KEGG   Arenibacter algicola: AREALGSMS7_04885
Entry
AREALGSMS7_04885  CDS       T04973                                 
Symbol
rlmCD
Name
(GenBank) 23S rRNA (uracil-C(5))-methyltransferase RlmCD
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
aalg  Arenibacter algicola
Brite
KEGG Orthology (KO) [BR:aalg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:aalg03009]
    AREALGSMS7_04885 (rlmCD)
Enzymes [BR:aalg01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     AREALGSMS7_04885 (rlmCD)
Ribosome biogenesis [BR:aalg03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    AREALGSMS7_04885 (rlmCD)
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_31 Methyltransf_25 Met_10 MTS Methyltransf_15 Cons_hypoth95 Methyltransf_11 PCMT N6_N4_Mtase TRAM FtsJ PrmA Methyltransf_12 Methyltransf_2 BpsA_C UPF0020 Methyltransf_4
Other DBs
NCBI-ProteinID: ASO08267
UniProt: A0A221V3U0
Position
5698572..5700086
AA seq 504 aa
MLVFSVGKTNLINTNKTLLKSYINPKKFSYFCAMGRKNTRQVFENVEVVDAGAKGKTIGK
APDGRVIFLTNTVPGDVVDVMTTKKRKAYFEGVATKFHTFSNKRTTPVCEHFGVCGGCKW
QDMGYEHQLFYKQKEVENNLRRIGHLELPKTSTILGSKNQYFYRNKMEFSFSDSRWLTLE
EINSGKEIDDKNALGFHIPGMWDKILDIKKCHLQEDPSNAIRLEIKDFAIKNNLSFFNPR
NQWGMLRTVMIRTSSTGEIMVMIQFYEDDLKKRELLMNHLAASFPEITALLYVINQKQND
TIYDQEIICYSGRDHIFEEMEGLQFKINAKSFYQTNSDQAYELYKVTRDFAGLTGNELVY
DLYTGTGTIAQFVAKKAKKVIGIEAVPEAIADAKANAKRNKIDNVDFFVGDMKNVFNPAF
IKEHGRPDLIITDPPRDGMHAAVVQQILSIAPEKVVYVSCNSATQARDLEMMKEDYEILK
VQPVDMFPQTHHVENVVLLEKRTK
NT seq 1515 nt   +upstreamnt  +downstreamnt
atgttagttttcagcgttggaaaaacgaatctaataaatacaaataagactctgttaaaa
agctacataaatcctaaaaaattctcctatttttgcgccatgggcagaaagaatacaaga
caagtttttgaaaacgtagaagtagtagatgcaggagccaaaggcaaaacaataggaaaa
gctcccgacggacgggtgattttcctgaccaacactgtcccaggggatgtggtggatgtt
atgaccaccaaaaaaagaaaggcctatttcgaaggggttgctaccaaattccatactttt
tccaacaaaagaaccactccagtttgtgaacattttggggtatgcggcggatgtaaatgg
caagatatgggctatgagcaccagctgttttataagcaaaaggaggtagagaacaaccta
cgtagaattggccatttggaattgccaaaaaccagtaccatcctaggctctaaaaatcag
tatttctataggaacaaaatggaattttctttttcggatagccgatggttaaccttggag
gaaataaactccggtaaggaaatagacgataaaaatgccctaggatttcatatcccaggt
atgtgggacaaaatattggatattaaaaaatgtcatttgcaggaagatccttccaatgcg
atcaggttggaaataaaggattttgccattaaaaacaatctatcttttttcaaccccagg
aatcaatggggtatgctgcgcacggttatgatacgtacctcctctactggtgaaatcatg
gtcatgatccagttctatgaggacgatttgaaaaaaagggaattattgatgaaccattta
gcagcaagctttccagaaataactgctttgttatatgttatcaatcaaaaacaaaatgac
actatatatgaccaagaaataatatgttattccggacgggatcatatttttgaagaaatg
gagggactacagtttaaaataaatgccaaatccttttatcaaacaaactcggaccaagcc
tatgaactatataaagtaacccgagatttcgccggacttaccggaaatgaattggtttat
gacctttacaccggtacggggaccattgcccaattcgtagccaaaaaagctaaaaaggta
atcggcatagaagctgttcccgaggctattgccgacgccaaggccaatgcaaaaagaaac
aaaatagacaatgtagatttctttgtaggggatatgaagaatgtctttaatcctgctttc
attaaagaacatggtaggccagacctaattattaccgaccctcccagagatggtatgcat
gcggctgttgtgcagcaaatactgtccattgccccagaaaaagtcgtttacgttagctgt
aatagtgccacacaagccagggatttggaaatgatgaaggaggattatgaaatattgaaa
gtgcagcccgtagatatgtttccgcaaacccatcatgttgaaaatgttgtacttttggaa
aaacggaccaaatag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (18)   
   Pfam (18)   
All databases (47)   

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