KEGG   Aedes albopictus (Asian tiger mosquito): 109410438
Entry
109410438         CDS       T06060                                 
Name
(RefSeq) putative U5 small nuclear ribonucleoprotein 200 kDa helicase
  KO
K12854  pre-mRNA-splicing helicase BRR2 [EC:5.6.2.6]
Organism
aalb  Aedes albopictus (Asian tiger mosquito)
Pathway
aalb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aalb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109410438
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aalb03041]
    109410438
Enzymes [BR:aalb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     109410438
Spliceosome [BR:aalb03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    109410438
 Complex C
   U5 SnRNP specific factors
    109410438
SSDB
Motif
Pfam: Sec63 DEAD Helicase_PWI ResIII Helicase_C BRR2_plug AAA_30 AAA_22 AAA_19 HTH_61 SWI2_SNF2 PhoH nSTAND3 T2SSE
Other DBs
NCBI-GeneID: 109410438
NCBI-ProteinID: XP_029725942
Position
Unknown
AA seq 2143 aa
MADAAARQLQYEYKANSNLVLQADVRLIERPRRDEATGEVLSLVGKLEGTRMGDRAQRTK
PEKTEERKAKRQKRDEAQYDFNSMKGATLLTEGIDEMVGIVYRPKTQETRQTYEVLLSFI
QEAIGDQPRDILCGAADEILAVLKNDKLKDRERKREIDGLLGTVTDERFALLVNLGKKIT
DFGADASSSGGATGVTEGEQIDDTYGINVQFYESEEESDEDKYGEIRDDDVQDEGEEARD
DGILHAENLGGNEESKKEKALDPRDIDAHWLQRCLRKYYNDSIMSQAKAGEVLGVLKDAG
DDRECENQLVLLLGYDCFDFIKLLKKNRQTILYCTMLASSQSESERVKIREKMKGDAFLA
KILRQLDTGKQEMDDYESEKSKMQRRRKEQDDDNMEGIGGQIPGNRNVLELDELAFTQGS
HLMANKRCQLPDGSFRKQRKGYEEVHVPALKPKPFDEEEELMVIDKLPKYVQPVFAGFKT
LNRIQSRLYKTALESDENLLLCAPTGAGKTNVALLTMMREIGKHINDDGTINVDEFKIIY
IAPMRSLVQEMVGNFGKRLATYNLTVSELTGDHQLSREQIAATQVIVCTPEKWDIITRKG
GEKTYTQLVRLVIIDEIHLLHDERGPVLESLVARTIRNIETTQEDVRLVGLSATLPNYHD
VATFLRVRPETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGKNQ
VLVFVHSRKETGKTARAIRDMCLEKDTLGNFLREGSASMEVLRSEADQVKNAELKDLLPY
GFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGR
WVELSALDVLQMLGRAGRPQYDTKGEGILITNHSELQYYLSLLNQQLPIESQLVSKMPDM
LNAEIVLGTIQNVKDAVTWLGYTYLYIRMLRQPTLYGVSYDAIKEDPLLEHFRADLVHTA
ALHLEKSGLIKYDRKSGHFQVTEIGRIASHYYCTHETMLTYNQLLKPTLSEIELFRVFSL
SGEFRNITVREEEKLELQKLMERVPIPIKESMEEPSAKVNVLLQAYISQLKLEGFALMAD
MVYVTQSAARLLRAIFEIVLHREWAQLADKCLTLCKMIDRRMWQSMSPLRQFRKMPEEIV
KKIEKKNFPWERLYDLEANEIGELIRVPKLGKTIYKYVHQFPKLELSTHIQPITRSTLRV
ELTITPDFQWDEKIHGQSEAFWILVEDVDSEVILHHEYFLLKAKYCQDDHLVKFFVPVFE
PLPPQYFLRIVSDRWIGAETQLPVSFRHLILPEKNLPPTELLDLQPLPISALREPNFEGL
YMDKFPQFNPIQTQVFNAVYNSEDNVFVGAPTGSGKTTIAEFAVLRMLQQNPHGRVVYLV
SRDSLAELVFMDWHQKFGQHLGCKVVKLTGETGTDLKLIAKGQIIVTTADKWDILSRRWK
