatt
cgtttcgacatgttacgcaagttacagaatcgtaaagaagatgtgtgttcagacgatttg
tggccagtgctttgcgagcaaactgctgacttgaacgaagcccctcttgacgaacaagtg
acattagagcaaattggtcatttgttcgaagcgttgccaagtaagcagcaagccgtgatt
gaatcaatatacatagacggtaaatcacagcaagaagttgcagacgaattagagattcct
ttaggcaccgttaaatcgcgaactcgtttggccttgcaacgccttaaaggtatgttacac
gacagtgaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (15)   

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