KEGG   Alternaria alternata: CC77DRAFT_1093697
Entry
CC77DRAFT_1093697 CDS       T05291                                 
Name
(RefSeq) hypothetical protein
  KO
K12881  THO complex subunit 4
Organism
aalt  Alternaria alternata
Pathway
aalt03013  Nucleocytoplasmic transport
aalt03015  mRNA surveillance pathway
aalt03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aalt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CC77DRAFT_1093697
  09122 Translation
   03013 Nucleocytoplasmic transport
    CC77DRAFT_1093697
   03015 mRNA surveillance pathway
    CC77DRAFT_1093697
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aalt03019]
    CC77DRAFT_1093697
   03041 Spliceosome [BR:aalt03041]
    CC77DRAFT_1093697
Messenger RNA biogenesis [BR:aalt03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     CC77DRAFT_1093697
    TREX complex
     CC77DRAFT_1093697
Spliceosome [BR:aalt03041]
 Complex C
  Other components
   EJC/TREX
    CC77DRAFT_1093697
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    CC77DRAFT_1093697
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_occluded IHABP4_N
Other DBs
NCBI-GeneID: 29115287
NCBI-ProteinID: XP_018387678
JGI: 1093697
UniProt: A0A177DRW1
Position
Unknown
AA seq 255 aa
MSSNKMEQSLDDILKASKTSRRGRSGRKSTGTGRPATTAAPVGGVSKSTKQQGRQPKAAP
TAPAASLGGETKIMVSNLPRDIDNAQLQDYFVSAVGVGRPKKVLLQYDAQGRSVGSATII
FNKHDQAAKATAALDGVKIDGRPVRVEMLVSAAAIPATTRPASLADRVTQPKKDKPKPAT
AEKAAPGATRGRGQTRGKGKGRGGREARPKKKTVEELDAEMADYFPGGETNAAAGTAEVA
QITAGGDTAMDDEML
NT seq 768 nt   +upstreamnt  +downstreamnt
atgtcttcaaacaagatggagcagagcctcgacgacatcctcaaggcctccaagacctct
cgccgtggccgcagcggtcgcaagtctaccggcactggacgacctgccaccactgccgca
cctgtaggcggtgtttccaagtcgaccaagcagcagggcaggcagcccaaggccgccccc
accgcacccgccgcctccctcggcggtgagaccaagatcatggtatccaacttgccacgg
gacattgacaatgcccaactccaggactactttgtttcagctgttggtgtaggtcgcccc
aagaaggttcttctccagtacgatgcccagggtcgcagcgtgggtagcgctaccatcatc
ttcaacaagcacgaccaagccgccaaggccacagccgctcttgatggcgtcaagatcgat
ggacgccctgtccgcgtcgagatgctcgtcagcgctgccgctatccctgccactacccgc
ccggcttcgcttgccgaccgtgtaacccaaccaaagaaggacaagccaaagcccgccacc
gccgagaaggcagctcccggtgccacacgcggacgtggtcaaactcgtggcaagggcaag
ggccgtggaggtcgcgaggcccgtcccaagaagaagactgttgaggagctcgatgctgag
atggccgactacttccctggtggcgagaccaatgctgccgctggtactgctgaagttgct
cagatcaccgccggcggtgacactgccatggatgatgagatgctctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (19)   

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