QRKNVQNIQLFIVDELQLIGGEEGPVLEVVCSRMRYISSQIEKQIRIIALSASLSDARDV
AQWLGCNANATFNFHPSVRPVPLELHVQGFNITHNASRVAAMSKPVYNAITKFSPHKPVI
VFVSSRKLARLTAIDILTYCAAEAQPNRFFHAEEEDIKPFLDRMTDKTLKETLSQGVAYI
HEGLTPSDHRIVEQLFDSGAVQIAVVTRDLCWGLNISAYLVVIMDTQFYNGKSHSYDDYP
VTDVMQMVGRANRPLEDDDAKCVLMCQSSKKDFFKKFLNESLPVESHLDHRLHDHFNAEI
VTKTIENKQDAVDYLTWTFLYRRLTQNPNYYNLQGVTHRHLSDHLSELVEGTLSDLEQSK
CISVEDEMDTLPLNLGMIAAYYYINYTTIELFSLSLNSKTKIRGLLEIISSAAEYEDVVV
RHHEDNILKSLAQRLPNKLTGPNGTAPKYNDPHIKTNLLLQAHLSRLQLGAELQGDTEQS
LGKAIRLIQACVDVLSSNGWLSPAVAAMELAQMVTQAMWSKDSYLKQLPHFNADIIKRCQ
EKKIETVFDIMELDDEDRIRLLQLNDQQMSDVARFCNRYPNIEMTFEVVDNDRIHSGSSV
NVVVNLEREDDVTGPVIAPFFPQKREEGWWIVIGDPKTNSLLSIKRLTLQQKAKFKLDFV
APSPGHHDYTLYFMSDSYLGCDQEYTFSINVGDFQSESESESD
NT seq 6432 nt   +upstreamnt  +downstreamnt
atggctgacgcagcggcacgtcagctgcagtacgagtacaaagcgaactcgaatttggtt
ttgcaagcggatgtccgtctgatcgagaggccacgtcgagatgaagctaccggcgaggtg
ctgtcgctggttggaaagctggagggcacgagaatgggagatcgggcacagcgaaccaaa
ccggagaagaccgaggagcggaaggcaaaacgccaaaagcgtgacgaagcgcagtacgac
ttcaacagcatgaagggtgccaccctgctgacggagggaattgacgagatggtcggcata
gtgtaccgcccgaaaacgcaggaaacccgtcagacgtacgaggtgttgctcagcttcatc
caggaggccatcggcgatcagccgagggacatcctgtgcggtgcggccgatgagattttg
gccgtgctgaagaacgacaagctgaaggatcgggaacgaaagcgggagattgacgggctg
ttggggacggtgacggacgagcggtttgctctgttggttaaccttggtaagaagattacc
gacttcggggcggatgcgtcgtcgtcgggtggagcgacgggagtgaccgagggcgagcag
attgacgatacctacgggatcaatgtgcagttctacgagtcggaggaggagagcgacgag
gacaagtacggagagattcgagatgacgatgtgcaggatgagggcgaggaggcccgggac
gatggcattttgcacgctgagaatctcggcggcaacgaggagagcaagaaggagaaggct
ctggaccctcgggacatcgacgcccattggttgcagcgttgtttgcgaaagtactacaac
gattcgattatgtcgcaggccaaggccggcgaagtgctcggtgtcctcaaggatgccggc
gatgatcgggagtgtgagaatcaactggtgctgttactcgggtacgactgtttcgatttc
atcaagctgctgaagaagaaccgtcagacgattttgtactgtacaatgctggcttcgtca
cagagcgagagcgagcgggttaagatccgggagaagatgaagggggatgcgttcttggcg
aagatcttgcggcagttggataccgggaagcaggagatggatgactacgagagcgagaag
tccaagatgcagaggaggagaaaggaacaggatgatgacaatatggagggtattggagga
cagattccggggaacaggaatgtactggagctggacgagttggcgtttacgcagggatcg
catctgatggcaaataagcgttgtcagctgccggacggaagtttccgtaagcaacggaag
gggtacgaggaagttcacgttccggcattgaagccgaaaccatttgacgaggaggaagag
ctgatggtgatcgataagttgcccaagtacgtccagccggtgttcgccgggttcaaaacg
ctgaaccggatccagagccggctgtacaagacggcactggaaagcgacgagaatctgctg
ctgtgtgccccgacgggagccggtaagaccaacgtggccctgctgactatgatgcgagag
atcgggaagcacatcaacgacgatggaacgatcaacgtggatgagttcaagatcatctac
attgctccgatgcgatcgctggtacaggaaatggtgggaaacttcgggaagcgcctggct
acgtacaacctgacggtatcggaactgacgggtgatcatcagttgagtcgggaacagatc
gcggccacgcaagtgatcgtttgtactccggagaagtgggacatcatcacccgaaaagga
ggcgagaagacctacacccaactggtccgcctggtgatcatcgatgaaatccatctgctc
cacgacgaacgtggtccggttctggaatcgttggttgctcgtacaatccggaacatcgaa
accacacaagaggacgtccgtttggtaggcttatctgctaccctgcccaactaccacgac
gtagcgaccttcctgcgcgttcgcccggaaaccggcttgttctacttcgacaacagcttc
cgtcctgtcgccctggagcagcagtacatcggagttaccgagaagaaagccctgaagcgg
ttccaggtcatgaatgacatcgtctacgaaaaggtcatggagcacgccgggaagaaccag
gtcctggtatttgtccactctcgcaaggaaaccggtaaaactgctcgtgccattcgggac
atgtgtctggagaaggacaccctggggaatttccttcgggagggttcagcgagtatggaa
gtcttacgatcggaagctgatcaggtcaaaaacgctgaacttaaagatctgctcccgtac
ggcttcgcgatccatcacgccggtatgacgcgcgttgacagaactctggtcgaagatctg
ttcgccgatcgtcacatccaagtcttagtctctaccgccaccctggcctggggtgtcaac
ttgccggcccacaccgtcatcatcaagggaactcagatctacaaccccgagaagggccgt
tgggtcgaactgagtgctctggacgtccttcagatgctgggtcgtgccggacgacctcag
tacgataccaaaggtgaaggtatcctgatcaccaaccacagcgaactccagtactacctt
tctttgctaaatcaacagctcccgatcgagtcccaactggtttccaagatgcccgacatg
ctcaacgccgaaatagtgctcggaacgatccagaacgtcaaggacgctgtaacttggctc
ggatatacctatctctacatccggatgctccgtcaacccactctctacggcgtctcctat
gatgccatcaaggaagaccccctgttggagcacttccgtgccgatttggtacacactgca
gccctgcacctggagaagagcggcttgatcaagtacgatcgcaagagtggccacttccag
gtcaccgagatcggtcgcatcgcctctcactactactgtacccacgagaccatgttgacc
tacaatcaactcctcaaacccactctcagcgagatcgaactgttccgggtattctcccta
tccggtgagttccgaaacatcaccgtccgcgaagaggaaaaactggaacttcaaaaactc
atggagcgcgtccccatcccgatcaaggaaagcatggaggaacccagcgccaaggtcaac
gtactcctccaagcgtacatctcccaactcaagctggaaggttttgccctgatggccgat
atggtttacgtaacccaatcggcggcgcgtctcctgcgcgccatcttcgagatcgtcctt
catcgcgagtgggcccaactcgccgacaaatgtctcaccctgtgcaagatgatcgatcgt
cgcatgtggcagagtatgtccccgctgcgtcagttccgcaagatgcccgaagagatcgtc
aagaagatcgagaagaagaatttcccctgggagcgtctgtacgacctggaggccaacgag
atcggtgagttgatccgcgtccccaagcttggcaaaacgatctacaagtacgtgcaccag
ttcccgaagctcgaactgtccacccacatccaaccgatcacgagatctacgcttcgggtt
gaacttacgatcaccccggatttccagtgggacgaaaagattcacggtcaatcggaagcg
ttctggatcctggtcgaagacgtcgactcggaagtgatcctccaccacgagtacttcctg
ctgaaggccaagtactgccaggacgatcacctggtcaagttcttcgttccggtgtttgaa
ccgctgcccccgcaatacttcctgaggatcgtgtccgatcgttggatcggcgcagaaacg
caacttccggtgtcgttccgtcatctgatcctgccggagaagaacctcccaccgacggag
ctactcgatctgcagccactgccgatcagtgctcttcgggaaccgaactttgaagggtta
tatatggacaagttcccacagttcaacccgatccagacccaggtgttcaacgccgtctac
aacagcgaggacaatgtgtttgtcggagctccgaccggatccggtaagaccacgatcgcg
gagttcgccgttctcagaatgctgcagcagaacccccacggaagggttgtttacctggtg
tcccgggatagtctcgccgaattggtcttcatggattggcatcagaagtttggacagcat
ctgggctgcaaggtcgtcaagctgaccggtgaaaccggcacggacttgaagctgatcgcc
aagggacagatcatcgttacgacggcggacaagtgggatattctttcgcgtcgatggaag
caaaggaagaacgtccaaaacatccagctgttcatcgttgatgaactgcagttaatcgga
ggagaagagggtccagttctggaagtcgtgtgctcccgtatgcgctacatctcgtctcag
atcgagaagcagatcaggatcatcgctctttcggcgtcgctctcggacgcgagggacgtt
gcccaatggttgggctgtaacgcgaacgcgaccttcaatttccatccgagtgttcgtccg
gtcccgctggagttgcacgttcaaggattcaacataactcacaacgcttcgagggtggcg
gccatgtccaagccggtctacaacgcgatcaccaagttcagtccgcacaaaccggtgatc
gtgtttgtttcgtcgcgcaaactggcccgtctcacagcaattgatatcctgacgtactgc
gcagcggaagctcaaccgaaccggttcttccacgccgaagaggaagacatcaaacctttc
ctcgatcgtatgaccgacaagaccctcaaggaaaccctctcgcagggtgttgcctacatc
cacgaaggcttgacgccgtcagatcaccgcattgtcgaacagctgttcgactccggggcc
gttcagatcgcggtcgtcacccgggacctctgctggggtctgaacatctccgcctatctg
gtggtgatcatggacacccagttctacaacggcaagagccattcctacgatgactatccg
gtcacggacgttatgcagatggtcggtcgggccaatcgccctctggaggacgacgacgcc
aagtgcgtcctgatgtgccagagctccaagaaagacttcttcaagaagttcctcaacgaa
agtctcccagtggaaagccatctcgatcaccgactacacgatcacttcaacgcagaaatt
gtcaccaaaaccatcgagaacaaacaggacgccgtagattatcttacctggacgttcctg
taccggcggttgacccagaacccgaactactacaacctccaaggggtaacccatcgtcac
ctctccgatcacctttcggaactcgtcgaaggcaccctgtccgatctggagcagtccaag
tgcatcagcgtggaggacgaaatggacacactcccactgaatctgggcatgatcgcggca
tactactacatcaactacaccaccatcgaactgttcagcttgtcgctgaacagcaagacc
aagatccgcggactgctggagatcatctcgtcggcggccgaatacgaagacgttgtggtg
cgacaccacgaggacaacattctgaagagtttggcccagaggttgccgaacaagctaacc
ggacccaacggaaccgctcccaaatacaacgaccctcacatcaagaccaacctgctgctt
caggcccatctgtcgcgtctccagctgggtgccgagctgcaaggtgacaccgaacaaagc
ctcggaaaagcgatccgcctcatccaggcttgcgtcgatgtcctctcctccaatggatgg
ctctcgcctgccgtcgcagccatggaactggcccagatggtcacccaggcgatgtggagc
aaagactcctacctgaaacagctaccgcacttcaacgccgatatcatcaaacggtgccag
gagaagaaaatcgaaaccgtgttcgacatcatggagctggacgacgaagaccggatccgg
ttgctacagctgaacgaccagcagatgtccgacgtggcccggttctgcaaccgctatccg
aacattgaaatgaccttcgaggtggtggacaatgatcgtatccattccggctcgtcggtc
aatgtcgtggtcaatctggaacgagaggatgatgtgaccggaccggtgattgcaccattc
ttcccgcagaaacgcgaagaaggctggtggatcgtcatcggggatccgaaaaccaactcg
ctcctgtcgatcaaacggctcaccctgcagcagaaggccaagttcaagctggactttgtg
gcgcccagcccgggccatcacgactacacgctgtactttatgagcgattcctatctgggc
tgcgaccaggagtacacctttagcatcaacgtgggcgacttccagtccgagtcggagagt
gagtccgactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (14)   
   Pfam (14)   
All databases (26)   

Download RDF
DBGET integrated database retrieval system